Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YHQ:02041:02490
Extra
PDB:
ATOM 1 O3' G A2040 52.238 127.348 106.128 1.00 23.69 O
ATOM 2 P A A2041 52.701 127.246 104.589 1.00 22.71 P
ATOM 3 OP1 A A2041 53.106 125.838 104.415 1.00 23.19 O
ATOM 4 OP2 A A2041 53.654 128.329 104.243 1.00 23.84 O
ATOM 5 O5' A A2041 51.360 127.501 103.770 1.00 24.43 O
ATOM 6 C5' A A2041 50.211 126.663 103.977 1.00 21.38 C
ATOM 7 C4' A A2041 49.046 127.156 103.166 1.00 19.84 C
ATOM 8 O4' A A2041 48.703 128.504 103.570 1.00 21.18 O
ATOM 9 C3' A A2041 49.262 127.257 101.664 1.00 22.48 C
ATOM 10 O3' A A2041 49.050 125.987 101.065 1.00 22.72 O
ATOM 11 C2' A A2041 48.172 128.246 101.256 1.00 22.42 C
ATOM 12 O2' A A2041 46.909 127.615 101.150 1.00 24.71 O
ATOM 13 C1' A A2041 48.161 129.206 102.456 1.00 21.58 C
ATOM 14 N9 A A2041 48.923 130.444 102.265 1.00 22.56 N
ATOM 15 C8 A A2041 50.189 130.738 102.720 1.00 23.04 C
ATOM 16 N7 A A2041 50.601 131.942 102.402 1.00 24.14 N
ATOM 17 C5 A A2041 49.545 132.476 101.679 1.00 24.35 C
ATOM 18 C6 A A2041 49.363 133.718 101.048 1.00 25.06 C
ATOM 19 N6 A A2041 50.290 134.685 101.021 1.00 20.93 N
ATOM 20 N1 A A2041 48.182 133.936 100.424 1.00 26.33 N
ATOM 21 C2 A A2041 47.265 132.965 100.429 1.00 23.07 C
ATOM 22 N3 A A2041 47.324 131.754 100.973 1.00 25.11 N
ATOM 23 C4 A A2041 48.501 131.567 101.591 1.00 24.20 C
ATOM 24 P A A2042 49.738 125.625 99.657 1.00 25.07 P
ATOM 25 OP1 A A2042 49.762 126.839 98.798 1.00 25.66 O
ATOM 26 OP2 A A2042 49.054 124.400 99.175 1.00 23.89 O
ATOM 27 O5' A A2042 51.220 125.204 100.052 1.00 23.47 O
TER
ATOM 1 O3' U B2489 53.233 145.347 97.869 1.00 27.99 O
ATOM 2 P A B2490 52.338 144.603 98.973 1.00 28.12 P
ATOM 3 OP1 A B2490 51.368 145.584 99.505 1.00 29.40 O
ATOM 4 OP2 A B2490 53.232 143.891 99.901 1.00 29.61 O
ATOM 5 O5' A B2490 51.476 143.594 98.094 1.00 33.93 O
ATOM 6 C5' A B2490 51.595 142.190 98.240 1.00 31.10 C
ATOM 7 C4' A B2490 50.257 141.599 98.597 1.00 30.63 C
ATOM 8 O4' A B2490 50.540 140.329 99.234 1.00 31.49 O
ATOM 9 C3' A B2490 49.462 142.375 99.648 1.00 30.27 C
ATOM 10 O3' A B2490 48.116 141.915 99.678 1.00 29.90 O
ATOM 11 C2' A B2490 50.154 141.942 100.934 1.00 30.39 C
ATOM 12 O2' A B2490 49.339 142.017 102.085 1.00 34.83 O
ATOM 13 C1' A B2490 50.478 140.479 100.637 1.00 30.10 C
ATOM 14 N9 A B2490 51.773 140.105 101.190 1.00 29.44 N
ATOM 15 C8 A B2490 52.983 140.720 101.002 1.00 27.39 C
ATOM 16 N7 A B2490 53.958 140.182 101.689 1.00 29.14 N
ATOM 17 C5 A B2490 53.352 139.133 102.363 1.00 27.15 C
ATOM 18 C6 A B2490 53.846 138.180 103.259 1.00 26.87 C
ATOM 19 N6 A B2490 55.112 138.142 103.669 1.00 26.33 N
ATOM 20 N1 A B2490 52.980 137.256 103.734 1.00 27.15 N
ATOM 21 C2 A B2490 51.703 137.312 103.338 1.00 25.65 C
ATOM 22 N3 A B2490 51.118 138.170 102.511 1.00 23.77 N
ATOM 23 C4 A B2490 52.009 139.063 102.052 1.00 26.88 C
