Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQN:02041:02490
Extra
PDB:
ATOM 1 O3' G A2040 52.114 127.041 106.157 1.00 34.30 O
ATOM 2 P A A2041 52.613 126.953 104.632 1.00 33.79 P
ATOM 3 OP1 A A2041 53.137 125.580 104.442 1.00 31.71 O
ATOM 4 OP2 A A2041 53.477 128.112 104.296 1.00 31.89 O
ATOM 5 O5' A A2041 51.276 127.155 103.794 1.00 36.71 O
ATOM 6 C5' A A2041 50.125 126.326 103.997 1.00 34.92 C
ATOM 7 C4' A A2041 48.960 126.881 103.218 1.00 35.21 C
ATOM 8 O4' A A2041 48.699 128.245 103.641 1.00 33.95 O
ATOM 9 C3' A A2041 49.171 127.000 101.716 1.00 34.92 C
ATOM 10 O3' A A2041 48.876 125.757 101.094 1.00 35.74 O
ATOM 11 C2' A A2041 48.151 128.066 101.324 1.00 33.54 C
ATOM 12 O2' A A2041 46.842 127.546 101.224 1.00 36.08 O
ATOM 13 C1' A A2041 48.197 128.996 102.538 1.00 34.16 C
ATOM 14 N9 A A2041 49.012 130.200 102.362 1.00 32.74 N
ATOM 15 C8 A A2041 50.276 130.453 102.825 1.00 30.62 C
ATOM 16 N7 A A2041 50.723 131.645 102.516 1.00 32.85 N
ATOM 17 C5 A A2041 49.687 132.216 101.795 1.00 33.95 C
ATOM 18 C6 A A2041 49.533 133.475 101.186 1.00 34.63 C
ATOM 19 N6 A A2041 50.453 134.442 101.215 1.00 32.94 N
ATOM 20 N1 A A2041 48.375 133.717 100.539 1.00 36.87 N
ATOM 21 C2 A A2041 47.438 132.765 100.525 1.00 35.78 C
ATOM 22 N3 A A2041 47.460 131.554 101.065 1.00 35.45 N
ATOM 23 C4 A A2041 48.628 131.335 101.690 1.00 34.68 C
ATOM 24 P A A2042 49.539 125.385 99.682 1.00 36.01 P
ATOM 25 OP1 A A2042 49.585 126.608 98.827 1.00 36.66 O
ATOM 26 OP2 A A2042 48.830 124.175 99.197 1.00 37.56 O
ATOM 27 O5' A A2042 51.023 124.964 100.058 1.00 34.92 O
TER
ATOM 1 O3' U B2489 53.272 145.161 97.880 1.00 40.17 O
ATOM 2 P A B2490 52.422 144.294 98.933 1.00 40.24 P
ATOM 3 OP1 A B2490 51.342 145.171 99.473 1.00 42.90 O
ATOM 4 OP2 A B2490 53.367 143.646 99.856 1.00 44.24 O
ATOM 5 O5' A B2490 51.707 143.207 98.020 1.00 43.29 O
ATOM 6 C5' A B2490 51.749 141.826 98.345 1.00 40.86 C
ATOM 7 C4' A B2490 50.353 141.298 98.593 1.00 40.46 C
ATOM 8 O4' A B2490 50.530 140.014 99.234 1.00 41.00 O
ATOM 9 C3' A B2490 49.529 142.089 99.608 1.00 41.12 C
ATOM 10 O3' A B2490 48.175 141.654 99.577 1.00 43.00 O
ATOM 11 C2' A B2490 50.159 141.644 100.925 1.00 39.68 C
ATOM 12 O2' A B2490 49.315 141.771 102.049 1.00 40.81 O
ATOM 13 C1' A B2490 50.457 140.170 100.641 1.00 39.53 C
ATOM 14 N9 A B2490 51.741 139.765 101.210 1.00 37.85 N
ATOM 15 C8 A B2490 52.964 140.362 101.033 1.00 35.53 C
ATOM 16 N7 A B2490 53.924 139.812 101.731 1.00 37.77 N
ATOM 17 C5 A B2490 53.295 138.774 102.402 1.00 36.92 C
ATOM 18 C6 A B2490 53.762 137.822 103.317 1.00 35.69 C
ATOM 19 N6 A B2490 55.023 137.762 103.744 1.00 33.87 N
ATOM 20 N1 A B2490 52.875 136.921 103.789 1.00 35.38 N
ATOM 21 C2 A B2490 51.610 136.989 103.371 1.00 32.95 C
ATOM 22 N3 A B2490 51.052 137.837 102.527 1.00 34.02 N
ATOM 23 C4 A B2490 51.956 138.719 102.072 1.00 36.03 C
