ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQN:01937:01943

Extra

PDB:
ATOM 1 O3' C A1936 105.491 134.065 127.272 1.00 52.34 O
ATOM 2 P A A1937 104.508 134.795 128.306 1.00 52.61 P
ATOM 3 OP1 A A1937 105.135 136.080 128.709 1.00 56.62 O
ATOM 4 OP2 A A1937 104.090 133.815 129.342 1.00 52.32 O
ATOM 5 O5' A A1937 103.244 135.178 127.428 1.00 54.46 O
ATOM 6 C5' A A1937 103.283 136.297 126.520 1.00 52.63 C
ATOM 7 C4' A A1937 101.949 136.442 125.839 1.00 50.67 C
ATOM 8 O4' A A1937 101.722 135.268 125.016 1.00 49.99 O
ATOM 9 C3' A A1937 100.769 136.456 126.799 1.00 50.26 C
ATOM 10 O3' A A1937 100.536 137.752 127.337 1.00 50.11 O
ATOM 11 C2' A A1937 99.635 135.948 125.925 1.00 49.37 C
ATOM 12 O2' A A1937 99.132 136.948 125.058 1.00 48.36 O
ATOM 13 C1' A A1937 100.360 134.880 125.102 1.00 49.28 C
ATOM 14 N9 A A1937 100.307 133.546 125.697 1.00 48.07 N
ATOM 15 C8 A A1937 101.174 132.987 126.605 1.00 48.02 C
ATOM 16 N7 A A1937 100.861 131.762 126.952 1.00 46.85 N
ATOM 17 C5 A A1937 99.711 131.495 126.224 1.00 47.89 C
ATOM 18 C6 A A1937 98.884 130.359 126.143 1.00 47.68 C
ATOM 19 N6 A A1937 99.094 129.238 126.832 1.00 45.37 N
ATOM 20 N1 A A1937 97.817 130.418 125.315 1.00 48.03 N
ATOM 21 C2 A A1937 97.603 131.546 124.626 1.00 48.24 C
ATOM 22 N3 A A1937 98.304 132.679 124.622 1.00 47.64 N
ATOM 23 C4 A A1937 99.358 132.586 125.448 1.00 47.89 C
ATOM 24 P U A1938 99.781 137.903 128.746 1.00 49.60 P
ATOM 25 OP1 U A1938 99.680 139.349 129.047 1.00 46.11 O
ATOM 26 OP2 U A1938 100.422 136.986 129.720 1.00 48.45 O
ATOM 27 O5' U A1938 98.324 137.317 128.463 1.00 50.13 O
TER

ATOM 1 O3' U B1942 93.038 123.924 117.729 1.00 44.08 O
ATOM 2 P A B1943 94.464 124.491 117.261 1.00 42.84 P
ATOM 3 OP1 A B1943 94.849 123.699 116.076 1.00 45.31 O
ATOM 4 OP2 A B1943 95.372 124.556 118.423 1.00 43.71 O
ATOM 5 O5' A B1943 94.166 125.990 116.817 1.00 43.75 O
ATOM 6 C5' A B1943 93.124 126.296 115.884 1.00 43.76 C
ATOM 7 C4' A B1943 93.117 127.772 115.593 1.00 44.04 C
ATOM 8 O4' A B1943 92.786 128.512 116.800 1.00 43.59 O
ATOM 9 C3' A B1943 94.462 128.337 115.192 1.00 44.30 C
ATOM 10 O3' A B1943 94.746 128.106 113.828 1.00 45.50 O
ATOM 11 C2' A B1943 94.302 129.817 115.510 1.00 45.42 C
ATOM 12 O2' A B1943 93.592 130.534 114.521 1.00 45.87 O
ATOM 13 C1' A B1943 93.476 129.756 116.797 1.00 43.86 C
ATOM 14 N9 A B1943 94.293 129.853 118.009 1.00 44.34 N
ATOM 15 C8 A B1943 94.492 128.903 118.983 1.00 43.92 C
ATOM 16 N7 A B1943 95.274 129.298 119.955 1.00 41.87 N
ATOM 17 C5 A B1943 95.619 130.593 119.599 1.00 43.31 C
ATOM 18 C6 A B1943 96.438 131.553 120.215 1.00 44.31 C
ATOM 19 N6 A B1943 97.088 131.343 121.362 1.00 46.50 N
ATOM 20 N1 A B1943 96.573 132.749 119.605 1.00 42.57 N
ATOM 21 C2 A B1943 95.932 132.952 118.447 1.00 43.20 C
ATOM 22 N3 A B1943 95.141 132.126 117.766 1.00 42.88 N
ATOM 23 C4 A B1943 95.022 130.949 118.405 1.00 43.25 C
ATOM 24 P G B1944 96.260 127.848 113.369 1.00 45.47 P
ATOM 25 OP1 G B1944 96.293 127.847 111.881 1.00 46.78 O
ATOM 26 OP2 G B1944 96.764 126.670 114.120 1.00 46.44 O
ATOM 27 O5' G B1944 97.047 129.131 113.885 1.00 46.70 O
TER

Atoms:
OP1: (105.135,136.080,128.709)
OP2: (104.090,133.815,129.342)
C3': (100.769,136.456,126.799)
C1': (100.360,134.880,125.102)
C5': (103.283,136.297,126.520)
O4': (101.722,135.268,125.016)
C8: (101.174,132.987,126.605)
O2': (99.132,136.948,125.058)
C6: (98.884,130.359,126.143)
C5: (99.711,131.495,126.224)
C4: (99.358,132.586,125.448)
P: (104.508,134.795,128.306)
C4': (101.949,136.442,125.839)
C2': (99.635,135.948,125.925)
C2: (97.603,131.546,124.626)
N1: (97.817,130.418,125.315)
N3: (98.304,132.679,124.622)
N6: (99.094,129.238,126.832)
N7: (100.861,131.762,126.952)
N9: (100.307,133.546,125.697)
O5': (103.244,135.178,127.428)
O3': (100.536,137.752,127.337)
OP1: (94.849,123.699,116.076)
OP2: (95.372,124.556,118.423)
C3': (94.462,128.337,115.192)
C1': (93.476,129.756,116.797)
C5': (93.124,126.296,115.884)
O4': (92.786,128.512,116.800)
C8: (94.492,128.903,118.983)
O2': (93.592,130.534,114.521)
C6: (96.438,131.553,120.215)
C5: (95.619,130.593,119.599)
C4: (95.022,130.949,118.405)
P: (94.464,124.491,117.261)
C4': (93.117,127.772,115.593)
C2': (94.302,129.817,115.510)
C2: (95.932,132.952,118.447)
N1: (96.573,132.749,119.605)
N3: (95.141,132.126,117.766)
N6: (97.088,131.343,121.362)
N7: (95.274,129.298,119.955)
N9: (94.293,129.853,118.009)
O5': (94.166,125.990,116.817)
O3': (94.746,128.106,113.828)
Image (generated by PyMOL):
PyMOL image
show in jmol