Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQP:02041:02490
Extra
PDB:
ATOM 1 O3' G A2040 52.208 126.881 106.132 1.00 30.12 O
ATOM 2 P A A2041 52.668 126.812 104.590 1.00 30.63 P
ATOM 3 OP1 A A2041 53.197 125.450 104.375 1.00 29.18 O
ATOM 4 OP2 A A2041 53.507 127.984 104.233 1.00 29.31 O
ATOM 5 O5' A A2041 51.314 126.999 103.778 1.00 31.06 O
ATOM 6 C5' A A2041 50.174 126.173 104.016 1.00 29.08 C
ATOM 7 C4' A A2041 49.004 126.689 103.219 1.00 30.32 C
ATOM 8 O4' A A2041 48.739 128.063 103.604 1.00 30.53 O
ATOM 9 C3' A A2041 49.206 126.771 101.712 1.00 29.86 C
ATOM 10 O3' A A2041 48.946 125.503 101.121 1.00 32.12 O
ATOM 11 C2' A A2041 48.158 127.805 101.303 1.00 30.48 C
ATOM 12 O2' A A2041 46.856 127.250 101.231 1.00 31.52 O
ATOM 13 C1' A A2041 48.205 128.773 102.491 1.00 30.90 C
ATOM 14 N9 A A2041 48.993 129.990 102.277 1.00 29.86 N
ATOM 15 C8 A A2041 50.277 130.254 102.678 1.00 29.11 C
ATOM 16 N7 A A2041 50.702 131.449 102.344 1.00 31.07 N
ATOM 17 C5 A A2041 49.627 132.010 101.671 1.00 31.03 C
ATOM 18 C6 A A2041 49.437 133.262 101.058 1.00 31.06 C
ATOM 19 N6 A A2041 50.361 134.225 101.021 1.00 29.25 N
ATOM 20 N1 A A2041 48.240 133.498 100.478 1.00 33.44 N
ATOM 21 C2 A A2041 47.308 132.545 100.520 1.00 31.08 C
ATOM 22 N3 A A2041 47.365 131.336 101.061 1.00 32.42 N
ATOM 23 C4 A A2041 48.566 131.124 101.625 1.00 31.24 C
ATOM 24 P A A2042 49.558 125.137 99.679 1.00 33.24 P
ATOM 25 OP1 A A2042 49.595 126.348 98.817 1.00 33.50 O
ATOM 26 OP2 A A2042 48.816 123.943 99.228 1.00 33.01 O
ATOM 27 O5' A A2042 51.053 124.696 99.997 1.00 32.44 O
TER
ATOM 1 O3' U B2489 53.241 144.919 97.801 1.00 32.71 O
ATOM 2 P A B2490 52.386 144.093 98.886 1.00 35.35 P
ATOM 3 OP1 A B2490 51.327 144.988 99.416 1.00 36.21 O
ATOM 4 OP2 A B2490 53.313 143.441 99.815 1.00 36.41 O
ATOM 5 O5' A B2490 51.645 143.024 97.969 1.00 37.94 O
ATOM 6 C5' A B2490 51.698 141.640 98.255 1.00 35.35 C
ATOM 7 C4' A B2490 50.310 141.115 98.560 1.00 34.23 C
ATOM 8 O4' A B2490 50.513 139.825 99.177 1.00 34.40 O
ATOM 9 C3' A B2490 49.523 141.904 99.610 1.00 34.26 C
ATOM 10 O3' A B2490 48.160 141.490 99.633 1.00 36.40 O
ATOM 11 C2' A B2490 50.176 141.429 100.902 1.00 33.95 C
ATOM 12 O2' A B2490 49.337 141.517 102.029 1.00 34.74 O
ATOM 13 C1' A B2490 50.460 139.959 100.588 1.00 35.04 C
ATOM 14 N9 A B2490 51.752 139.557 101.132 1.00 33.83 N
ATOM 15 C8 A B2490 52.966 140.169 100.942 1.00 32.97 C
ATOM 16 N7 A B2490 53.939 139.630 101.629 1.00 33.76 N
ATOM 17 C5 A B2490 53.330 138.583 102.303 1.00 33.23 C
ATOM 18 C6 A B2490 53.819 137.638 103.209 1.00 33.05 C
ATOM 19 N6 A B2490 55.083 137.600 103.622 1.00 32.28 N
ATOM 20 N1 A B2490 52.951 136.720 103.687 1.00 32.36 N
ATOM 21 C2 A B2490 51.682 136.767 103.278 1.00 29.24 C
ATOM 22 N3 A B2490 51.102 137.613 102.442 1.00 30.74 N
ATOM 23 C4 A B2490 51.989 138.510 101.984 1.00 32.32 C
