Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQM:02041:02490
Extra
PDB:
ATOM 1 O3' G A2040 52.129 126.873 106.059 1.00 33.72 O
ATOM 2 P A A2041 52.607 126.787 104.527 1.00 35.20 P
ATOM 3 OP1 A A2041 53.153 125.423 104.306 1.00 34.44 O
ATOM 4 OP2 A A2041 53.440 127.959 104.181 1.00 34.13 O
ATOM 5 O5' A A2041 51.261 126.974 103.699 1.00 36.53 O
ATOM 6 C5' A A2041 50.113 126.138 103.916 1.00 36.13 C
ATOM 7 C4' A A2041 48.947 126.661 103.113 1.00 36.48 C
ATOM 8 O4' A A2041 48.683 128.032 103.507 1.00 36.48 O
ATOM 9 C3' A A2041 49.154 126.756 101.607 1.00 35.96 C
ATOM 10 O3' A A2041 48.873 125.508 100.985 1.00 36.30 O
ATOM 11 C2' A A2041 48.123 127.807 101.199 1.00 36.05 C
ATOM 12 O2' A A2041 46.809 127.277 101.092 1.00 38.42 O
ATOM 13 C1' A A2041 48.167 128.756 102.397 1.00 35.61 C
ATOM 14 N9 A A2041 48.965 129.968 102.209 1.00 36.11 N
ATOM 15 C8 A A2041 50.242 130.218 102.645 1.00 34.36 C
ATOM 16 N7 A A2041 50.674 131.419 102.351 1.00 35.12 N
ATOM 17 C5 A A2041 49.616 131.998 101.667 1.00 36.26 C
ATOM 18 C6 A A2041 49.441 133.268 101.090 1.00 35.71 C
ATOM 19 N6 A A2041 50.364 134.230 101.115 1.00 34.38 N
ATOM 20 N1 A A2041 48.263 133.522 100.480 1.00 38.04 N
ATOM 21 C2 A A2041 47.332 132.568 100.463 1.00 36.27 C
ATOM 22 N3 A A2041 47.374 131.342 100.971 1.00 37.59 N
ATOM 23 C4 A A2041 48.558 131.114 101.566 1.00 36.12 C
ATOM 24 P A A2042 49.537 125.147 99.569 1.00 37.85 P
ATOM 25 OP1 A A2042 49.584 126.382 98.735 1.00 38.87 O
ATOM 26 OP2 A A2042 48.834 123.952 99.061 1.00 38.83 O
ATOM 27 O5' A A2042 51.022 124.713 99.944 1.00 36.84 O
TER
ATOM 1 O3' U B2489 53.146 144.919 97.679 1.00 43.93 O
ATOM 2 P A B2490 52.336 144.093 98.791 1.00 44.57 P
ATOM 3 OP1 A B2490 51.319 144.993 99.383 1.00 45.73 O
ATOM 4 OP2 A B2490 53.319 143.436 99.663 1.00 46.88 O
ATOM 5 O5' A B2490 51.548 143.024 97.914 1.00 47.01 O
ATOM 6 C5' A B2490 51.612 141.635 98.199 1.00 42.88 C
ATOM 7 C4' A B2490 50.236 141.111 98.538 1.00 42.36 C
ATOM 8 O4' A B2490 50.434 139.845 99.211 1.00 42.21 O
ATOM 9 C3' A B2490 49.469 141.951 99.558 1.00 42.84 C
ATOM 10 O3' A B2490 48.102 141.567 99.595 1.00 44.46 O
ATOM 11 C2' A B2490 50.127 141.527 100.864 1.00 41.67 C
ATOM 12 O2' A B2490 49.299 141.701 101.991 1.00 45.05 O
ATOM 13 C1' A B2490 50.394 140.041 100.613 1.00 41.50 C
ATOM 14 N9 A B2490 51.688 139.646 101.157 1.00 40.24 N
ATOM 15 C8 A B2490 52.895 140.276 100.986 1.00 40.12 C
ATOM 16 N7 A B2490 53.874 139.725 101.653 1.00 43.65 N
ATOM 17 C5 A B2490 53.275 138.650 102.295 1.00 40.84 C
ATOM 18 C6 A B2490 53.771 137.681 103.170 1.00 40.48 C
ATOM 19 N6 A B2490 55.033 137.638 103.581 1.00 42.05 N
ATOM 20 N1 A B2490 52.912 136.746 103.623 1.00 40.65 N
ATOM 21 C2 A B2490 51.641 136.801 103.226 1.00 36.88 C
ATOM 22 N3 A B2490 51.055 137.666 102.418 1.00 37.96 N
ATOM 23 C4 A B2490 51.935 138.578 101.981 1.00 38.75 C
