Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQK:02041:02490
Extra
PDB:
ATOM 1 O3' G A2040 52.302 127.049 106.162 1.00 31.51 O
ATOM 2 P A A2041 52.721 126.957 104.612 1.00 31.49 P
ATOM 3 OP1 A A2041 53.169 125.571 104.380 1.00 30.87 O
ATOM 4 OP2 A A2041 53.611 128.080 104.243 1.00 31.07 O
ATOM 5 O5' A A2041 51.352 127.188 103.837 1.00 33.40 O
ATOM 6 C5' A A2041 50.215 126.342 104.065 1.00 30.99 C
ATOM 7 C4' A A2041 49.039 126.852 103.275 1.00 32.14 C
ATOM 8 O4' A A2041 48.758 128.218 103.676 1.00 31.20 O
ATOM 9 C3' A A2041 49.236 126.945 101.769 1.00 31.74 C
ATOM 10 O3' A A2041 48.957 125.686 101.164 1.00 33.68 O
ATOM 11 C2' A A2041 48.200 127.988 101.370 1.00 30.59 C
ATOM 12 O2' A A2041 46.896 127.445 101.303 1.00 34.03 O
ATOM 13 C1' A A2041 48.249 128.944 102.564 1.00 31.13 C
ATOM 14 N9 A A2041 49.061 130.147 102.368 1.00 28.66 N
ATOM 15 C8 A A2041 50.342 130.384 102.794 1.00 28.93 C
ATOM 16 N7 A A2041 50.794 131.571 102.478 1.00 30.13 N
ATOM 17 C5 A A2041 49.743 132.157 101.793 1.00 28.89 C
ATOM 18 C6 A A2041 49.591 133.412 101.191 1.00 28.99 C
ATOM 19 N6 A A2041 50.538 134.352 101.182 1.00 29.13 N
ATOM 20 N1 A A2041 48.414 133.677 100.585 1.00 31.41 N
ATOM 21 C2 A A2041 47.463 132.740 100.592 1.00 28.49 C
ATOM 22 N3 A A2041 47.484 131.528 101.124 1.00 30.39 N
ATOM 23 C4 A A2041 48.667 131.291 101.717 1.00 30.04 C
ATOM 24 P A A2042 49.596 125.312 99.737 1.00 35.26 P
ATOM 25 OP1 A A2042 49.612 126.518 98.852 1.00 33.07 O
ATOM 26 OP2 A A2042 48.902 124.082 99.290 1.00 36.12 O
ATOM 27 O5' A A2042 51.104 124.929 100.074 1.00 32.66 O
TER
ATOM 1 O3' U B2489 53.285 145.097 97.874 1.00 36.48 O
ATOM 2 P A B2490 52.466 144.240 98.958 1.00 36.21 P
ATOM 3 OP1 A B2490 51.395 145.083 99.539 1.00 39.80 O
ATOM 4 OP2 A B2490 53.448 143.611 99.847 1.00 39.51 O
ATOM 5 O5' A B2490 51.733 143.171 98.036 1.00 39.87 O
ATOM 6 C5' A B2490 51.811 141.782 98.297 1.00 37.78 C
ATOM 7 C4' A B2490 50.440 141.237 98.610 1.00 36.75 C
ATOM 8 O4' A B2490 50.659 139.980 99.291 1.00 37.88 O
ATOM 9 C3' A B2490 49.633 142.057 99.614 1.00 36.54 C
ATOM 10 O3' A B2490 48.284 141.613 99.628 1.00 38.69 O
ATOM 11 C2' A B2490 50.283 141.657 100.931 1.00 36.69 C
ATOM 12 O2' A B2490 49.444 141.815 102.054 1.00 38.99 O
ATOM 13 C1' A B2490 50.582 140.177 100.692 1.00 36.80 C
ATOM 14 N9 A B2490 51.863 139.792 101.274 1.00 35.00 N
ATOM 15 C8 A B2490 53.078 140.409 101.119 1.00 33.15 C
ATOM 16 N7 A B2490 54.036 139.864 101.822 1.00 35.10 N
ATOM 17 C5 A B2490 53.415 138.811 102.474 1.00 34.01 C
ATOM 18 C6 A B2490 53.884 137.856 103.384 1.00 33.97 C
ATOM 19 N6 A B2490 55.140 137.809 103.824 1.00 32.66 N
ATOM 20 N1 A B2490 53.002 136.937 103.840 1.00 33.24 N
ATOM 21 C2 A B2490 51.744 136.993 103.408 1.00 30.48 C
ATOM 22 N3 A B2490 51.184 137.844 102.562 1.00 32.48 N
ATOM 23 C4 A B2490 52.082 138.741 102.127 1.00 33.49 C
