Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQ9:02041:02490
Extra
PDB:
ATOM 1 O3' G A2040 52.368 127.099 105.886 1.00 31.93 O
ATOM 2 P A A2041 52.778 127.007 104.332 1.00 32.78 P
ATOM 3 OP1 A A2041 53.275 125.616 104.117 1.00 31.91 O
ATOM 4 OP2 A A2041 53.636 128.163 103.948 1.00 31.00 O
ATOM 5 O5' A A2041 51.406 127.208 103.557 1.00 30.75 O
ATOM 6 C5' A A2041 50.303 126.310 103.741 1.00 30.45 C
ATOM 7 C4' A A2041 49.102 126.819 102.978 1.00 30.38 C
ATOM 8 O4' A A2041 48.842 128.190 103.376 1.00 30.16 O
ATOM 9 C3' A A2041 49.267 126.913 101.469 1.00 30.85 C
ATOM 10 O3' A A2041 48.982 125.659 100.861 1.00 31.61 O
ATOM 11 C2' A A2041 48.219 127.952 101.090 1.00 31.47 C
ATOM 12 O2' A A2041 46.912 127.396 101.088 1.00 35.09 O
ATOM 13 C1' A A2041 48.313 128.917 102.271 1.00 29.99 C
ATOM 14 N9 A A2041 49.124 130.117 102.057 1.00 27.61 N
ATOM 15 C8 A A2041 50.383 130.373 102.533 1.00 26.88 C
ATOM 16 N7 A A2041 50.832 131.569 102.225 1.00 28.11 N
ATOM 17 C5 A A2041 49.806 132.131 101.482 1.00 26.58 C
ATOM 18 C6 A A2041 49.659 133.387 100.871 1.00 26.91 C
ATOM 19 N6 A A2041 50.580 134.350 100.924 1.00 27.37 N
ATOM 20 N1 A A2041 48.514 133.631 100.199 1.00 27.41 N
ATOM 21 C2 A A2041 47.580 132.677 100.163 1.00 26.88 C
ATOM 22 N3 A A2041 47.596 131.461 100.707 1.00 29.09 N
ATOM 23 C4 A A2041 48.752 131.245 101.359 1.00 28.12 C
ATOM 24 P A A2042 49.685 125.270 99.473 1.00 32.72 P
ATOM 25 OP1 A A2042 49.680 126.497 98.615 1.00 32.05 O
ATOM 26 OP2 A A2042 49.066 124.021 98.972 1.00 32.68 O
ATOM 27 O5' A A2042 51.175 124.908 99.892 1.00 29.93 O
TER
ATOM 1 O3' U B2489 53.262 145.058 97.613 1.00 36.06 O
ATOM 2 P A B2490 52.442 144.236 98.719 1.00 36.13 P
ATOM 3 OP1 A B2490 51.396 145.148 99.281 1.00 37.04 O
ATOM 4 OP2 A B2490 53.436 143.612 99.620 1.00 37.00 O
ATOM 5 O5' A B2490 51.671 143.147 97.851 1.00 36.58 O
ATOM 6 C5' A B2490 51.723 141.768 98.178 1.00 34.07 C
ATOM 7 C4' A B2490 50.338 141.253 98.469 1.00 34.86 C
ATOM 8 O4' A B2490 50.504 139.989 99.156 1.00 36.37 O
ATOM 9 C3' A B2490 49.541 142.096 99.456 1.00 35.33 C
ATOM 10 O3' A B2490 48.178 141.694 99.430 1.00 35.98 O
ATOM 11 C2' A B2490 50.169 141.685 100.786 1.00 36.45 C
ATOM 12 O2' A B2490 49.313 141.857 101.897 1.00 40.15 O
ATOM 13 C1' A B2490 50.457 140.198 100.554 1.00 35.28 C
ATOM 14 N9 A B2490 51.754 139.804 101.100 1.00 33.82 N
ATOM 15 C8 A B2490 52.958 140.442 100.942 1.00 31.00 C
ATOM 16 N7 A B2490 53.940 139.879 101.597 1.00 33.16 N
ATOM 17 C5 A B2490 53.347 138.794 102.223 1.00 31.53 C
ATOM 18 C6 A B2490 53.850 137.819 103.084 1.00 31.81 C
ATOM 19 N6 A B2490 55.111 137.808 103.522 1.00 31.40 N
ATOM 20 N1 A B2490 53.002 136.852 103.510 1.00 31.16 N
ATOM 21 C2 A B2490 51.731 136.900 103.112 1.00 29.63 C
ATOM 22 N3 A B2490 51.131 137.786 102.326 1.00 31.10 N
ATOM 23 C4 A B2490 52.007 138.719 101.907 1.00 32.86 C
