Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQ6:02041:02490
Extra
PDB:
ATOM 1 O3' G A2040 51.940 127.857 105.982 1.00 41.58 O
ATOM 2 P A A2041 52.446 127.758 104.457 1.00 38.70 P
ATOM 3 OP1 A A2041 52.919 126.371 104.265 1.00 39.67 O
ATOM 4 OP2 A A2041 53.345 128.884 104.142 1.00 40.88 O
ATOM 5 O5' A A2041 51.124 127.963 103.596 1.00 40.83 O
ATOM 6 C5' A A2041 50.008 127.074 103.741 1.00 39.52 C
ATOM 7 C4' A A2041 48.818 127.611 102.992 1.00 39.17 C
ATOM 8 O4' A A2041 48.566 128.969 103.424 1.00 39.34 O
ATOM 9 C3' A A2041 48.972 127.742 101.487 1.00 40.49 C
ATOM 10 O3' A A2041 48.690 126.508 100.849 1.00 41.59 O
ATOM 11 C2' A A2041 47.900 128.765 101.148 1.00 40.45 C
ATOM 12 O2' A A2041 46.609 128.182 101.117 1.00 40.20 O
ATOM 13 C1' A A2041 47.985 129.703 102.356 1.00 41.40 C
ATOM 14 N9 A A2041 48.757 130.931 102.137 1.00 41.75 N
ATOM 15 C8 A A2041 50.030 131.226 102.561 1.00 41.01 C
ATOM 16 N7 A A2041 50.435 132.425 102.226 1.00 40.22 N
ATOM 17 C5 A A2041 49.361 132.956 101.525 1.00 40.58 C
ATOM 18 C6 A A2041 49.162 134.196 100.898 1.00 39.35 C
ATOM 19 N6 A A2041 50.078 135.170 100.867 1.00 38.03 N
ATOM 20 N1 A A2041 47.973 134.406 100.292 1.00 37.62 N
ATOM 21 C2 A A2041 47.064 133.434 100.312 1.00 37.23 C
ATOM 22 N3 A A2041 47.134 132.230 100.859 1.00 39.24 N
ATOM 23 C4 A A2041 48.322 132.048 101.459 1.00 41.11 C
ATOM 24 P A A2042 49.405 126.142 99.463 1.00 40.53 P
ATOM 25 OP1 A A2042 49.427 127.343 98.580 1.00 42.00 O
ATOM 26 OP2 A A2042 48.753 124.903 98.991 1.00 40.23 O
ATOM 27 O5' A A2042 50.901 125.796 99.893 1.00 41.90 O
TER
ATOM 1 O3' U B2489 53.041 145.804 97.716 1.00 42.36 O
ATOM 2 P A B2490 52.180 145.067 98.845 1.00 40.11 P
ATOM 3 OP1 A B2490 51.289 146.060 99.468 1.00 43.98 O
ATOM 4 OP2 A B2490 53.120 144.305 99.691 1.00 43.05 O
ATOM 5 O5' A B2490 51.241 144.096 98.000 1.00 43.43 O
ATOM 6 C5' A B2490 51.337 142.689 98.127 1.00 43.35 C
ATOM 7 C4' A B2490 49.993 142.103 98.471 1.00 45.95 C
ATOM 8 O4' A B2490 50.256 140.828 99.102 1.00 47.75 O
ATOM 9 C3' A B2490 49.167 142.858 99.509 1.00 48.41 C
ATOM 10 O3' A B2490 47.823 142.373 99.485 1.00 48.09 O
ATOM 11 C2' A B2490 49.830 142.418 100.810 1.00 48.46 C
ATOM 12 O2' A B2490 48.965 142.468 101.925 1.00 51.47 O
ATOM 13 C1' A B2490 50.180 140.962 100.506 1.00 47.45 C
ATOM 14 N9 A B2490 51.470 140.577 101.067 1.00 46.50 N
ATOM 15 C8 A B2490 52.692 141.153 100.845 1.00 45.28 C
ATOM 16 N7 A B2490 53.665 140.601 101.523 1.00 47.05 N
ATOM 17 C5 A B2490 53.042 139.589 102.237 1.00 46.26 C
ATOM 18 C6 A B2490 53.524 138.648 103.153 1.00 45.03 C
ATOM 19 N6 A B2490 54.796 138.576 103.541 1.00 46.08 N
ATOM 20 N1 A B2490 52.643 137.773 103.674 1.00 45.39 N
ATOM 21 C2 A B2490 51.361 137.856 103.304 1.00 46.36 C
ATOM 22 N3 A B2490 50.785 138.703 102.464 1.00 46.37 N
ATOM 23 C4 A B2490 51.692 139.555 101.956 1.00 46.83 C