ATOM 24 P U B2491 47.014 142.318 98.686 1.00 47.85 P
ATOM 25 OP1 U B2491 47.669 142.913 97.480 1.00 46.03 O
ATOM 26 OP2 U B2491 46.194 143.169 99.578 1.00 46.37 O
ATOM 27 O5' U B2491 46.104 141.100 98.214 1.00 46.05 O
TER
ATOM 2 P A A2041 52.607 126.787 104.527 1.00 35.20 P
ATOM 3 OP1 A A2041 53.153 125.423 104.306 1.00 34.44 O
ATOM 4 OP2 A A2041 53.440 127.959 104.181 1.00 34.13 O
ATOM 5 O5' A A2041 51.261 126.974 103.699 1.00 36.53 O
ATOM 6 C5' A A2041 50.113 126.138 103.916 1.00 36.13 C
ATOM 7 C4' A A2041 48.947 126.661 103.113 1.00 36.48 C
ATOM 8 O4' A A2041 48.683 128.032 103.507 1.00 36.48 O
ATOM 9 C3' A A2041 49.154 126.756 101.607 1.00 35.96 C
ATOM 10 O3' A A2041 48.873 125.508 100.985 1.00 36.30 O
ATOM 11 C2' A A2041 48.123 127.807 101.199 1.00 36.05 C
ATOM 12 O2' A A2041 46.809 127.277 101.092 1.00 38.42 O
ATOM 13 C1' A A2041 48.167 128.756 102.397 1.00 35.61 C
ATOM 14 N9 A A2041 48.965 129.968 102.209 1.00 36.11 N
ATOM 15 C8 A A2041 50.242 130.218 102.645 1.00 34.36 C
ATOM 16 N7 A A2041 50.674 131.419 102.351 1.00 35.12 N
ATOM 17 C5 A A2041 49.616 131.998 101.667 1.00 36.26 C
ATOM 18 C6 A A2041 49.441 133.268 101.090 1.00 35.71 C
ATOM 19 N6 A A2041 50.364 134.230 101.115 1.00 34.38 N
ATOM 20 N1 A A2041 48.263 133.522 100.480 1.00 38.04 N
ATOM 21 C2 A A2041 47.332 132.568 100.463 1.00 36.27 C
ATOM 22 N3 A A2041 47.374 131.342 100.971 1.00 37.59 N
ATOM 23 C4 A A2041 48.558 131.114 101.566 1.00 36.12 C
ATOM 24 P A A2042 49.537 125.147 99.569 1.00 37.85 P
ATOM 25 OP1 A A2042 49.584 126.382 98.735 1.00 38.87 O
ATOM 26 OP2 A A2042 48.834 123.952 99.061 1.00 38.83 O
ATOM 27 O5' A A2042 51.022 124.713 99.944 1.00 36.84 O
TER
ATOM 1 O3' U B2489 53.146 144.919 97.679 1.00 43.93 O
ATOM 2 P A B2490 52.336 144.093 98.791 1.00 44.57 P
ATOM 3 OP1 A B2490 51.319 144.993 99.383 1.00 45.73 O
ATOM 4 OP2 A B2490 53.319 143.436 99.663 1.00 46.88 O
ATOM 5 O5' A B2490 51.548 143.024 97.914 1.00 47.01 O
ATOM 6 C5' A B2490 51.612 141.635 98.199 1.00 42.88 C
ATOM 7 C4' A B2490 50.236 141.111 98.538 1.00 42.36 C
ATOM 8 O4' A B2490 50.434 139.845 99.211 1.00 42.21 O
ATOM 9 C3' A B2490 49.469 141.951 99.558 1.00 42.84 C
ATOM 10 O3' A B2490 48.102 141.567 99.595 1.00 44.46 O
ATOM 11 C2' A B2490 50.127 141.527 100.864 1.00 41.67 C
ATOM 12 O2' A B2490 49.299 141.701 101.991 1.00 45.05 O
ATOM 13 C1' A B2490 50.394 140.041 100.613 1.00 41.50 C
ATOM 14 N9 A B2490 51.688 139.646 101.157 1.00 40.24 N
ATOM 15 C8 A B2490 52.895 140.276 100.986 1.00 40.12 C
ATOM 16 N7 A B2490 53.874 139.725 101.653 1.00 43.65 N
ATOM 17 C5 A B2490 53.275 138.650 102.295 1.00 40.84 C
ATOM 18 C6 A B2490 53.771 137.681 103.170 1.00 40.48 C
ATOM 19 N6 A B2490 55.033 137.638 103.581 1.00 42.05 N
ATOM 20 N1 A B2490 52.912 136.746 103.623 1.00 40.65 N
ATOM 21 C2 A B2490 51.641 136.801 103.226 1.00 36.88 C
ATOM 22 N3 A B2490 51.055 137.666 102.418 1.00 37.96 N