ATOM 24 P U B2491 47.038 142.280 98.793 1.00 39.00 P
ATOM 25 OP1 U B2491 47.637 142.864 97.558 1.00 37.20 O
ATOM 26 OP2 U B2491 46.264 143.133 99.715 1.00 38.14 O
ATOM 27 O5' U B2491 46.086 141.086 98.349 1.00 39.95 O
TER
ATOM 2 P A A2041 52.668 126.812 104.590 1.00 30.63 P
ATOM 3 OP1 A A2041 53.197 125.450 104.375 1.00 29.18 O
ATOM 4 OP2 A A2041 53.507 127.984 104.233 1.00 29.31 O
ATOM 5 O5' A A2041 51.314 126.999 103.778 1.00 31.06 O
ATOM 6 C5' A A2041 50.174 126.173 104.016 1.00 29.08 C
ATOM 7 C4' A A2041 49.004 126.689 103.219 1.00 30.32 C
ATOM 8 O4' A A2041 48.739 128.063 103.604 1.00 30.53 O
ATOM 9 C3' A A2041 49.206 126.771 101.712 1.00 29.86 C
ATOM 10 O3' A A2041 48.946 125.503 101.121 1.00 32.12 O
ATOM 11 C2' A A2041 48.158 127.805 101.303 1.00 30.48 C
ATOM 12 O2' A A2041 46.856 127.250 101.231 1.00 31.52 O
ATOM 13 C1' A A2041 48.205 128.773 102.491 1.00 30.90 C
ATOM 14 N9 A A2041 48.993 129.990 102.277 1.00 29.86 N
ATOM 15 C8 A A2041 50.277 130.254 102.678 1.00 29.11 C
ATOM 16 N7 A A2041 50.702 131.449 102.344 1.00 31.07 N
ATOM 17 C5 A A2041 49.627 132.010 101.671 1.00 31.03 C
ATOM 18 C6 A A2041 49.437 133.262 101.058 1.00 31.06 C
ATOM 19 N6 A A2041 50.361 134.225 101.021 1.00 29.25 N
ATOM 20 N1 A A2041 48.240 133.498 100.478 1.00 33.44 N
ATOM 21 C2 A A2041 47.308 132.545 100.520 1.00 31.08 C
ATOM 22 N3 A A2041 47.365 131.336 101.061 1.00 32.42 N
ATOM 23 C4 A A2041 48.566 131.124 101.625 1.00 31.24 C
ATOM 24 P A A2042 49.558 125.137 99.679 1.00 33.24 P
ATOM 25 OP1 A A2042 49.595 126.348 98.817 1.00 33.50 O
ATOM 26 OP2 A A2042 48.816 123.943 99.228 1.00 33.01 O
ATOM 27 O5' A A2042 51.053 124.696 99.997 1.00 32.44 O
TER
ATOM 1 O3' U B2489 53.241 144.919 97.801 1.00 32.71 O
ATOM 2 P A B2490 52.386 144.093 98.886 1.00 35.35 P
ATOM 3 OP1 A B2490 51.327 144.988 99.416 1.00 36.21 O
ATOM 4 OP2 A B2490 53.313 143.441 99.815 1.00 36.41 O
ATOM 5 O5' A B2490 51.645 143.024 97.969 1.00 37.94 O
ATOM 6 C5' A B2490 51.698 141.640 98.255 1.00 35.35 C
ATOM 7 C4' A B2490 50.310 141.115 98.560 1.00 34.23 C
ATOM 8 O4' A B2490 50.513 139.825 99.177 1.00 34.40 O
ATOM 9 C3' A B2490 49.523 141.904 99.610 1.00 34.26 C
ATOM 10 O3' A B2490 48.160 141.490 99.633 1.00 36.40 O
ATOM 11 C2' A B2490 50.176 141.429 100.902 1.00 33.95 C
ATOM 12 O2' A B2490 49.337 141.517 102.029 1.00 34.74 O
ATOM 13 C1' A B2490 50.460 139.959 100.588 1.00 35.04 C
ATOM 14 N9 A B2490 51.752 139.557 101.132 1.00 33.83 N
ATOM 15 C8 A B2490 52.966 140.169 100.942 1.00 32.97 C
ATOM 16 N7 A B2490 53.939 139.630 101.629 1.00 33.76 N
ATOM 17 C5 A B2490 53.330 138.583 102.303 1.00 33.23 C
ATOM 18 C6 A B2490 53.819 137.638 103.209 1.00 33.05 C
ATOM 19 N6 A B2490 55.083 137.600 103.622 1.00 32.28 N
ATOM 20 N1 A B2490 52.951 136.720 103.687 1.00 32.36 N
ATOM 21 C2 A B2490 51.682 136.767 103.278 1.00 29.24 C
ATOM 22 N3 A B2490 51.102 137.613 102.442 1.00 30.74 N
