Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YI2:02041:02490
Extra
PDB:
ATOM 1 O3' G A2040 52.217 127.878 106.043 1.00 32.97 O
ATOM 2 P A A2041 52.700 127.767 104.510 1.00 32.81 P
ATOM 3 OP1 A A2041 53.137 126.369 104.316 1.00 31.72 O
ATOM 4 OP2 A A2041 53.639 128.876 104.195 1.00 32.37 O
ATOM 5 O5' A A2041 51.365 127.998 103.672 1.00 32.54 O
ATOM 6 C5' A A2041 50.229 127.132 103.844 1.00 30.75 C
ATOM 7 C4' A A2041 49.044 127.656 103.072 1.00 31.15 C
ATOM 8 O4' A A2041 48.751 129.009 103.503 1.00 32.09 O
ATOM 9 C3' A A2041 49.205 127.784 101.563 1.00 31.74 C
ATOM 10 O3' A A2041 48.945 126.545 100.924 1.00 33.36 O
ATOM 11 C2' A A2041 48.116 128.789 101.217 1.00 31.77 C
ATOM 12 O2' A A2041 46.837 128.181 101.191 1.00 32.54 O
ATOM 13 C1' A A2041 48.178 129.734 102.423 1.00 32.62 C
ATOM 14 N9 A A2041 48.947 130.966 102.205 1.00 33.40 N
ATOM 15 C8 A A2041 50.208 131.273 102.657 1.00 34.55 C
ATOM 16 N7 A A2041 50.621 132.468 102.306 1.00 35.07 N
ATOM 17 C5 A A2041 49.566 132.982 101.566 1.00 34.13 C
ATOM 18 C6 A A2041 49.377 134.215 100.912 1.00 33.80 C
ATOM 19 N6 A A2041 50.287 135.196 100.891 1.00 30.29 N
ATOM 20 N1 A A2041 48.202 134.408 100.271 1.00 31.37 N
ATOM 21 C2 A A2041 47.293 133.434 100.295 1.00 30.34 C
ATOM 22 N3 A A2041 47.352 132.240 100.869 1.00 32.25 N
ATOM 23 C4 A A2041 48.527 132.069 101.496 1.00 33.27 C
ATOM 24 P A A2042 49.705 126.163 99.561 1.00 37.84 P
ATOM 25 OP1 A A2042 49.780 127.367 98.679 1.00 37.61 O
ATOM 26 OP2 A A2042 49.036 124.937 99.070 1.00 35.57 O
ATOM 27 O5' A A2042 51.179 125.779 100.028 1.00 34.19 O
TER
ATOM 1 O3' U B2489 53.311 145.842 97.732 1.00 36.52 O
ATOM 2 P A B2490 52.477 145.152 98.911 1.00 35.99 P
ATOM 3 OP1 A B2490 51.637 146.191 99.523 1.00 38.01 O
ATOM 4 OP2 A B2490 53.411 144.390 99.756 1.00 39.79 O
ATOM 5 O5' A B2490 51.483 144.184 98.129 1.00 39.40 O
ATOM 6 C5' A B2490 51.605 142.774 98.206 1.00 38.53 C
ATOM 7 C4' A B2490 50.265 142.155 98.513 1.00 39.84 C
ATOM 8 O4' A B2490 50.532 140.878 99.142 1.00 41.70 O
ATOM 9 C3' A B2490 49.419 142.893 99.544 1.00 41.58 C
ATOM 10 O3' A B2490 48.084 142.391 99.508 1.00 41.67 O
ATOM 11 C2' A B2490 50.084 142.466 100.847 1.00 42.10 C
ATOM 12 O2' A B2490 49.232 142.543 101.971 1.00 44.19 O
ATOM 13 C1' A B2490 50.445 141.010 100.548 1.00 41.63 C
ATOM 14 N9 A B2490 51.742 140.646 101.111 1.00 40.67 N
ATOM 15 C8 A B2490 52.944 141.269 100.903 1.00 38.53 C
ATOM 16 N7 A B2490 53.931 140.744 101.577 1.00 40.58 N
ATOM 17 C5 A B2490 53.344 139.697 102.270 1.00 40.31 C
ATOM 18 C6 A B2490 53.858 138.763 103.175 1.00 41.01 C
ATOM 19 N6 A B2490 55.135 138.740 103.563 1.00 42.53 N
ATOM 20 N1 A B2490 53.006 137.847 103.685 1.00 39.96 N
ATOM 21 C2 A B2490 51.725 137.889 103.311 1.00 38.25 C
ATOM 22 N3 A B2490 51.122 138.725 102.477 1.00 38.65 N
ATOM 23 C4 A B2490 51.998 139.616 101.983 1.00 40.09 C