ATOM 24 P U B2491 47.149 142.395 98.797 1.00 41.49 P
ATOM 25 OP1 U B2491 47.720 142.940 97.539 1.00 38.98 O
ATOM 26 OP2 U B2491 46.432 143.285 99.733 1.00 38.55 O
ATOM 27 O5' U B2491 46.161 141.206 98.414 1.00 40.11 O
TER
ATOM 2 P A A2041 52.721 126.957 104.612 1.00 31.49 P
ATOM 3 OP1 A A2041 53.169 125.571 104.380 1.00 30.87 O
ATOM 4 OP2 A A2041 53.611 128.080 104.243 1.00 31.07 O
ATOM 5 O5' A A2041 51.352 127.188 103.837 1.00 33.40 O
ATOM 6 C5' A A2041 50.215 126.342 104.065 1.00 30.99 C
ATOM 7 C4' A A2041 49.039 126.852 103.275 1.00 32.14 C
ATOM 8 O4' A A2041 48.758 128.218 103.676 1.00 31.20 O
ATOM 9 C3' A A2041 49.236 126.945 101.769 1.00 31.74 C
ATOM 10 O3' A A2041 48.957 125.686 101.164 1.00 33.68 O
ATOM 11 C2' A A2041 48.200 127.988 101.370 1.00 30.59 C
ATOM 12 O2' A A2041 46.896 127.445 101.303 1.00 34.03 O
ATOM 13 C1' A A2041 48.249 128.944 102.564 1.00 31.13 C
ATOM 14 N9 A A2041 49.061 130.147 102.368 1.00 28.66 N
ATOM 15 C8 A A2041 50.342 130.384 102.794 1.00 28.93 C
ATOM 16 N7 A A2041 50.794 131.571 102.478 1.00 30.13 N
ATOM 17 C5 A A2041 49.743 132.157 101.793 1.00 28.89 C
ATOM 18 C6 A A2041 49.591 133.412 101.191 1.00 28.99 C
ATOM 19 N6 A A2041 50.538 134.352 101.182 1.00 29.13 N
ATOM 20 N1 A A2041 48.414 133.677 100.585 1.00 31.41 N
ATOM 21 C2 A A2041 47.463 132.740 100.592 1.00 28.49 C
ATOM 22 N3 A A2041 47.484 131.528 101.124 1.00 30.39 N
ATOM 23 C4 A A2041 48.667 131.291 101.717 1.00 30.04 C
ATOM 24 P A A2042 49.596 125.312 99.737 1.00 35.26 P
ATOM 25 OP1 A A2042 49.612 126.518 98.852 1.00 33.07 O
ATOM 26 OP2 A A2042 48.902 124.082 99.290 1.00 36.12 O
ATOM 27 O5' A A2042 51.104 124.929 100.074 1.00 32.66 O
TER
ATOM 1 O3' U B2489 53.285 145.097 97.874 1.00 36.48 O
ATOM 2 P A B2490 52.466 144.240 98.958 1.00 36.21 P
ATOM 3 OP1 A B2490 51.395 145.083 99.539 1.00 39.80 O
ATOM 4 OP2 A B2490 53.448 143.611 99.847 1.00 39.51 O
ATOM 5 O5' A B2490 51.733 143.171 98.036 1.00 39.87 O
ATOM 6 C5' A B2490 51.811 141.782 98.297 1.00 37.78 C
ATOM 7 C4' A B2490 50.440 141.237 98.610 1.00 36.75 C
ATOM 8 O4' A B2490 50.659 139.980 99.291 1.00 37.88 O
ATOM 9 C3' A B2490 49.633 142.057 99.614 1.00 36.54 C
ATOM 10 O3' A B2490 48.284 141.613 99.628 1.00 38.69 O
ATOM 11 C2' A B2490 50.283 141.657 100.931 1.00 36.69 C
ATOM 12 O2' A B2490 49.444 141.815 102.054 1.00 38.99 O
ATOM 13 C1' A B2490 50.582 140.177 100.692 1.00 36.80 C
ATOM 14 N9 A B2490 51.863 139.792 101.274 1.00 35.00 N
ATOM 15 C8 A B2490 53.078 140.409 101.119 1.00 33.15 C
ATOM 16 N7 A B2490 54.036 139.864 101.822 1.00 35.10 N
ATOM 17 C5 A B2490 53.415 138.811 102.474 1.00 34.01 C
ATOM 18 C6 A B2490 53.884 137.856 103.384 1.00 33.97 C
ATOM 19 N6 A B2490 55.140 137.809 103.824 1.00 32.66 N
ATOM 20 N1 A B2490 53.002 136.937 103.840 1.00 33.24 N
ATOM 21 C2 A B2490 51.744 136.993 103.408 1.00 30.48 C
ATOM 22 N3 A B2490 51.184 137.844 102.562 1.00 32.48 N
