Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQO:02041:02490
Extra
PDB:
ATOM 1 O3' G A2040 52.380 127.539 106.173 1.00 32.75 O
ATOM 2 P A A2041 52.793 127.447 104.621 1.00 32.72 P
ATOM 3 OP1 A A2041 53.267 126.064 104.383 1.00 31.72 O
ATOM 4 OP2 A A2041 53.663 128.580 104.257 1.00 30.35 O
ATOM 5 O5' A A2041 51.426 127.684 103.847 1.00 33.41 O
ATOM 6 C5' A A2041 50.297 126.820 104.031 1.00 33.74 C
ATOM 7 C4' A A2041 49.132 127.320 103.210 1.00 34.11 C
ATOM 8 O4' A A2041 48.813 128.679 103.610 1.00 34.74 O
ATOM 9 C3' A A2041 49.355 127.421 101.706 1.00 33.50 C
ATOM 10 O3' A A2041 49.102 126.154 101.108 1.00 35.89 O
ATOM 11 C2' A A2041 48.297 128.440 101.292 1.00 32.23 C
ATOM 12 O2' A A2041 47.011 127.854 101.207 1.00 33.12 O
ATOM 13 C1' A A2041 48.309 129.397 102.490 1.00 32.75 C
ATOM 14 N9 A A2041 49.112 130.609 102.310 1.00 31.49 N
ATOM 15 C8 A A2041 50.390 130.849 102.739 1.00 29.45 C
ATOM 16 N7 A A2041 50.838 132.040 102.426 1.00 30.49 N
ATOM 17 C5 A A2041 49.785 132.623 101.741 1.00 30.48 C
ATOM 18 C6 A A2041 49.627 133.881 101.144 1.00 29.75 C
ATOM 19 N6 A A2041 50.569 134.822 101.125 1.00 32.37 N
ATOM 20 N1 A A2041 48.447 134.145 100.551 1.00 34.09 N
ATOM 21 C2 A A2041 47.497 133.205 100.560 1.00 30.80 C
ATOM 22 N3 A A2041 47.527 131.991 101.083 1.00 32.34 N
ATOM 23 C4 A A2041 48.714 131.755 101.665 1.00 31.42 C
ATOM 24 P A A2042 49.719 125.794 99.665 1.00 36.41 P
ATOM 25 OP1 A A2042 49.713 126.999 98.802 1.00 34.73 O
ATOM 26 OP2 A A2042 49.007 124.576 99.222 1.00 34.99 O
ATOM 27 O5' A A2042 51.222 125.388 99.988 1.00 34.28 O
TER
ATOM 1 O3' U B2489 53.392 145.627 97.856 1.00 38.98 O
ATOM 2 P A B2490 52.543 144.822 98.959 1.00 39.98 P
ATOM 3 OP1 A B2490 51.507 145.738 99.492 1.00 42.80 O
ATOM 4 OP2 A B2490 53.479 144.174 99.887 1.00 43.01 O
ATOM 5 O5' A B2490 51.764 143.766 98.059 1.00 43.78 O
ATOM 6 C5' A B2490 51.880 142.371 98.274 1.00 40.71 C
ATOM 7 C4' A B2490 50.522 141.788 98.583 1.00 39.89 C
ATOM 8 O4' A B2490 50.775 140.524 99.235 1.00 39.34 O
ATOM 9 C3' A B2490 49.706 142.582 99.608 1.00 39.53 C
ATOM 10 O3' A B2490 48.352 142.152 99.629 1.00 40.69 O
ATOM 11 C2' A B2490 50.361 142.159 100.914 1.00 40.52 C
ATOM 12 O2' A B2490 49.524 142.297 102.040 1.00 42.00 O
ATOM 13 C1' A B2490 50.680 140.688 100.637 1.00 40.94 C
ATOM 14 N9 A B2490 51.959 140.307 101.222 1.00 40.70 N
ATOM 15 C8 A B2490 53.171 140.939 101.091 1.00 39.66 C
ATOM 16 N7 A B2490 54.121 140.406 101.809 1.00 39.22 N
ATOM 17 C5 A B2490 53.500 139.343 102.444 1.00 39.06 C
ATOM 18 C6 A B2490 53.960 138.405 103.366 1.00 37.88 C
ATOM 19 N6 A B2490 55.199 138.409 103.853 1.00 34.81 N
ATOM 20 N1 A B2490 53.091 137.460 103.793 1.00 38.44 N
ATOM 21 C2 A B2490 51.840 137.488 103.329 1.00 37.80 C
ATOM 22 N3 A B2490 51.281 138.338 102.472 1.00 37.61 N
ATOM 23 C4 A B2490 52.175 139.252 102.066 1.00 38.91 C