ATOM 24 P U B2491 47.110 142.466 98.505 1.00 37.81 P
ATOM 25 OP1 U B2491 47.789 143.122 97.359 1.00 35.65 O
ATOM 26 OP2 U B2491 46.230 143.262 99.402 1.00 37.12 O
ATOM 27 O5' U B2491 46.239 141.262 97.922 1.00 37.31 O
TER
ATOM 2 P A A2041 52.778 127.007 104.332 1.00 32.78 P
ATOM 3 OP1 A A2041 53.275 125.616 104.117 1.00 31.91 O
ATOM 4 OP2 A A2041 53.636 128.163 103.948 1.00 31.00 O
ATOM 5 O5' A A2041 51.406 127.208 103.557 1.00 30.75 O
ATOM 6 C5' A A2041 50.303 126.310 103.741 1.00 30.45 C
ATOM 7 C4' A A2041 49.102 126.819 102.978 1.00 30.38 C
ATOM 8 O4' A A2041 48.842 128.190 103.376 1.00 30.16 O
ATOM 9 C3' A A2041 49.267 126.913 101.469 1.00 30.85 C
ATOM 10 O3' A A2041 48.982 125.659 100.861 1.00 31.61 O
ATOM 11 C2' A A2041 48.219 127.952 101.090 1.00 31.47 C
ATOM 12 O2' A A2041 46.912 127.396 101.088 1.00 35.09 O
ATOM 13 C1' A A2041 48.313 128.917 102.271 1.00 29.99 C
ATOM 14 N9 A A2041 49.124 130.117 102.057 1.00 27.61 N
ATOM 15 C8 A A2041 50.383 130.373 102.533 1.00 26.88 C
ATOM 16 N7 A A2041 50.832 131.569 102.225 1.00 28.11 N
ATOM 17 C5 A A2041 49.806 132.131 101.482 1.00 26.58 C
ATOM 18 C6 A A2041 49.659 133.387 100.871 1.00 26.91 C
ATOM 19 N6 A A2041 50.580 134.350 100.924 1.00 27.37 N
ATOM 20 N1 A A2041 48.514 133.631 100.199 1.00 27.41 N
ATOM 21 C2 A A2041 47.580 132.677 100.163 1.00 26.88 C
ATOM 22 N3 A A2041 47.596 131.461 100.707 1.00 29.09 N
ATOM 23 C4 A A2041 48.752 131.245 101.359 1.00 28.12 C
ATOM 24 P A A2042 49.685 125.270 99.473 1.00 32.72 P
ATOM 25 OP1 A A2042 49.680 126.497 98.615 1.00 32.05 O
ATOM 26 OP2 A A2042 49.066 124.021 98.972 1.00 32.68 O
ATOM 27 O5' A A2042 51.175 124.908 99.892 1.00 29.93 O
TER
ATOM 1 O3' U B2489 53.262 145.058 97.613 1.00 36.06 O
ATOM 2 P A B2490 52.442 144.236 98.719 1.00 36.13 P
ATOM 3 OP1 A B2490 51.396 145.148 99.281 1.00 37.04 O
ATOM 4 OP2 A B2490 53.436 143.612 99.620 1.00 37.00 O
ATOM 5 O5' A B2490 51.671 143.147 97.851 1.00 36.58 O
ATOM 6 C5' A B2490 51.723 141.768 98.178 1.00 34.07 C
ATOM 7 C4' A B2490 50.338 141.253 98.469 1.00 34.86 C
ATOM 8 O4' A B2490 50.504 139.989 99.156 1.00 36.37 O
ATOM 9 C3' A B2490 49.541 142.096 99.456 1.00 35.33 C
ATOM 10 O3' A B2490 48.178 141.694 99.430 1.00 35.98 O
ATOM 11 C2' A B2490 50.169 141.685 100.786 1.00 36.45 C
ATOM 12 O2' A B2490 49.313 141.857 101.897 1.00 40.15 O
ATOM 13 C1' A B2490 50.457 140.198 100.554 1.00 35.28 C
ATOM 14 N9 A B2490 51.754 139.804 101.100 1.00 33.82 N
ATOM 15 C8 A B2490 52.958 140.442 100.942 1.00 31.00 C
ATOM 16 N7 A B2490 53.940 139.879 101.597 1.00 33.16 N
ATOM 17 C5 A B2490 53.347 138.794 102.223 1.00 31.53 C
ATOM 18 C6 A B2490 53.850 137.819 103.084 1.00 31.81 C
ATOM 19 N6 A B2490 55.111 137.808 103.522 1.00 31.40 N
ATOM 20 N1 A B2490 53.002 136.852 103.510 1.00 31.16 N
ATOM 21 C2 A B2490 51.731 136.900 103.112 1.00 29.63 C
ATOM 22 N3 A B2490 51.131 137.786 102.326 1.00 31.10 N