ATOM 24 P U B2491 46.936 142.751 98.972 1.00 31.36 P
ATOM 25 OP1 U B2491 47.477 143.549 97.843 1.00 33.06 O
ATOM 26 OP2 U B2491 46.148 143.412 100.023 1.00 30.32 O
ATOM 27 O5' U B2491 46.038 141.575 98.386 1.00 33.33 O
TER
ATOM 2 P A A2041 52.701 127.246 104.589 1.00 22.71 P
ATOM 3 OP1 A A2041 53.106 125.838 104.415 1.00 23.19 O
ATOM 4 OP2 A A2041 53.654 128.329 104.243 1.00 23.84 O
ATOM 5 O5' A A2041 51.360 127.501 103.770 1.00 24.43 O
ATOM 6 C5' A A2041 50.211 126.663 103.977 1.00 21.38 C
ATOM 7 C4' A A2041 49.046 127.156 103.166 1.00 19.84 C
ATOM 8 O4' A A2041 48.703 128.504 103.570 1.00 21.18 O
ATOM 9 C3' A A2041 49.262 127.257 101.664 1.00 22.48 C
ATOM 10 O3' A A2041 49.050 125.987 101.065 1.00 22.72 O
ATOM 11 C2' A A2041 48.172 128.246 101.256 1.00 22.42 C
ATOM 12 O2' A A2041 46.909 127.615 101.150 1.00 24.71 O
ATOM 13 C1' A A2041 48.161 129.206 102.456 1.00 21.58 C
ATOM 14 N9 A A2041 48.923 130.444 102.265 1.00 22.56 N
ATOM 15 C8 A A2041 50.189 130.738 102.720 1.00 23.04 C
ATOM 16 N7 A A2041 50.601 131.942 102.402 1.00 24.14 N
ATOM 17 C5 A A2041 49.545 132.476 101.679 1.00 24.35 C
ATOM 18 C6 A A2041 49.363 133.718 101.048 1.00 25.06 C
ATOM 19 N6 A A2041 50.290 134.685 101.021 1.00 20.93 N
ATOM 20 N1 A A2041 48.182 133.936 100.424 1.00 26.33 N
ATOM 21 C2 A A2041 47.265 132.965 100.429 1.00 23.07 C
ATOM 22 N3 A A2041 47.324 131.754 100.973 1.00 25.11 N
ATOM 23 C4 A A2041 48.501 131.567 101.591 1.00 24.20 C
ATOM 24 P A A2042 49.738 125.625 99.657 1.00 25.07 P
ATOM 25 OP1 A A2042 49.762 126.839 98.798 1.00 25.66 O
ATOM 26 OP2 A A2042 49.054 124.400 99.175 1.00 23.89 O
ATOM 27 O5' A A2042 51.220 125.204 100.052 1.00 23.47 O
TER
ATOM 1 O3' U B2489 53.233 145.347 97.869 1.00 27.99 O
ATOM 2 P A B2490 52.338 144.603 98.973 1.00 28.12 P
ATOM 3 OP1 A B2490 51.368 145.584 99.505 1.00 29.40 O
ATOM 4 OP2 A B2490 53.232 143.891 99.901 1.00 29.61 O
ATOM 5 O5' A B2490 51.476 143.594 98.094 1.00 33.93 O
ATOM 6 C5' A B2490 51.595 142.190 98.240 1.00 31.10 C
ATOM 7 C4' A B2490 50.257 141.599 98.597 1.00 30.63 C
ATOM 8 O4' A B2490 50.540 140.329 99.234 1.00 31.49 O
ATOM 9 C3' A B2490 49.462 142.375 99.648 1.00 30.27 C
ATOM 10 O3' A B2490 48.116 141.915 99.678 1.00 29.90 O
ATOM 11 C2' A B2490 50.154 141.942 100.934 1.00 30.39 C
ATOM 12 O2' A B2490 49.339 142.017 102.085 1.00 34.83 O
ATOM 13 C1' A B2490 50.478 140.479 100.637 1.00 30.10 C
ATOM 14 N9 A B2490 51.773 140.105 101.190 1.00 29.44 N
ATOM 15 C8 A B2490 52.983 140.720 101.002 1.00 27.39 C
ATOM 16 N7 A B2490 53.958 140.182 101.689 1.00 29.14 N
ATOM 17 C5 A B2490 53.352 139.133 102.363 1.00 27.15 C
ATOM 18 C6 A B2490 53.846 138.180 103.259 1.00 26.87 C
ATOM 19 N6 A B2490 55.112 138.142 103.669 1.00 26.33 N
ATOM 20 N1 A B2490 52.980 137.256 103.734 1.00 27.15 N
ATOM 21 C2 A B2490 51.703 137.312 103.338 1.00 25.65 C
ATOM 22 N3 A B2490 51.118 138.170 102.511 1.00 23.77 N