ATOM 24 P U B2491 46.656 143.208 98.757 1.00 45.61 P
ATOM 25 OP1 U B2491 47.244 144.039 97.667 1.00 46.08 O
ATOM 26 OP2 U B2491 45.847 143.849 99.812 1.00 45.66 O
ATOM 27 O5' U B2491 45.775 142.032 98.135 1.00 47.17 O
TER
ATOM 2 P A A2041 52.446 127.758 104.457 1.00 38.70 P
ATOM 3 OP1 A A2041 52.919 126.371 104.265 1.00 39.67 O
ATOM 4 OP2 A A2041 53.345 128.884 104.142 1.00 40.88 O
ATOM 5 O5' A A2041 51.124 127.963 103.596 1.00 40.83 O
ATOM 6 C5' A A2041 50.008 127.074 103.741 1.00 39.52 C
ATOM 7 C4' A A2041 48.818 127.611 102.992 1.00 39.17 C
ATOM 8 O4' A A2041 48.566 128.969 103.424 1.00 39.34 O
ATOM 9 C3' A A2041 48.972 127.742 101.487 1.00 40.49 C
ATOM 10 O3' A A2041 48.690 126.508 100.849 1.00 41.59 O
ATOM 11 C2' A A2041 47.900 128.765 101.148 1.00 40.45 C
ATOM 12 O2' A A2041 46.609 128.182 101.117 1.00 40.20 O
ATOM 13 C1' A A2041 47.985 129.703 102.356 1.00 41.40 C
ATOM 14 N9 A A2041 48.757 130.931 102.137 1.00 41.75 N
ATOM 15 C8 A A2041 50.030 131.226 102.561 1.00 41.01 C
ATOM 16 N7 A A2041 50.435 132.425 102.226 1.00 40.22 N
ATOM 17 C5 A A2041 49.361 132.956 101.525 1.00 40.58 C
ATOM 18 C6 A A2041 49.162 134.196 100.898 1.00 39.35 C
ATOM 19 N6 A A2041 50.078 135.170 100.867 1.00 38.03 N
ATOM 20 N1 A A2041 47.973 134.406 100.292 1.00 37.62 N
ATOM 21 C2 A A2041 47.064 133.434 100.312 1.00 37.23 C
ATOM 22 N3 A A2041 47.134 132.230 100.859 1.00 39.24 N
ATOM 23 C4 A A2041 48.322 132.048 101.459 1.00 41.11 C
ATOM 24 P A A2042 49.405 126.142 99.463 1.00 40.53 P
ATOM 25 OP1 A A2042 49.427 127.343 98.580 1.00 42.00 O
ATOM 26 OP2 A A2042 48.753 124.903 98.991 1.00 40.23 O
ATOM 27 O5' A A2042 50.901 125.796 99.893 1.00 41.90 O
TER
ATOM 1 O3' U B2489 53.041 145.804 97.716 1.00 42.36 O
ATOM 2 P A B2490 52.180 145.067 98.845 1.00 40.11 P
ATOM 3 OP1 A B2490 51.289 146.060 99.468 1.00 43.98 O
ATOM 4 OP2 A B2490 53.120 144.305 99.691 1.00 43.05 O
ATOM 5 O5' A B2490 51.241 144.096 98.000 1.00 43.43 O
ATOM 6 C5' A B2490 51.337 142.689 98.127 1.00 43.35 C
ATOM 7 C4' A B2490 49.993 142.103 98.471 1.00 45.95 C
ATOM 8 O4' A B2490 50.256 140.828 99.102 1.00 47.75 O
ATOM 9 C3' A B2490 49.167 142.858 99.509 1.00 48.41 C
ATOM 10 O3' A B2490 47.823 142.373 99.485 1.00 48.09 O
ATOM 11 C2' A B2490 49.830 142.418 100.810 1.00 48.46 C
ATOM 12 O2' A B2490 48.965 142.468 101.925 1.00 51.47 O
ATOM 13 C1' A B2490 50.180 140.962 100.506 1.00 47.45 C
ATOM 14 N9 A B2490 51.470 140.577 101.067 1.00 46.50 N
ATOM 15 C8 A B2490 52.692 141.153 100.845 1.00 45.28 C
ATOM 16 N7 A B2490 53.665 140.601 101.523 1.00 47.05 N
ATOM 17 C5 A B2490 53.042 139.589 102.237 1.00 46.26 C
ATOM 18 C6 A B2490 53.524 138.648 103.153 1.00 45.03 C
ATOM 19 N6 A B2490 54.796 138.576 103.541 1.00 46.08 N
ATOM 20 N1 A B2490 52.643 137.773 103.674 1.00 45.39 N
ATOM 21 C2 A B2490 51.361 137.856 103.304 1.00 46.36 C
ATOM 22 N3 A B2490 50.785 138.703 102.464 1.00 46.37 N