ATOM 24 P U B2491 47.065 142.456 98.729 1.00 44.27 P
ATOM 25 OP1 U B2491 47.660 143.009 97.484 1.00 43.16 O
ATOM 26 OP2 U B2491 46.323 143.348 99.650 1.00 43.60 O
ATOM 27 O5' U B2491 46.087 141.269 98.322 1.00 42.71 O
TER
ATOM 2 P A A2041 52.613 126.953 104.632 1.00 33.79 P
ATOM 3 OP1 A A2041 53.137 125.580 104.442 1.00 31.71 O
ATOM 4 OP2 A A2041 53.477 128.112 104.296 1.00 31.89 O
ATOM 5 O5' A A2041 51.276 127.155 103.794 1.00 36.71 O
ATOM 6 C5' A A2041 50.125 126.326 103.997 1.00 34.92 C
ATOM 7 C4' A A2041 48.960 126.881 103.218 1.00 35.21 C
ATOM 8 O4' A A2041 48.699 128.245 103.641 1.00 33.95 O
ATOM 9 C3' A A2041 49.171 127.000 101.716 1.00 34.92 C
ATOM 10 O3' A A2041 48.876 125.757 101.094 1.00 35.74 O
ATOM 11 C2' A A2041 48.151 128.066 101.324 1.00 33.54 C
ATOM 12 O2' A A2041 46.842 127.546 101.224 1.00 36.08 O
ATOM 13 C1' A A2041 48.197 128.996 102.538 1.00 34.16 C
ATOM 14 N9 A A2041 49.012 130.200 102.362 1.00 32.74 N
ATOM 15 C8 A A2041 50.276 130.453 102.825 1.00 30.62 C
ATOM 16 N7 A A2041 50.723 131.645 102.516 1.00 32.85 N
ATOM 17 C5 A A2041 49.687 132.216 101.795 1.00 33.95 C
ATOM 18 C6 A A2041 49.533 133.475 101.186 1.00 34.63 C
ATOM 19 N6 A A2041 50.453 134.442 101.215 1.00 32.94 N
ATOM 20 N1 A A2041 48.375 133.717 100.539 1.00 36.87 N
ATOM 21 C2 A A2041 47.438 132.765 100.525 1.00 35.78 C
ATOM 22 N3 A A2041 47.460 131.554 101.065 1.00 35.45 N
ATOM 23 C4 A A2041 48.628 131.335 101.690 1.00 34.68 C
ATOM 24 P A A2042 49.539 125.385 99.682 1.00 36.01 P
ATOM 25 OP1 A A2042 49.585 126.608 98.827 1.00 36.66 O
ATOM 26 OP2 A A2042 48.830 124.175 99.197 1.00 37.56 O
ATOM 27 O5' A A2042 51.023 124.964 100.058 1.00 34.92 O
TER
ATOM 1 O3' U B2489 53.272 145.161 97.880 1.00 40.17 O
ATOM 2 P A B2490 52.422 144.294 98.933 1.00 40.24 P
ATOM 3 OP1 A B2490 51.342 145.171 99.473 1.00 42.90 O
ATOM 4 OP2 A B2490 53.367 143.646 99.856 1.00 44.24 O
ATOM 5 O5' A B2490 51.707 143.207 98.020 1.00 43.29 O
ATOM 6 C5' A B2490 51.749 141.826 98.345 1.00 40.86 C
ATOM 7 C4' A B2490 50.353 141.298 98.593 1.00 40.46 C
ATOM 8 O4' A B2490 50.530 140.014 99.234 1.00 41.00 O
ATOM 9 C3' A B2490 49.529 142.089 99.608 1.00 41.12 C
ATOM 10 O3' A B2490 48.175 141.654 99.577 1.00 43.00 O
ATOM 11 C2' A B2490 50.159 141.644 100.925 1.00 39.68 C
ATOM 12 O2' A B2490 49.315 141.771 102.049 1.00 40.81 O
ATOM 13 C1' A B2490 50.457 140.170 100.641 1.00 39.53 C
ATOM 14 N9 A B2490 51.741 139.765 101.210 1.00 37.85 N
ATOM 15 C8 A B2490 52.964 140.362 101.033 1.00 35.53 C
ATOM 16 N7 A B2490 53.924 139.812 101.731 1.00 37.77 N
ATOM 17 C5 A B2490 53.295 138.774 102.402 1.00 36.92 C
ATOM 18 C6 A B2490 53.762 137.822 103.317 1.00 35.69 C
ATOM 19 N6 A B2490 55.023 137.762 103.744 1.00 33.87 N
ATOM 20 N1 A B2490 52.875 136.921 103.789 1.00 35.38 N
ATOM 21 C2 A B2490 51.610 136.989 103.371 1.00 32.95 C
ATOM 22 N3 A B2490 51.052 137.837 102.527 1.00 34.02 N
