ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YI2:01937:01943

Extra

PDB:
ATOM 1 O3' C A1936 105.372 134.741 127.436 1.00 53.04 O
ATOM 2 P A A1937 104.426 135.427 128.537 1.00 54.19 P
ATOM 3 OP1 A A1937 105.090 136.690 128.954 1.00 55.92 O
ATOM 4 OP2 A A1937 104.038 134.428 129.564 1.00 52.72 O
ATOM 5 O5' A A1937 103.131 135.846 127.718 1.00 56.83 O
ATOM 6 C5' A A1937 103.197 136.860 126.692 1.00 56.00 C
ATOM 7 C4' A A1937 101.881 136.936 125.965 1.00 56.22 C
ATOM 8 O4' A A1937 101.686 135.725 125.186 1.00 56.96 O
ATOM 9 C3' A A1937 100.667 137.003 126.879 1.00 55.24 C
ATOM 10 O3' A A1937 100.411 138.338 127.290 1.00 53.40 O
ATOM 11 C2' A A1937 99.568 136.438 125.994 1.00 55.58 C
ATOM 12 O2' A A1937 99.111 137.393 125.060 1.00 54.53 O
ATOM 13 C1' A A1937 100.326 135.334 125.251 1.00 56.54 C
ATOM 14 N9 A A1937 100.268 134.028 125.907 1.00 58.36 N
ATOM 15 C8 A A1937 101.084 133.550 126.901 1.00 59.48 C
ATOM 16 N7 A A1937 100.800 132.327 127.277 1.00 60.52 N
ATOM 17 C5 A A1937 99.721 131.976 126.482 1.00 61.25 C
ATOM 18 C6 A A1937 98.958 130.798 126.388 1.00 61.84 C
ATOM 19 N6 A A1937 99.173 129.714 127.134 1.00 63.37 N
ATOM 20 N1 A A1937 97.954 130.771 125.488 1.00 60.79 N
ATOM 21 C2 A A1937 97.737 131.860 124.740 1.00 61.04 C
ATOM 22 N3 A A1937 98.383 133.024 124.734 1.00 59.97 N
ATOM 23 C4 A A1937 99.378 133.017 125.637 1.00 60.64 C
ATOM 24 P U A1938 99.737 138.622 128.721 1.00 55.06 P
ATOM 25 OP1 U A1938 99.674 140.098 128.871 1.00 53.63 O
ATOM 26 OP2 U A1938 100.414 137.796 129.760 1.00 54.12 O
ATOM 27 O5' U A1938 98.252 138.065 128.584 1.00 54.59 O
TER

ATOM 1 O3' U B1942 93.001 124.727 117.690 1.00 40.15 O
ATOM 2 P A B1943 94.415 125.306 117.210 1.00 41.45 P
ATOM 3 OP1 A B1943 94.794 124.622 115.943 1.00 42.11 O
ATOM 4 OP2 A B1943 95.337 125.268 118.364 1.00 42.90 O
ATOM 5 O5' A B1943 94.093 126.828 116.871 1.00 41.15 O
ATOM 6 C5' A B1943 93.096 127.161 115.895 1.00 38.54 C
ATOM 7 C4' A B1943 93.088 128.642 115.643 1.00 38.79 C
ATOM 8 O4' A B1943 92.699 129.350 116.849 1.00 39.21 O
ATOM 9 C3' A B1943 94.429 129.252 115.285 1.00 38.22 C
ATOM 10 O3' A B1943 94.739 129.062 113.918 1.00 36.79 O
ATOM 11 C2' A B1943 94.195 130.717 115.612 1.00 39.40 C
ATOM 12 O2' A B1943 93.426 131.357 114.620 1.00 40.92 O
ATOM 13 C1' A B1943 93.361 130.607 116.890 1.00 39.81 C
ATOM 14 N9 A B1943 94.174 130.666 118.106 1.00 41.20 N
ATOM 15 C8 A B1943 94.283 129.711 119.083 1.00 41.81 C
ATOM 16 N7 A B1943 95.072 130.050 120.068 1.00 42.89 N
ATOM 17 C5 A B1943 95.521 131.315 119.717 1.00 42.22 C
ATOM 18 C6 A B1943 96.395 132.216 120.351 1.00 42.65 C
ATOM 19 N6 A B1943 97.000 131.964 121.511 1.00 41.99 N
ATOM 20 N1 A B1943 96.636 133.395 119.739 1.00 41.25 N
ATOM 21 C2 A B1943 96.044 133.634 118.562 1.00 42.32 C
ATOM 22 N3 A B1943 95.211 132.865 117.865 1.00 41.83 N
ATOM 23 C4 A B1943 94.983 131.706 118.508 1.00 41.49 C
ATOM 24 P G B1944 96.247 128.747 113.483 1.00 37.38 P
ATOM 25 OP1 G B1944 96.324 128.741 112.003 1.00 37.12 O
ATOM 26 OP2 G B1944 96.700 127.561 114.244 1.00 37.64 O
ATOM 27 O5' G B1944 97.060 130.015 113.995 1.00 41.49 O
TER

Atoms:
OP1: (105.090,136.690,128.954)
OP2: (104.038,134.428,129.564)
C3': (100.667,137.003,126.879)
C1': (100.326,135.334,125.251)
C5': (103.197,136.860,126.692)
O4': (101.686,135.725,125.186)
C8: (101.084,133.550,126.901)
O2': (99.111,137.393,125.060)
C6: (98.958,130.798,126.388)
C5: (99.721,131.976,126.482)
C4: (99.378,133.017,125.637)
P: (104.426,135.427,128.537)
C4': (101.881,136.936,125.965)
C2': (99.568,136.438,125.994)
C2: (97.737,131.860,124.740)
N1: (97.954,130.771,125.488)
N3: (98.383,133.024,124.734)
N6: (99.173,129.714,127.134)
N7: (100.800,132.327,127.277)
N9: (100.268,134.028,125.907)
O5': (103.131,135.846,127.718)
O3': (100.411,138.338,127.290)
OP1: (94.794,124.622,115.943)
OP2: (95.337,125.268,118.364)
C3': (94.429,129.252,115.285)
C1': (93.361,130.607,116.890)
C5': (93.096,127.161,115.895)
O4': (92.699,129.350,116.849)
C8: (94.283,129.711,119.083)
O2': (93.426,131.357,114.620)
C6: (96.395,132.216,120.351)
C5: (95.521,131.315,119.717)
C4: (94.983,131.706,118.508)
P: (94.415,125.306,117.210)
C4': (93.088,128.642,115.643)
C2': (94.195,130.717,115.612)
C2: (96.044,133.634,118.562)
N1: (96.636,133.395,119.739)
N3: (95.211,132.865,117.865)
N6: (97.000,131.964,121.511)
N7: (95.072,130.050,120.068)
N9: (94.174,130.666,118.106)
O5': (94.093,126.828,116.871)
O3': (94.739,129.062,113.918)
Image (generated by PyMOL):
PyMOL image
show in jmol