ATOM 24 P U B2491 46.904 143.230 98.805 1.00 41.93 P
ATOM 25 OP1 U B2491 47.470 144.085 97.726 1.00 42.85 O
ATOM 26 OP2 U B2491 46.087 143.842 99.869 1.00 40.29 O
ATOM 27 O5' U B2491 46.041 142.062 98.152 1.00 41.57 O
TER
ATOM 2 P A A2041 52.700 127.767 104.510 1.00 32.81 P
ATOM 3 OP1 A A2041 53.137 126.369 104.316 1.00 31.72 O
ATOM 4 OP2 A A2041 53.639 128.876 104.195 1.00 32.37 O
ATOM 5 O5' A A2041 51.365 127.998 103.672 1.00 32.54 O
ATOM 6 C5' A A2041 50.229 127.132 103.844 1.00 30.75 C
ATOM 7 C4' A A2041 49.044 127.656 103.072 1.00 31.15 C
ATOM 8 O4' A A2041 48.751 129.009 103.503 1.00 32.09 O
ATOM 9 C3' A A2041 49.205 127.784 101.563 1.00 31.74 C
ATOM 10 O3' A A2041 48.945 126.545 100.924 1.00 33.36 O
ATOM 11 C2' A A2041 48.116 128.789 101.217 1.00 31.77 C
ATOM 12 O2' A A2041 46.837 128.181 101.191 1.00 32.54 O
ATOM 13 C1' A A2041 48.178 129.734 102.423 1.00 32.62 C
ATOM 14 N9 A A2041 48.947 130.966 102.205 1.00 33.40 N
ATOM 15 C8 A A2041 50.208 131.273 102.657 1.00 34.55 C
ATOM 16 N7 A A2041 50.621 132.468 102.306 1.00 35.07 N
ATOM 17 C5 A A2041 49.566 132.982 101.566 1.00 34.13 C
ATOM 18 C6 A A2041 49.377 134.215 100.912 1.00 33.80 C
ATOM 19 N6 A A2041 50.287 135.196 100.891 1.00 30.29 N
ATOM 20 N1 A A2041 48.202 134.408 100.271 1.00 31.37 N
ATOM 21 C2 A A2041 47.293 133.434 100.295 1.00 30.34 C
ATOM 22 N3 A A2041 47.352 132.240 100.869 1.00 32.25 N
ATOM 23 C4 A A2041 48.527 132.069 101.496 1.00 33.27 C
ATOM 24 P A A2042 49.705 126.163 99.561 1.00 37.84 P
ATOM 25 OP1 A A2042 49.780 127.367 98.679 1.00 37.61 O
ATOM 26 OP2 A A2042 49.036 124.937 99.070 1.00 35.57 O
ATOM 27 O5' A A2042 51.179 125.779 100.028 1.00 34.19 O
TER
ATOM 1 O3' U B2489 53.311 145.842 97.732 1.00 36.52 O
ATOM 2 P A B2490 52.477 145.152 98.911 1.00 35.99 P
ATOM 3 OP1 A B2490 51.637 146.191 99.523 1.00 38.01 O
ATOM 4 OP2 A B2490 53.411 144.390 99.756 1.00 39.79 O
ATOM 5 O5' A B2490 51.483 144.184 98.129 1.00 39.40 O
ATOM 6 C5' A B2490 51.605 142.774 98.206 1.00 38.53 C
ATOM 7 C4' A B2490 50.265 142.155 98.513 1.00 39.84 C
ATOM 8 O4' A B2490 50.532 140.878 99.142 1.00 41.70 O
ATOM 9 C3' A B2490 49.419 142.893 99.544 1.00 41.58 C
ATOM 10 O3' A B2490 48.084 142.391 99.508 1.00 41.67 O
ATOM 11 C2' A B2490 50.084 142.466 100.847 1.00 42.10 C
ATOM 12 O2' A B2490 49.232 142.543 101.971 1.00 44.19 O
ATOM 13 C1' A B2490 50.445 141.010 100.548 1.00 41.63 C
ATOM 14 N9 A B2490 51.742 140.646 101.111 1.00 40.67 N
ATOM 15 C8 A B2490 52.944 141.269 100.903 1.00 38.53 C
ATOM 16 N7 A B2490 53.931 140.744 101.577 1.00 40.58 N
ATOM 17 C5 A B2490 53.344 139.697 102.270 1.00 40.31 C
ATOM 18 C6 A B2490 53.858 138.763 103.175 1.00 41.01 C
ATOM 19 N6 A B2490 55.135 138.740 103.563 1.00 42.53 N
ATOM 20 N1 A B2490 53.006 137.847 103.685 1.00 39.96 N
ATOM 21 C2 A B2490 51.725 137.889 103.311 1.00 38.25 C
ATOM 22 N3 A B2490 51.122 138.725 102.477 1.00 38.65 N