ATOM 23 C4 A B2490 51.956 138.719 102.072 1.00 36.03 C
ATOM 24 P U B2491 47.065 142.456 98.729 1.00 44.27 P
ATOM 25 OP1 U B2491 47.660 143.009 97.484 1.00 43.16 O
ATOM 26 OP2 U B2491 46.323 143.348 99.650 1.00 43.60 O
ATOM 27 O5' U B2491 46.087 141.269 98.322 1.00 42.71 O
TER
Atoms:
OP1: (53.137,125.580,104.442)
OP2: (53.477,128.112,104.296)
C3': (49.171,127.000,101.716)
C1': (48.197,128.996,102.538)
C5': (50.125,126.326,103.997)
O4': (48.699,128.245,103.641)
C8: (50.276,130.453,102.825)
O2': (46.842,127.546,101.224)
C6: (49.533,133.475,101.186)
C5: (49.687,132.216,101.795)
C4: (48.628,131.335,101.690)
P: (52.613,126.953,104.632)
C4': (48.960,126.881,103.218)
C2': (48.151,128.066,101.324)
C2: (47.438,132.765,100.525)
N1: (48.375,133.717,100.539)
N3: (47.460,131.554,101.065)
N6: (50.453,134.442,101.215)
N7: (50.723,131.645,102.516)
N9: (49.012,130.200,102.362)
O5': (51.276,127.155,103.794)
O3': (48.876,125.757,101.094)
OP2: (53.477,128.112,104.296)
C3': (49.171,127.000,101.716)
C1': (48.197,128.996,102.538)
C5': (50.125,126.326,103.997)
O4': (48.699,128.245,103.641)
C8: (50.276,130.453,102.825)
O2': (46.842,127.546,101.224)
C6: (49.533,133.475,101.186)
C5: (49.687,132.216,101.795)
C4: (48.628,131.335,101.690)
P: (52.613,126.953,104.632)
C4': (48.960,126.881,103.218)
C2': (48.151,128.066,101.324)
C2: (47.438,132.765,100.525)
N1: (48.375,133.717,100.539)
N3: (47.460,131.554,101.065)
N6: (50.453,134.442,101.215)
N7: (50.723,131.645,102.516)
N9: (49.012,130.200,102.362)
O5': (51.276,127.155,103.794)
O3': (48.876,125.757,101.094)
OP1: (51.342,145.171,99.473)
OP2: (53.367,143.646,99.856)
C3': (49.529,142.089,99.608)
C1': (50.457,140.170,100.641)
C5': (51.749,141.826,98.345)
O4': (50.530,140.014,99.234)
C8: (52.964,140.362,101.033)
O2': (49.315,141.771,102.049)
C6: (53.762,137.822,103.317)
C5: (53.295,138.774,102.402)
C4: (51.956,138.719,102.072)
P: (52.422,144.294,98.933)
C4': (50.353,141.298,98.593)
C2': (50.159,141.644,100.925)
C2: (51.610,136.989,103.371)
N1: (52.875,136.921,103.789)
N3: (51.052,137.837,102.527)
N6: (55.023,137.762,103.744)
N7: (53.924,139.812,101.731)
N9: (51.741,139.765,101.210)
O5': (51.707,143.207,98.020)
O3': (48.175,141.654,99.577)
OP2: (53.367,143.646,99.856)
C3': (49.529,142.089,99.608)
C1': (50.457,140.170,100.641)
C5': (51.749,141.826,98.345)
O4': (50.530,140.014,99.234)
C8: (52.964,140.362,101.033)
O2': (49.315,141.771,102.049)
C6: (53.762,137.822,103.317)
C5: (53.295,138.774,102.402)
C4: (51.956,138.719,102.072)
P: (52.422,144.294,98.933)
C4': (50.353,141.298,98.593)
C2': (50.159,141.644,100.925)
C2: (51.610,136.989,103.371)
N1: (52.875,136.921,103.789)
N3: (51.052,137.837,102.527)
N6: (55.023,137.762,103.744)
N7: (53.924,139.812,101.731)
N9: (51.741,139.765,101.210)
O5': (51.707,143.207,98.020)
O3': (48.175,141.654,99.577)
Image (generated by PyMOL):