ATOM 24 P U B2491 47.225 142.929 98.787 1.00 41.84 P
ATOM 25 OP1 U B2491 47.827 143.584 97.598 1.00 41.95 O
ATOM 26 OP2 U B2491 46.400 143.711 99.715 1.00 41.51 O
ATOM 27 O5' U B2491 46.334 141.720 98.264 1.00 43.16 O
TER
ATOM 2 P A A2041 52.793 127.447 104.621 1.00 32.72 P
ATOM 3 OP1 A A2041 53.267 126.064 104.383 1.00 31.72 O
ATOM 4 OP2 A A2041 53.663 128.580 104.257 1.00 30.35 O
ATOM 5 O5' A A2041 51.426 127.684 103.847 1.00 33.41 O
ATOM 6 C5' A A2041 50.297 126.820 104.031 1.00 33.74 C
ATOM 7 C4' A A2041 49.132 127.320 103.210 1.00 34.11 C
ATOM 8 O4' A A2041 48.813 128.679 103.610 1.00 34.74 O
ATOM 9 C3' A A2041 49.355 127.421 101.706 1.00 33.50 C
ATOM 10 O3' A A2041 49.102 126.154 101.108 1.00 35.89 O
ATOM 11 C2' A A2041 48.297 128.440 101.292 1.00 32.23 C
ATOM 12 O2' A A2041 47.011 127.854 101.207 1.00 33.12 O
ATOM 13 C1' A A2041 48.309 129.397 102.490 1.00 32.75 C
ATOM 14 N9 A A2041 49.112 130.609 102.310 1.00 31.49 N
ATOM 15 C8 A A2041 50.390 130.849 102.739 1.00 29.45 C
ATOM 16 N7 A A2041 50.838 132.040 102.426 1.00 30.49 N
ATOM 17 C5 A A2041 49.785 132.623 101.741 1.00 30.48 C
ATOM 18 C6 A A2041 49.627 133.881 101.144 1.00 29.75 C
ATOM 19 N6 A A2041 50.569 134.822 101.125 1.00 32.37 N
ATOM 20 N1 A A2041 48.447 134.145 100.551 1.00 34.09 N
ATOM 21 C2 A A2041 47.497 133.205 100.560 1.00 30.80 C
ATOM 22 N3 A A2041 47.527 131.991 101.083 1.00 32.34 N
ATOM 23 C4 A A2041 48.714 131.755 101.665 1.00 31.42 C
ATOM 24 P A A2042 49.719 125.794 99.665 1.00 36.41 P
ATOM 25 OP1 A A2042 49.713 126.999 98.802 1.00 34.73 O
ATOM 26 OP2 A A2042 49.007 124.576 99.222 1.00 34.99 O
ATOM 27 O5' A A2042 51.222 125.388 99.988 1.00 34.28 O
TER
ATOM 1 O3' U B2489 53.392 145.627 97.856 1.00 38.98 O
ATOM 2 P A B2490 52.543 144.822 98.959 1.00 39.98 P
ATOM 3 OP1 A B2490 51.507 145.738 99.492 1.00 42.80 O
ATOM 4 OP2 A B2490 53.479 144.174 99.887 1.00 43.01 O
ATOM 5 O5' A B2490 51.764 143.766 98.059 1.00 43.78 O
ATOM 6 C5' A B2490 51.880 142.371 98.274 1.00 40.71 C
ATOM 7 C4' A B2490 50.522 141.788 98.583 1.00 39.89 C
ATOM 8 O4' A B2490 50.775 140.524 99.235 1.00 39.34 O
ATOM 9 C3' A B2490 49.706 142.582 99.608 1.00 39.53 C
ATOM 10 O3' A B2490 48.352 142.152 99.629 1.00 40.69 O
ATOM 11 C2' A B2490 50.361 142.159 100.914 1.00 40.52 C
ATOM 12 O2' A B2490 49.524 142.297 102.040 1.00 42.00 O
ATOM 13 C1' A B2490 50.680 140.688 100.637 1.00 40.94 C
ATOM 14 N9 A B2490 51.959 140.307 101.222 1.00 40.70 N
ATOM 15 C8 A B2490 53.171 140.939 101.091 1.00 39.66 C
ATOM 16 N7 A B2490 54.121 140.406 101.809 1.00 39.22 N
ATOM 17 C5 A B2490 53.500 139.343 102.444 1.00 39.06 C
ATOM 18 C6 A B2490 53.960 138.405 103.366 1.00 37.88 C
ATOM 19 N6 A B2490 55.199 138.409 103.853 1.00 34.81 N
ATOM 20 N1 A B2490 53.091 137.460 103.793 1.00 38.44 N
ATOM 21 C2 A B2490 51.840 137.488 103.329 1.00 37.80 C
ATOM 22 N3 A B2490 51.281 138.338 102.472 1.00 37.61 N