ATOM 23 C4 A B2490 51.935 138.578 101.981 1.00 38.75 C
ATOM 24 P U B2491 47.014 142.318 98.686 1.00 47.85 P
ATOM 25 OP1 U B2491 47.669 142.913 97.480 1.00 46.03 O
ATOM 26 OP2 U B2491 46.194 143.169 99.578 1.00 46.37 O
ATOM 27 O5' U B2491 46.104 141.100 98.214 1.00 46.05 O
TER
Atoms:
OP1: (53.153,125.423,104.306)
OP2: (53.440,127.959,104.181)
C3': (49.154,126.756,101.607)
C1': (48.167,128.756,102.397)
C5': (50.113,126.138,103.916)
O4': (48.683,128.032,103.507)
C8: (50.242,130.218,102.645)
O2': (46.809,127.277,101.092)
C6: (49.441,133.268,101.090)
C5: (49.616,131.998,101.667)
C4: (48.558,131.114,101.566)
P: (52.607,126.787,104.527)
C4': (48.947,126.661,103.113)
C2': (48.123,127.807,101.199)
C2: (47.332,132.568,100.463)
N1: (48.263,133.522,100.480)
N3: (47.374,131.342,100.971)
N6: (50.364,134.230,101.115)
N7: (50.674,131.419,102.351)
N9: (48.965,129.968,102.209)
O5': (51.261,126.974,103.699)
O3': (48.873,125.508,100.985)
OP2: (53.440,127.959,104.181)
C3': (49.154,126.756,101.607)
C1': (48.167,128.756,102.397)
C5': (50.113,126.138,103.916)
O4': (48.683,128.032,103.507)
C8: (50.242,130.218,102.645)
O2': (46.809,127.277,101.092)
C6: (49.441,133.268,101.090)
C5: (49.616,131.998,101.667)
C4: (48.558,131.114,101.566)
P: (52.607,126.787,104.527)
C4': (48.947,126.661,103.113)
C2': (48.123,127.807,101.199)
C2: (47.332,132.568,100.463)
N1: (48.263,133.522,100.480)
N3: (47.374,131.342,100.971)
N6: (50.364,134.230,101.115)
N7: (50.674,131.419,102.351)
N9: (48.965,129.968,102.209)
O5': (51.261,126.974,103.699)
O3': (48.873,125.508,100.985)
OP1: (51.319,144.993,99.383)
OP2: (53.319,143.436,99.663)
C3': (49.469,141.951,99.558)
C1': (50.394,140.041,100.613)
C5': (51.612,141.635,98.199)
O4': (50.434,139.845,99.211)
C8: (52.895,140.276,100.986)
O2': (49.299,141.701,101.991)
C6: (53.771,137.681,103.170)
C5: (53.275,138.650,102.295)
C4: (51.935,138.578,101.981)
P: (52.336,144.093,98.791)
C4': (50.236,141.111,98.538)
C2': (50.127,141.527,100.864)
C2: (51.641,136.801,103.226)
N1: (52.912,136.746,103.623)
N3: (51.055,137.666,102.418)
N6: (55.033,137.638,103.581)
N7: (53.874,139.725,101.653)
N9: (51.688,139.646,101.157)
O5': (51.548,143.024,97.914)
O3': (48.102,141.567,99.595)
OP2: (53.319,143.436,99.663)
C3': (49.469,141.951,99.558)
C1': (50.394,140.041,100.613)
C5': (51.612,141.635,98.199)
O4': (50.434,139.845,99.211)
C8: (52.895,140.276,100.986)
O2': (49.299,141.701,101.991)
C6: (53.771,137.681,103.170)
C5: (53.275,138.650,102.295)
C4: (51.935,138.578,101.981)
P: (52.336,144.093,98.791)
C4': (50.236,141.111,98.538)
C2': (50.127,141.527,100.864)
C2: (51.641,136.801,103.226)
N1: (52.912,136.746,103.623)
N3: (51.055,137.666,102.418)
N6: (55.033,137.638,103.581)
N7: (53.874,139.725,101.653)
N9: (51.688,139.646,101.157)
O5': (51.548,143.024,97.914)
O3': (48.102,141.567,99.595)
Image (generated by PyMOL):