ATOM 23 C4 A B2490 52.009 139.063 102.052 1.00 26.88 C
ATOM 24 P U B2491 46.936 142.751 98.972 1.00 31.36 P
ATOM 25 OP1 U B2491 47.477 143.549 97.843 1.00 33.06 O
ATOM 26 OP2 U B2491 46.148 143.412 100.023 1.00 30.32 O
ATOM 27 O5' U B2491 46.038 141.575 98.386 1.00 33.33 O
TER
Atoms:
OP1: (53.106,125.838,104.415)
OP2: (53.654,128.329,104.243)
C3': (49.262,127.257,101.664)
C1': (48.161,129.206,102.456)
C5': (50.211,126.663,103.977)
O4': (48.703,128.504,103.570)
C8: (50.189,130.738,102.720)
O2': (46.909,127.615,101.150)
C6: (49.363,133.718,101.048)
C5: (49.545,132.476,101.679)
C4: (48.501,131.567,101.591)
P: (52.701,127.246,104.589)
C4': (49.046,127.156,103.166)
C2': (48.172,128.246,101.256)
C2: (47.265,132.965,100.429)
N1: (48.182,133.936,100.424)
N3: (47.324,131.754,100.973)
N6: (50.290,134.685,101.021)
N7: (50.601,131.942,102.402)
N9: (48.923,130.444,102.265)
O5': (51.360,127.501,103.770)
O3': (49.050,125.987,101.065)
OP2: (53.654,128.329,104.243)
C3': (49.262,127.257,101.664)
C1': (48.161,129.206,102.456)
C5': (50.211,126.663,103.977)
O4': (48.703,128.504,103.570)
C8: (50.189,130.738,102.720)
O2': (46.909,127.615,101.150)
C6: (49.363,133.718,101.048)
C5: (49.545,132.476,101.679)
C4: (48.501,131.567,101.591)
P: (52.701,127.246,104.589)
C4': (49.046,127.156,103.166)
C2': (48.172,128.246,101.256)
C2: (47.265,132.965,100.429)
N1: (48.182,133.936,100.424)
N3: (47.324,131.754,100.973)
N6: (50.290,134.685,101.021)
N7: (50.601,131.942,102.402)
N9: (48.923,130.444,102.265)
O5': (51.360,127.501,103.770)
O3': (49.050,125.987,101.065)
OP1: (51.368,145.584,99.505)
OP2: (53.232,143.891,99.901)
C3': (49.462,142.375,99.648)
C1': (50.478,140.479,100.637)
C5': (51.595,142.190,98.240)
O4': (50.540,140.329,99.234)
C8: (52.983,140.720,101.002)
O2': (49.339,142.017,102.085)
C6: (53.846,138.180,103.259)
C5: (53.352,139.133,102.363)
C4: (52.009,139.063,102.052)
P: (52.338,144.603,98.973)
C4': (50.257,141.599,98.597)
C2': (50.154,141.942,100.934)
C2: (51.703,137.312,103.338)
N1: (52.980,137.256,103.734)
N3: (51.118,138.170,102.511)
N6: (55.112,138.142,103.669)
N7: (53.958,140.182,101.689)
N9: (51.773,140.105,101.190)
O5': (51.476,143.594,98.094)
O3': (48.116,141.915,99.678)
OP2: (53.232,143.891,99.901)
C3': (49.462,142.375,99.648)
C1': (50.478,140.479,100.637)
C5': (51.595,142.190,98.240)
O4': (50.540,140.329,99.234)
C8: (52.983,140.720,101.002)
O2': (49.339,142.017,102.085)
C6: (53.846,138.180,103.259)
C5: (53.352,139.133,102.363)
C4: (52.009,139.063,102.052)
P: (52.338,144.603,98.973)
C4': (50.257,141.599,98.597)
C2': (50.154,141.942,100.934)
C2: (51.703,137.312,103.338)
N1: (52.980,137.256,103.734)
N3: (51.118,138.170,102.511)
N6: (55.112,138.142,103.669)
N7: (53.958,140.182,101.689)
N9: (51.773,140.105,101.190)
O5': (51.476,143.594,98.094)
O3': (48.116,141.915,99.678)
Image (generated by PyMOL):