ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQ5:02041:02490

Extra

PDB:
ATOM 1 O3' G A2040 51.740 127.856 106.178 1.00 34.05 O
ATOM 2 P A A2041 52.289 127.793 104.669 1.00 34.35 P
ATOM 3 OP1 A A2041 52.846 126.434 104.484 1.00 32.81 O
ATOM 4 OP2 A A2041 53.142 128.966 104.386 1.00 33.11 O
ATOM 5 O5' A A2041 50.973 127.948 103.790 1.00 34.91 O
ATOM 6 C5' A A2041 49.802 127.158 104.059 1.00 32.68 C
ATOM 7 C4' A A2041 48.625 127.691 103.278 1.00 32.06 C
ATOM 8 O4' A A2041 48.330 129.048 103.695 1.00 31.51 O
ATOM 9 C3' A A2041 48.822 127.802 101.775 1.00 32.40 C
ATOM 10 O3' A A2041 48.557 126.551 101.159 1.00 34.06 O
ATOM 11 C2' A A2041 47.767 128.831 101.387 1.00 33.42 C
ATOM 12 O2' A A2041 46.475 128.262 101.286 1.00 34.74 O
ATOM 13 C1' A A2041 47.796 129.774 102.596 1.00 34.00 C
ATOM 14 N9 A A2041 48.581 130.999 102.403 1.00 36.24 N
ATOM 15 C8 A A2041 49.840 131.290 102.877 1.00 36.14 C
ATOM 16 N7 A A2041 50.263 132.486 102.553 1.00 35.95 N
ATOM 17 C5 A A2041 49.220 133.019 101.808 1.00 36.50 C
ATOM 18 C6 A A2041 49.049 134.258 101.163 1.00 35.16 C
ATOM 19 N6 A A2041 49.960 135.236 101.167 1.00 32.30 N
ATOM 20 N1 A A2041 47.891 134.461 100.501 1.00 34.67 N
ATOM 21 C2 A A2041 46.980 133.489 100.488 1.00 34.16 C
ATOM 22 N3 A A2041 47.022 132.291 101.049 1.00 35.38 N
ATOM 23 C4 A A2041 48.181 132.112 101.703 1.00 36.11 C
ATOM 24 P A A2042 49.262 126.171 99.773 1.00 34.43 P
ATOM 25 OP1 A A2042 49.253 127.378 98.901 1.00 37.08 O
ATOM 26 OP2 A A2042 48.642 124.921 99.288 1.00 32.69 O
ATOM 27 O5' A A2042 50.761 125.837 100.193 1.00 36.61 O
TER

ATOM 1 O3' U B2489 52.948 145.863 97.929 1.00 39.19 O
ATOM 2 P A B2490 52.055 145.114 99.034 1.00 39.46 P
ATOM 3 OP1 A B2490 51.060 146.071 99.562 1.00 40.66 O
ATOM 4 OP2 A B2490 52.969 144.438 99.969 1.00 41.01 O
ATOM 5 O5' A B2490 51.225 144.072 98.160 1.00 42.40 O
ATOM 6 C5' A B2490 51.280 142.682 98.409 1.00 39.74 C
ATOM 7 C4' A B2490 49.902 142.148 98.704 1.00 40.35 C
ATOM 8 O4' A B2490 50.115 140.871 99.344 1.00 41.14 O
ATOM 9 C3' A B2490 49.087 142.929 99.733 1.00 42.75 C
ATOM 10 O3' A B2490 47.742 142.447 99.745 1.00 44.11 O
ATOM 11 C2' A B2490 49.760 142.501 101.033 1.00 42.80 C
ATOM 12 O2' A B2490 48.912 142.597 102.159 1.00 46.04 O
ATOM 13 C1' A B2490 50.077 141.031 100.748 1.00 41.43 C
ATOM 14 N9 A B2490 51.373 140.624 101.284 1.00 39.73 N
ATOM 15 C8 A B2490 52.603 141.168 101.024 1.00 37.12 C
ATOM 16 N7 A B2490 53.577 140.615 101.700 1.00 38.62 N
ATOM 17 C5 A B2490 52.948 139.636 102.452 1.00 37.80 C
ATOM 18 C6 A B2490 53.426 138.721 103.395 1.00 36.83 C
ATOM 19 N6 A B2490 54.696 138.657 103.785 1.00 37.43 N
ATOM 20 N1 A B2490 52.540 137.869 103.946 1.00 38.74 N
ATOM 21 C2 A B2490 51.254 137.955 103.581 1.00 39.00 C
ATOM 22 N3 A B2490 50.680 138.789 102.727 1.00 38.32 N
ATOM 23 C4 A B2490 51.593 139.615 102.188 1.00 38.72 C
ATOM 24 P U B2491 46.540 143.303 99.096 1.00 46.16 P
ATOM 25 OP1 U B2491 47.073 144.184 98.025 1.00 46.01 O
ATOM 26 OP2 U B2491 45.752 143.892 100.194 1.00 43.18 O
ATOM 27 O5' U B2491 45.659 142.132 98.462 1.00 44.57 O
TER

Atoms:
OP1: (52.846,126.434,104.484)
OP2: (53.142,128.966,104.386)
C3': (48.822,127.802,101.775)
C1': (47.796,129.774,102.596)
C5': (49.802,127.158,104.059)
O4': (48.330,129.048,103.695)
C8: (49.840,131.290,102.877)
O2': (46.475,128.262,101.286)
C6: (49.049,134.258,101.163)
C5: (49.220,133.019,101.808)
C4: (48.181,132.112,101.703)
P: (52.289,127.793,104.669)
C4': (48.625,127.691,103.278)
C2': (47.767,128.831,101.387)
C2: (46.980,133.489,100.488)
N1: (47.891,134.461,100.501)
N3: (47.022,132.291,101.049)
N6: (49.960,135.236,101.167)
N7: (50.263,132.486,102.553)
N9: (48.581,130.999,102.403)
O5': (50.973,127.948,103.790)
O3': (48.557,126.551,101.159)
OP1: (51.060,146.071,99.562)
OP2: (52.969,144.438,99.969)
C3': (49.087,142.929,99.733)
C1': (50.077,141.031,100.748)
C5': (51.280,142.682,98.409)
O4': (50.115,140.871,99.344)
C8: (52.603,141.168,101.024)
O2': (48.912,142.597,102.159)
C6: (53.426,138.721,103.395)
C5: (52.948,139.636,102.452)
C4: (51.593,139.615,102.188)
P: (52.055,145.114,99.034)
C4': (49.902,142.148,98.704)
C2': (49.760,142.501,101.033)
C2: (51.254,137.955,103.581)
N1: (52.540,137.869,103.946)
N3: (50.680,138.789,102.727)
N6: (54.696,138.657,103.785)
N7: (53.577,140.615,101.700)
N9: (51.373,140.624,101.284)
O5': (51.225,144.072,98.160)
O3': (47.742,142.447,99.745)
Image (generated by PyMOL):
PyMOL image
show in jmol