ATOM 23 C4 A B2490 51.998 139.616 101.983 1.00 40.09 C
ATOM 24 P U B2491 46.904 143.230 98.805 1.00 41.93 P
ATOM 25 OP1 U B2491 47.470 144.085 97.726 1.00 42.85 O
ATOM 26 OP2 U B2491 46.087 143.842 99.869 1.00 40.29 O
ATOM 27 O5' U B2491 46.041 142.062 98.152 1.00 41.57 O
TER
Atoms:
OP1: (53.137,126.369,104.316)
OP2: (53.639,128.876,104.195)
C3': (49.205,127.784,101.563)
C1': (48.178,129.734,102.423)
C5': (50.229,127.132,103.844)
O4': (48.751,129.009,103.503)
C8: (50.208,131.273,102.657)
O2': (46.837,128.181,101.191)
C6: (49.377,134.215,100.912)
C5: (49.566,132.982,101.566)
C4: (48.527,132.069,101.496)
P: (52.700,127.767,104.510)
C4': (49.044,127.656,103.072)
C2': (48.116,128.789,101.217)
C2: (47.293,133.434,100.295)
N1: (48.202,134.408,100.271)
N3: (47.352,132.240,100.869)
N6: (50.287,135.196,100.891)
N7: (50.621,132.468,102.306)
N9: (48.947,130.966,102.205)
O5': (51.365,127.998,103.672)
O3': (48.945,126.545,100.924)
OP2: (53.639,128.876,104.195)
C3': (49.205,127.784,101.563)
C1': (48.178,129.734,102.423)
C5': (50.229,127.132,103.844)
O4': (48.751,129.009,103.503)
C8: (50.208,131.273,102.657)
O2': (46.837,128.181,101.191)
C6: (49.377,134.215,100.912)
C5: (49.566,132.982,101.566)
C4: (48.527,132.069,101.496)
P: (52.700,127.767,104.510)
C4': (49.044,127.656,103.072)
C2': (48.116,128.789,101.217)
C2: (47.293,133.434,100.295)
N1: (48.202,134.408,100.271)
N3: (47.352,132.240,100.869)
N6: (50.287,135.196,100.891)
N7: (50.621,132.468,102.306)
N9: (48.947,130.966,102.205)
O5': (51.365,127.998,103.672)
O3': (48.945,126.545,100.924)
OP1: (51.637,146.191,99.523)
OP2: (53.411,144.390,99.756)
C3': (49.419,142.893,99.544)
C1': (50.445,141.010,100.548)
C5': (51.605,142.774,98.206)
O4': (50.532,140.878,99.142)
C8: (52.944,141.269,100.903)
O2': (49.232,142.543,101.971)
C6: (53.858,138.763,103.175)
C5: (53.344,139.697,102.270)
C4: (51.998,139.616,101.983)
P: (52.477,145.152,98.911)
C4': (50.265,142.155,98.513)
C2': (50.084,142.466,100.847)
C2: (51.725,137.889,103.311)
N1: (53.006,137.847,103.685)
N3: (51.122,138.725,102.477)
N6: (55.135,138.740,103.563)
N7: (53.931,140.744,101.577)
N9: (51.742,140.646,101.111)
O5': (51.483,144.184,98.129)
O3': (48.084,142.391,99.508)
OP2: (53.411,144.390,99.756)
C3': (49.419,142.893,99.544)
C1': (50.445,141.010,100.548)
C5': (51.605,142.774,98.206)
O4': (50.532,140.878,99.142)
C8: (52.944,141.269,100.903)
O2': (49.232,142.543,101.971)
C6: (53.858,138.763,103.175)
C5: (53.344,139.697,102.270)
C4: (51.998,139.616,101.983)
P: (52.477,145.152,98.911)
C4': (50.265,142.155,98.513)
C2': (50.084,142.466,100.847)
C2: (51.725,137.889,103.311)
N1: (53.006,137.847,103.685)
N3: (51.122,138.725,102.477)
N6: (55.135,138.740,103.563)
N7: (53.931,140.744,101.577)
N9: (51.742,140.646,101.111)
O5': (51.483,144.184,98.129)
O3': (48.084,142.391,99.508)
Image (generated by PyMOL):