ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1KD1:A1937:A1943

Extra

PDB:
ATOM 1 O3' C A1936 105.331 135.136 127.754 1.00 56.75 O
ATOM 2 P A A1937 104.328 135.830 128.820 1.00 56.57 P
ATOM 3 OP1 A A1937 104.951 137.105 129.239 1.00 57.53 O
ATOM 4 OP2 A A1937 103.902 134.844 129.843 1.00 54.68 O
ATOM 5 O5' A A1937 103.051 136.261 127.986 1.00 57.85 O
ATOM 6 C5' A A1937 103.123 137.315 127.002 1.00 57.48 C
ATOM 7 C4' A A1937 101.835 137.364 126.236 1.00 56.84 C
ATOM 8 O4' A A1937 101.688 136.143 125.467 1.00 57.48 O
ATOM 9 C3' A A1937 100.631 137.385 127.150 1.00 55.62 C
ATOM 10 O3' A A1937 100.339 138.693 127.578 1.00 54.20 O
ATOM 11 C2' A A1937 99.546 136.755 126.299 1.00 56.40 C
ATOM 12 O2' A A1937 98.921 137.682 125.429 1.00 54.72 O
ATOM 13 C1' A A1937 100.346 135.707 125.522 1.00 57.87 C
ATOM 14 N9 A A1937 100.324 134.413 126.202 1.00 60.09 N
ATOM 15 C8 A A1937 101.179 133.938 127.166 1.00 60.76 C
ATOM 16 N7 A A1937 100.890 132.730 127.577 1.00 61.75 N
ATOM 17 C5 A A1937 99.773 132.387 126.836 1.00 62.23 C
ATOM 18 C6 A A1937 98.991 131.229 126.798 1.00 63.31 C
ATOM 19 N6 A A1937 99.232 130.143 127.529 1.00 64.40 N
ATOM 20 N1 A A1937 97.937 131.215 125.962 1.00 64.40 N
ATOM 21 C2 A A1937 97.705 132.295 125.204 1.00 63.99 C
ATOM 22 N3 A A1937 98.377 133.435 125.139 1.00 62.23 N
ATOM 23 C4 A A1937 99.410 133.417 125.991 1.00 61.89 C
ATOM 24 P U A1938 99.741 138.923 129.046 1.00 53.94 P
ATOM 25 OP1 U A1938 99.636 140.381 129.252 1.00 52.51 O
ATOM 26 OP2 U A1938 100.484 138.084 130.026 1.00 54.45 O
ATOM 27 O5' U A1938 98.261 138.377 128.930 1.00 52.44 O
TER

ATOM 1 O3' U B1942 92.999 125.162 118.079 1.00 38.71 O
ATOM 2 P A B1943 94.426 125.749 117.626 1.00 40.95 P
ATOM 3 OP1 A B1943 94.826 124.973 116.428 1.00 40.36 O
ATOM 4 OP2 A B1943 95.352 125.836 118.778 1.00 41.74 O
ATOM 5 O5' A B1943 94.089 127.241 117.201 1.00 41.33 O
ATOM 6 C5' A B1943 93.068 127.537 116.245 1.00 38.94 C
ATOM 7 C4' A B1943 93.081 129.009 115.956 1.00 37.57 C
ATOM 8 O4' A B1943 92.644 129.723 117.134 1.00 35.66 O
ATOM 9 C3' A B1943 94.446 129.595 115.623 1.00 36.45 C
ATOM 10 O3' A B1943 94.734 129.460 114.244 1.00 36.79 O
ATOM 11 C2' A B1943 94.273 131.052 116.012 1.00 36.30 C
ATOM 12 O2' A B1943 93.674 131.823 114.997 1.00 39.20 O
ATOM 13 C1' A B1943 93.334 130.946 117.213 1.00 35.95 C
ATOM 14 N9 A B1943 94.107 130.960 118.443 1.00 35.78 N
ATOM 15 C8 A B1943 94.177 130.059 119.469 1.00 35.99 C
ATOM 16 N7 A B1943 94.984 130.425 120.428 1.00 35.85 N
ATOM 17 C5 A B1943 95.480 131.646 119.999 1.00 35.81 C
ATOM 18 C6 A B1943 96.386 132.553 120.564 1.00 36.01 C
ATOM 19 N6 A B1943 96.988 132.373 121.737 1.00 37.99 N
ATOM 20 N1 A B1943 96.666 133.669 119.871 1.00 35.55 N
ATOM 21 C2 A B1943 96.079 133.853 118.686 1.00 37.46 C
ATOM 22 N3 A B1943 95.218 133.076 118.051 1.00 37.95 N
ATOM 23 C4 A B1943 94.956 131.978 118.776 1.00 36.31 C
ATOM 24 P G B1944 96.238 129.212 113.752 1.00 37.93 P
ATOM 25 OP1 G B1944 96.266 129.421 112.296 1.00 38.41 O
ATOM 26 OP2 G B1944 96.699 127.917 114.315 1.00 39.00 O
ATOM 27 O5' G B1944 97.054 130.433 114.342 1.00 38.95 O
TER

Atoms:
OP1: (104.951,137.105,129.239)
OP2: (103.902,134.844,129.843)
C3': (100.631,137.385,127.150)
C1': (100.346,135.707,125.522)
C5': (103.123,137.315,127.002)
O4': (101.688,136.143,125.467)
C8: (101.179,133.938,127.166)
O2': (98.921,137.682,125.429)
C6: (98.991,131.229,126.798)
C5: (99.773,132.387,126.836)
C4: (99.410,133.417,125.991)
P: (104.328,135.830,128.820)
C4': (101.835,137.364,126.236)
C2': (99.546,136.755,126.299)
C2: (97.705,132.295,125.204)
N1: (97.937,131.215,125.962)
N3: (98.377,133.435,125.139)
N6: (99.232,130.143,127.529)
N7: (100.890,132.730,127.577)
N9: (100.324,134.413,126.202)
O5': (103.051,136.261,127.986)
O3': (100.339,138.693,127.578)
OP1: (94.826,124.973,116.428)
OP2: (95.352,125.836,118.778)
C3': (94.446,129.595,115.623)
C1': (93.334,130.946,117.213)
C5': (93.068,127.537,116.245)
O4': (92.644,129.723,117.134)
C8: (94.177,130.059,119.469)
O2': (93.674,131.823,114.997)
C6: (96.386,132.553,120.564)
C5: (95.480,131.646,119.999)
C4: (94.956,131.978,118.776)
P: (94.426,125.749,117.626)
C4': (93.081,129.009,115.956)
C2': (94.273,131.052,116.012)
C2: (96.079,133.853,118.686)
N1: (96.666,133.669,119.871)
N3: (95.218,133.076,118.051)
N6: (96.988,132.373,121.737)
N7: (94.984,130.425,120.428)
N9: (94.107,130.960,118.443)
O5': (94.089,127.241,117.201)
O3': (94.734,129.460,114.244)
Image (generated by PyMOL):
PyMOL image
show in jmol