ATOM 23 C4 A B2490 52.007 138.719 101.907 1.00 32.86 C
ATOM 24 P U B2491 47.110 142.466 98.505 1.00 37.81 P
ATOM 25 OP1 U B2491 47.789 143.122 97.359 1.00 35.65 O
ATOM 26 OP2 U B2491 46.230 143.262 99.402 1.00 37.12 O
ATOM 27 O5' U B2491 46.239 141.262 97.922 1.00 37.31 O
TER
Atoms:
OP1: (53.275,125.616,104.117)
OP2: (53.636,128.163,103.948)
C3': (49.267,126.913,101.469)
C1': (48.313,128.917,102.271)
C5': (50.303,126.310,103.741)
O4': (48.842,128.190,103.376)
C8: (50.383,130.373,102.533)
O2': (46.912,127.396,101.088)
C6: (49.659,133.387,100.871)
C5: (49.806,132.131,101.482)
C4: (48.752,131.245,101.359)
P: (52.778,127.007,104.332)
C4': (49.102,126.819,102.978)
C2': (48.219,127.952,101.090)
C2: (47.580,132.677,100.163)
N1: (48.514,133.631,100.199)
N3: (47.596,131.461,100.707)
N6: (50.580,134.350,100.924)
N7: (50.832,131.569,102.225)
N9: (49.124,130.117,102.057)
O5': (51.406,127.208,103.557)
O3': (48.982,125.659,100.861)
OP2: (53.636,128.163,103.948)
C3': (49.267,126.913,101.469)
C1': (48.313,128.917,102.271)
C5': (50.303,126.310,103.741)
O4': (48.842,128.190,103.376)
C8: (50.383,130.373,102.533)
O2': (46.912,127.396,101.088)
C6: (49.659,133.387,100.871)
C5: (49.806,132.131,101.482)
C4: (48.752,131.245,101.359)
P: (52.778,127.007,104.332)
C4': (49.102,126.819,102.978)
C2': (48.219,127.952,101.090)
C2: (47.580,132.677,100.163)
N1: (48.514,133.631,100.199)
N3: (47.596,131.461,100.707)
N6: (50.580,134.350,100.924)
N7: (50.832,131.569,102.225)
N9: (49.124,130.117,102.057)
O5': (51.406,127.208,103.557)
O3': (48.982,125.659,100.861)
OP1: (51.396,145.148,99.281)
OP2: (53.436,143.612,99.620)
C3': (49.541,142.096,99.456)
C1': (50.457,140.198,100.554)
C5': (51.723,141.768,98.178)
O4': (50.504,139.989,99.156)
C8: (52.958,140.442,100.942)
O2': (49.313,141.857,101.897)
C6: (53.850,137.819,103.084)
C5: (53.347,138.794,102.223)
C4: (52.007,138.719,101.907)
P: (52.442,144.236,98.719)
C4': (50.338,141.253,98.469)
C2': (50.169,141.685,100.786)
C2: (51.731,136.900,103.112)
N1: (53.002,136.852,103.510)
N3: (51.131,137.786,102.326)
N6: (55.111,137.808,103.522)
N7: (53.940,139.879,101.597)
N9: (51.754,139.804,101.100)
O5': (51.671,143.147,97.851)
O3': (48.178,141.694,99.430)
OP2: (53.436,143.612,99.620)
C3': (49.541,142.096,99.456)
C1': (50.457,140.198,100.554)
C5': (51.723,141.768,98.178)
O4': (50.504,139.989,99.156)
C8: (52.958,140.442,100.942)
O2': (49.313,141.857,101.897)
C6: (53.850,137.819,103.084)
C5: (53.347,138.794,102.223)
C4: (52.007,138.719,101.907)
P: (52.442,144.236,98.719)
C4': (50.338,141.253,98.469)
C2': (50.169,141.685,100.786)
C2: (51.731,136.900,103.112)
N1: (53.002,136.852,103.510)
N3: (51.131,137.786,102.326)
N6: (55.111,137.808,103.522)
N7: (53.940,139.879,101.597)
N9: (51.754,139.804,101.100)
O5': (51.671,143.147,97.851)
O3': (48.178,141.694,99.430)
Image (generated by PyMOL):