ATOM 23 C4 A B2490 52.082 138.741 102.127 1.00 33.49 C
ATOM 24 P U B2491 47.149 142.395 98.797 1.00 41.49 P
ATOM 25 OP1 U B2491 47.720 142.940 97.539 1.00 38.98 O
ATOM 26 OP2 U B2491 46.432 143.285 99.733 1.00 38.55 O
ATOM 27 O5' U B2491 46.161 141.206 98.414 1.00 40.11 O
TER
Atoms:
OP1: (53.169,125.571,104.380)
OP2: (53.611,128.080,104.243)
C3': (49.236,126.945,101.769)
C1': (48.249,128.944,102.564)
C5': (50.215,126.342,104.065)
O4': (48.758,128.218,103.676)
C8: (50.342,130.384,102.794)
O2': (46.896,127.445,101.303)
C6: (49.591,133.412,101.191)
C5: (49.743,132.157,101.793)
C4: (48.667,131.291,101.717)
P: (52.721,126.957,104.612)
C4': (49.039,126.852,103.275)
C2': (48.200,127.988,101.370)
C2: (47.463,132.740,100.592)
N1: (48.414,133.677,100.585)
N3: (47.484,131.528,101.124)
N6: (50.538,134.352,101.182)
N7: (50.794,131.571,102.478)
N9: (49.061,130.147,102.368)
O5': (51.352,127.188,103.837)
O3': (48.957,125.686,101.164)
OP2: (53.611,128.080,104.243)
C3': (49.236,126.945,101.769)
C1': (48.249,128.944,102.564)
C5': (50.215,126.342,104.065)
O4': (48.758,128.218,103.676)
C8: (50.342,130.384,102.794)
O2': (46.896,127.445,101.303)
C6: (49.591,133.412,101.191)
C5: (49.743,132.157,101.793)
C4: (48.667,131.291,101.717)
P: (52.721,126.957,104.612)
C4': (49.039,126.852,103.275)
C2': (48.200,127.988,101.370)
C2: (47.463,132.740,100.592)
N1: (48.414,133.677,100.585)
N3: (47.484,131.528,101.124)
N6: (50.538,134.352,101.182)
N7: (50.794,131.571,102.478)
N9: (49.061,130.147,102.368)
O5': (51.352,127.188,103.837)
O3': (48.957,125.686,101.164)
OP1: (51.395,145.083,99.539)
OP2: (53.448,143.611,99.847)
C3': (49.633,142.057,99.614)
C1': (50.582,140.177,100.692)
C5': (51.811,141.782,98.297)
O4': (50.659,139.980,99.291)
C8: (53.078,140.409,101.119)
O2': (49.444,141.815,102.054)
C6: (53.884,137.856,103.384)
C5: (53.415,138.811,102.474)
C4: (52.082,138.741,102.127)
P: (52.466,144.240,98.958)
C4': (50.440,141.237,98.610)
C2': (50.283,141.657,100.931)
C2: (51.744,136.993,103.408)
N1: (53.002,136.937,103.840)
N3: (51.184,137.844,102.562)
N6: (55.140,137.809,103.824)
N7: (54.036,139.864,101.822)
N9: (51.863,139.792,101.274)
O5': (51.733,143.171,98.036)
O3': (48.284,141.613,99.628)
OP2: (53.448,143.611,99.847)
C3': (49.633,142.057,99.614)
C1': (50.582,140.177,100.692)
C5': (51.811,141.782,98.297)
O4': (50.659,139.980,99.291)
C8: (53.078,140.409,101.119)
O2': (49.444,141.815,102.054)
C6: (53.884,137.856,103.384)
C5: (53.415,138.811,102.474)
C4: (52.082,138.741,102.127)
P: (52.466,144.240,98.958)
C4': (50.440,141.237,98.610)
C2': (50.283,141.657,100.931)
C2: (51.744,136.993,103.408)
N1: (53.002,136.937,103.840)
N3: (51.184,137.844,102.562)
N6: (55.140,137.809,103.824)
N7: (54.036,139.864,101.822)
N9: (51.863,139.792,101.274)
O5': (51.733,143.171,98.036)
O3': (48.284,141.613,99.628)
Image (generated by PyMOL):