ATOM 23 C4 A B2490 52.175 139.252 102.066 1.00 38.91 C
ATOM 24 P U B2491 47.225 142.929 98.787 1.00 41.84 P
ATOM 25 OP1 U B2491 47.827 143.584 97.598 1.00 41.95 O
ATOM 26 OP2 U B2491 46.400 143.711 99.715 1.00 41.51 O
ATOM 27 O5' U B2491 46.334 141.720 98.264 1.00 43.16 O
TER
Atoms:
OP1: (53.267,126.064,104.383)
OP2: (53.663,128.580,104.257)
C3': (49.355,127.421,101.706)
C1': (48.309,129.397,102.490)
C5': (50.297,126.820,104.031)
O4': (48.813,128.679,103.610)
C8: (50.390,130.849,102.739)
O2': (47.011,127.854,101.207)
C6: (49.627,133.881,101.144)
C5: (49.785,132.623,101.741)
C4: (48.714,131.755,101.665)
P: (52.793,127.447,104.621)
C4': (49.132,127.320,103.210)
C2': (48.297,128.440,101.292)
C2: (47.497,133.205,100.560)
N1: (48.447,134.145,100.551)
N3: (47.527,131.991,101.083)
N6: (50.569,134.822,101.125)
N7: (50.838,132.040,102.426)
N9: (49.112,130.609,102.310)
O5': (51.426,127.684,103.847)
O3': (49.102,126.154,101.108)
OP2: (53.663,128.580,104.257)
C3': (49.355,127.421,101.706)
C1': (48.309,129.397,102.490)
C5': (50.297,126.820,104.031)
O4': (48.813,128.679,103.610)
C8: (50.390,130.849,102.739)
O2': (47.011,127.854,101.207)
C6: (49.627,133.881,101.144)
C5: (49.785,132.623,101.741)
C4: (48.714,131.755,101.665)
P: (52.793,127.447,104.621)
C4': (49.132,127.320,103.210)
C2': (48.297,128.440,101.292)
C2: (47.497,133.205,100.560)
N1: (48.447,134.145,100.551)
N3: (47.527,131.991,101.083)
N6: (50.569,134.822,101.125)
N7: (50.838,132.040,102.426)
N9: (49.112,130.609,102.310)
O5': (51.426,127.684,103.847)
O3': (49.102,126.154,101.108)
OP1: (51.507,145.738,99.492)
OP2: (53.479,144.174,99.887)
C3': (49.706,142.582,99.608)
C1': (50.680,140.688,100.637)
C5': (51.880,142.371,98.274)
O4': (50.775,140.524,99.235)
C8: (53.171,140.939,101.091)
O2': (49.524,142.297,102.040)
C6: (53.960,138.405,103.366)
C5: (53.500,139.343,102.444)
C4: (52.175,139.252,102.066)
P: (52.543,144.822,98.959)
C4': (50.522,141.788,98.583)
C2': (50.361,142.159,100.914)
C2: (51.840,137.488,103.329)
N1: (53.091,137.460,103.793)
N3: (51.281,138.338,102.472)
N6: (55.199,138.409,103.853)
N7: (54.121,140.406,101.809)
N9: (51.959,140.307,101.222)
O5': (51.764,143.766,98.059)
O3': (48.352,142.152,99.629)
OP2: (53.479,144.174,99.887)
C3': (49.706,142.582,99.608)
C1': (50.680,140.688,100.637)
C5': (51.880,142.371,98.274)
O4': (50.775,140.524,99.235)
C8: (53.171,140.939,101.091)
O2': (49.524,142.297,102.040)
C6: (53.960,138.405,103.366)
C5: (53.500,139.343,102.444)
C4: (52.175,139.252,102.066)
P: (52.543,144.822,98.959)
C4': (50.522,141.788,98.583)
C2': (50.361,142.159,100.914)
C2: (51.840,137.488,103.329)
N1: (53.091,137.460,103.793)
N3: (51.281,138.338,102.472)
N6: (55.199,138.409,103.853)
N7: (54.121,140.406,101.809)
N9: (51.959,140.307,101.222)
O5': (51.764,143.766,98.059)
O3': (48.352,142.152,99.629)
Image (generated by PyMOL):