ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQL:01937:01943

Extra

PDB:
ATOM 1 O3' C A1936 105.407 134.038 127.134 1.00 50.40 O
ATOM 2 P A A1937 104.443 134.783 128.177 1.00 51.22 P
ATOM 3 OP1 A A1937 105.098 136.072 128.536 1.00 54.09 O
ATOM 4 OP2 A A1937 104.051 133.829 129.247 1.00 50.07 O
ATOM 5 O5' A A1937 103.151 135.148 127.331 1.00 51.86 O
ATOM 6 C5' A A1937 103.161 136.241 126.394 1.00 50.47 C
ATOM 7 C4' A A1937 101.816 136.349 125.726 1.00 49.82 C
ATOM 8 O4' A A1937 101.591 135.161 124.921 1.00 49.26 O
ATOM 9 C3' A A1937 100.638 136.374 126.688 1.00 49.20 C
ATOM 10 O3' A A1937 100.407 137.687 127.187 1.00 49.30 O
ATOM 11 C2' A A1937 99.504 135.860 125.814 1.00 49.10 C
ATOM 12 O2' A A1937 99.017 136.854 124.932 1.00 47.74 O
ATOM 13 C1' A A1937 100.226 134.781 125.001 1.00 48.62 C
ATOM 14 N9 A A1937 100.166 133.454 125.612 1.00 48.81 N
ATOM 15 C8 A A1937 101.032 132.910 126.531 1.00 46.96 C
ATOM 16 N7 A A1937 100.730 131.687 126.884 1.00 46.89 N
ATOM 17 C5 A A1937 99.587 131.401 126.153 1.00 47.56 C
ATOM 18 C6 A A1937 98.776 130.255 126.073 1.00 47.71 C
ATOM 19 N6 A A1937 99.002 129.140 126.766 1.00 44.23 N
ATOM 20 N1 A A1937 97.710 130.296 125.244 1.00 48.18 N
ATOM 21 C2 A A1937 97.482 131.418 124.549 1.00 48.09 C
ATOM 22 N3 A A1937 98.171 132.559 124.539 1.00 48.07 N
ATOM 23 C4 A A1937 99.225 132.483 125.369 1.00 48.00 C
ATOM 24 P U A1938 99.737 137.885 128.633 1.00 48.17 P
ATOM 25 OP1 U A1938 99.664 139.342 128.889 1.00 46.46 O
ATOM 26 OP2 U A1938 100.421 136.998 129.604 1.00 48.59 O
ATOM 27 O5' U A1938 98.258 137.326 128.452 1.00 49.01 O
TER

ATOM 1 O3' U B1942 92.975 123.893 117.591 1.00 38.54 O
ATOM 2 P A B1943 94.406 124.454 117.125 1.00 39.40 P
ATOM 3 OP1 A B1943 94.783 123.705 115.908 1.00 42.35 O
ATOM 4 OP2 A B1943 95.323 124.464 118.286 1.00 42.84 O
ATOM 5 O5' A B1943 94.123 125.968 116.716 1.00 40.19 O
ATOM 6 C5' A B1943 93.134 126.292 115.726 1.00 40.52 C
ATOM 7 C4' A B1943 93.106 127.780 115.485 1.00 41.57 C
ATOM 8 O4' A B1943 92.751 128.476 116.710 1.00 41.42 O
ATOM 9 C3' A B1943 94.434 128.399 115.098 1.00 42.22 C
ATOM 10 O3' A B1943 94.705 128.232 113.721 1.00 42.89 O
ATOM 11 C2' A B1943 94.228 129.861 115.458 1.00 42.97 C
ATOM 12 O2' A B1943 93.483 130.572 114.493 1.00 44.30 O
ATOM 13 C1' A B1943 93.403 129.739 116.740 1.00 41.51 C
ATOM 14 N9 A B1943 94.213 129.837 117.956 1.00 42.22 N
ATOM 15 C8 A B1943 94.386 128.901 118.948 1.00 42.15 C
ATOM 16 N7 A B1943 95.156 129.303 119.923 1.00 39.89 N
ATOM 17 C5 A B1943 95.521 130.590 119.551 1.00 41.62 C
ATOM 18 C6 A B1943 96.336 131.552 120.163 1.00 42.28 C
ATOM 19 N6 A B1943 96.936 131.367 121.340 1.00 45.77 N
ATOM 20 N1 A B1943 96.515 132.725 119.523 1.00 41.78 N
ATOM 21 C2 A B1943 95.903 132.912 118.350 1.00 42.14 C
ATOM 22 N3 A B1943 95.107 132.088 117.677 1.00 41.62 N
ATOM 23 C4 A B1943 94.956 130.929 118.340 1.00 40.97 C
ATOM 24 P G B1944 96.191 127.857 113.251 1.00 42.01 P
ATOM 25 OP1 G B1944 96.215 127.827 111.766 1.00 44.31 O
ATOM 26 OP2 G B1944 96.612 126.654 114.021 1.00 42.44 O
ATOM 27 O5' G B1944 97.058 129.099 113.730 1.00 42.15 O
TER

Atoms:
OP1: (105.098,136.072,128.536)
OP2: (104.051,133.829,129.247)
C3': (100.638,136.374,126.688)
C1': (100.226,134.781,125.001)
C5': (103.161,136.241,126.394)
O4': (101.591,135.161,124.921)
C8: (101.032,132.910,126.531)
O2': (99.017,136.854,124.932)
C6: (98.776,130.255,126.073)
C5: (99.587,131.401,126.153)
C4: (99.225,132.483,125.369)
P: (104.443,134.783,128.177)
C4': (101.816,136.349,125.726)
C2': (99.504,135.860,125.814)
C2: (97.482,131.418,124.549)
N1: (97.710,130.296,125.244)
N3: (98.171,132.559,124.539)
N6: (99.002,129.140,126.766)
N7: (100.730,131.687,126.884)
N9: (100.166,133.454,125.612)
O5': (103.151,135.148,127.331)
O3': (100.407,137.687,127.187)
OP1: (94.783,123.705,115.908)
OP2: (95.323,124.464,118.286)
C3': (94.434,128.399,115.098)
C1': (93.403,129.739,116.740)
C5': (93.134,126.292,115.726)
O4': (92.751,128.476,116.710)
C8: (94.386,128.901,118.948)
O2': (93.483,130.572,114.493)
C6: (96.336,131.552,120.163)
C5: (95.521,130.590,119.551)
C4: (94.956,130.929,118.340)
P: (94.406,124.454,117.125)
C4': (93.106,127.780,115.485)
C2': (94.228,129.861,115.458)
C2: (95.903,132.912,118.350)
N1: (96.515,132.725,119.523)
N3: (95.107,132.088,117.677)
N6: (96.936,131.367,121.340)
N7: (95.156,129.303,119.923)
N9: (94.213,129.837,117.956)
O5': (94.123,125.968,116.716)
O3': (94.705,128.232,113.721)
Image (generated by PyMOL):
PyMOL image
show in jmol