ATOM 23 C4 A B2490 51.989 138.510 101.984 1.00 32.32 C
ATOM 24 P U B2491 47.038 142.280 98.793 1.00 39.00 P
ATOM 25 OP1 U B2491 47.637 142.864 97.558 1.00 37.20 O
ATOM 26 OP2 U B2491 46.264 143.133 99.715 1.00 38.14 O
ATOM 27 O5' U B2491 46.086 141.086 98.349 1.00 39.95 O
TER
Atoms:
OP1: (53.197,125.450,104.375)
OP2: (53.507,127.984,104.233)
C3': (49.206,126.771,101.712)
C1': (48.205,128.773,102.491)
C5': (50.174,126.173,104.016)
O4': (48.739,128.063,103.604)
C8: (50.277,130.254,102.678)
O2': (46.856,127.250,101.231)
C6: (49.437,133.262,101.058)
C5: (49.627,132.010,101.671)
C4: (48.566,131.124,101.625)
P: (52.668,126.812,104.590)
C4': (49.004,126.689,103.219)
C2': (48.158,127.805,101.303)
C2: (47.308,132.545,100.520)
N1: (48.240,133.498,100.478)
N3: (47.365,131.336,101.061)
N6: (50.361,134.225,101.021)
N7: (50.702,131.449,102.344)
N9: (48.993,129.990,102.277)
O5': (51.314,126.999,103.778)
O3': (48.946,125.503,101.121)
OP2: (53.507,127.984,104.233)
C3': (49.206,126.771,101.712)
C1': (48.205,128.773,102.491)
C5': (50.174,126.173,104.016)
O4': (48.739,128.063,103.604)
C8: (50.277,130.254,102.678)
O2': (46.856,127.250,101.231)
C6: (49.437,133.262,101.058)
C5: (49.627,132.010,101.671)
C4: (48.566,131.124,101.625)
P: (52.668,126.812,104.590)
C4': (49.004,126.689,103.219)
C2': (48.158,127.805,101.303)
C2: (47.308,132.545,100.520)
N1: (48.240,133.498,100.478)
N3: (47.365,131.336,101.061)
N6: (50.361,134.225,101.021)
N7: (50.702,131.449,102.344)
N9: (48.993,129.990,102.277)
O5': (51.314,126.999,103.778)
O3': (48.946,125.503,101.121)
OP1: (51.327,144.988,99.416)
OP2: (53.313,143.441,99.815)
C3': (49.523,141.904,99.610)
C1': (50.460,139.959,100.588)
C5': (51.698,141.640,98.255)
O4': (50.513,139.825,99.177)
C8: (52.966,140.169,100.942)
O2': (49.337,141.517,102.029)
C6: (53.819,137.638,103.209)
C5: (53.330,138.583,102.303)
C4: (51.989,138.510,101.984)
P: (52.386,144.093,98.886)
C4': (50.310,141.115,98.560)
C2': (50.176,141.429,100.902)
C2: (51.682,136.767,103.278)
N1: (52.951,136.720,103.687)
N3: (51.102,137.613,102.442)
N6: (55.083,137.600,103.622)
N7: (53.939,139.630,101.629)
N9: (51.752,139.557,101.132)
O5': (51.645,143.024,97.969)
O3': (48.160,141.490,99.633)
OP2: (53.313,143.441,99.815)
C3': (49.523,141.904,99.610)
C1': (50.460,139.959,100.588)
C5': (51.698,141.640,98.255)
O4': (50.513,139.825,99.177)
C8: (52.966,140.169,100.942)
O2': (49.337,141.517,102.029)
C6: (53.819,137.638,103.209)
C5: (53.330,138.583,102.303)
C4: (51.989,138.510,101.984)
P: (52.386,144.093,98.886)
C4': (50.310,141.115,98.560)
C2': (50.176,141.429,100.902)
C2: (51.682,136.767,103.278)
N1: (52.951,136.720,103.687)
N3: (51.102,137.613,102.442)
N6: (55.083,137.600,103.622)
N7: (53.939,139.630,101.629)
N9: (51.752,139.557,101.132)
O5': (51.645,143.024,97.969)
O3': (48.160,141.490,99.633)
Image (generated by PyMOL):