ATOM 23 C4 A B2490 51.692 139.555 101.956 1.00 46.83 C
ATOM 24 P U B2491 46.656 143.208 98.757 1.00 45.61 P
ATOM 25 OP1 U B2491 47.244 144.039 97.667 1.00 46.08 O
ATOM 26 OP2 U B2491 45.847 143.849 99.812 1.00 45.66 O
ATOM 27 O5' U B2491 45.775 142.032 98.135 1.00 47.17 O
TER
Atoms:
OP1: (52.919,126.371,104.265)
OP2: (53.345,128.884,104.142)
C3': (48.972,127.742,101.487)
C1': (47.985,129.703,102.356)
C5': (50.008,127.074,103.741)
O4': (48.566,128.969,103.424)
C8: (50.030,131.226,102.561)
O2': (46.609,128.182,101.117)
C6: (49.162,134.196,100.898)
C5: (49.361,132.956,101.525)
C4: (48.322,132.048,101.459)
P: (52.446,127.758,104.457)
C4': (48.818,127.611,102.992)
C2': (47.900,128.765,101.148)
C2: (47.064,133.434,100.312)
N1: (47.973,134.406,100.292)
N3: (47.134,132.230,100.859)
N6: (50.078,135.170,100.867)
N7: (50.435,132.425,102.226)
N9: (48.757,130.931,102.137)
O5': (51.124,127.963,103.596)
O3': (48.690,126.508,100.849)
OP2: (53.345,128.884,104.142)
C3': (48.972,127.742,101.487)
C1': (47.985,129.703,102.356)
C5': (50.008,127.074,103.741)
O4': (48.566,128.969,103.424)
C8: (50.030,131.226,102.561)
O2': (46.609,128.182,101.117)
C6: (49.162,134.196,100.898)
C5: (49.361,132.956,101.525)
C4: (48.322,132.048,101.459)
P: (52.446,127.758,104.457)
C4': (48.818,127.611,102.992)
C2': (47.900,128.765,101.148)
C2: (47.064,133.434,100.312)
N1: (47.973,134.406,100.292)
N3: (47.134,132.230,100.859)
N6: (50.078,135.170,100.867)
N7: (50.435,132.425,102.226)
N9: (48.757,130.931,102.137)
O5': (51.124,127.963,103.596)
O3': (48.690,126.508,100.849)
OP1: (51.289,146.060,99.468)
OP2: (53.120,144.305,99.691)
C3': (49.167,142.858,99.509)
C1': (50.180,140.962,100.506)
C5': (51.337,142.689,98.127)
O4': (50.256,140.828,99.102)
C8: (52.692,141.153,100.845)
O2': (48.965,142.468,101.925)
C6: (53.524,138.648,103.153)
C5: (53.042,139.589,102.237)
C4: (51.692,139.555,101.956)
P: (52.180,145.067,98.845)
C4': (49.993,142.103,98.471)
C2': (49.830,142.418,100.810)
C2: (51.361,137.856,103.304)
N1: (52.643,137.773,103.674)
N3: (50.785,138.703,102.464)
N6: (54.796,138.576,103.541)
N7: (53.665,140.601,101.523)
N9: (51.470,140.577,101.067)
O5': (51.241,144.096,98.000)
O3': (47.823,142.373,99.485)
OP2: (53.120,144.305,99.691)
C3': (49.167,142.858,99.509)
C1': (50.180,140.962,100.506)
C5': (51.337,142.689,98.127)
O4': (50.256,140.828,99.102)
C8: (52.692,141.153,100.845)
O2': (48.965,142.468,101.925)
C6: (53.524,138.648,103.153)
C5: (53.042,139.589,102.237)
C4: (51.692,139.555,101.956)
P: (52.180,145.067,98.845)
C4': (49.993,142.103,98.471)
C2': (49.830,142.418,100.810)
C2: (51.361,137.856,103.304)
N1: (52.643,137.773,103.674)
N3: (50.785,138.703,102.464)
N6: (54.796,138.576,103.541)
N7: (53.665,140.601,101.523)
N9: (51.470,140.577,101.067)
O5': (51.241,144.096,98.000)
O3': (47.823,142.373,99.485)
Image (generated by PyMOL):