ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YIJ:01937:01943

Extra

PDB:
ATOM 1 O3' C A1936 105.275 135.002 127.428 1.00 49.51 O
ATOM 2 P A A1937 104.305 135.701 128.496 1.00 51.01 P
ATOM 3 OP1 A A1937 104.942 136.982 128.910 1.00 51.53 O
ATOM 4 OP2 A A1937 103.896 134.716 129.525 1.00 49.91 O
ATOM 5 O5' A A1937 103.026 136.089 127.643 1.00 53.47 O
ATOM 6 C5' A A1937 103.092 137.117 126.640 1.00 52.11 C
ATOM 7 C4' A A1937 101.773 137.211 125.927 1.00 52.29 C
ATOM 8 O4' A A1937 101.565 136.013 125.132 1.00 53.01 O
ATOM 9 C3' A A1937 100.574 137.264 126.857 1.00 51.17 C
ATOM 10 O3' A A1937 100.345 138.593 127.303 1.00 49.39 O
ATOM 11 C2' A A1937 99.463 136.727 125.968 1.00 51.78 C
ATOM 12 O2' A A1937 99.032 137.704 125.042 1.00 50.45 O
ATOM 13 C1' A A1937 100.205 135.625 125.205 1.00 52.70 C
ATOM 14 N9 A A1937 100.153 134.311 125.847 1.00 54.66 N
ATOM 15 C8 A A1937 100.992 133.825 126.815 1.00 55.84 C
ATOM 16 N7 A A1937 100.720 132.598 127.186 1.00 56.62 N
ATOM 17 C5 A A1937 99.624 132.252 126.413 1.00 56.57 C
ATOM 18 C6 A A1937 98.862 131.073 126.328 1.00 56.44 C
ATOM 19 N6 A A1937 99.100 129.984 127.057 1.00 56.52 N
ATOM 20 N1 A A1937 97.834 131.053 125.457 1.00 55.64 N
ATOM 21 C2 A A1937 97.595 132.147 124.724 1.00 55.72 C
ATOM 22 N3 A A1937 98.239 133.311 124.710 1.00 55.92 N
ATOM 23 C4 A A1937 99.258 133.300 125.587 1.00 56.60 C
ATOM 24 P U A1938 99.659 138.855 128.733 1.00 50.29 P
ATOM 25 OP1 U A1938 99.599 140.329 128.919 1.00 48.72 O
ATOM 26 OP2 U A1938 100.327 138.005 129.751 1.00 50.61 O
ATOM 27 O5' U A1938 98.173 138.307 128.572 1.00 50.47 O
TER

ATOM 1 O3' U B1942 92.907 124.971 117.687 1.00 37.65 O
ATOM 2 P A B1943 94.339 125.516 117.218 1.00 39.10 P
ATOM 3 OP1 A B1943 94.709 124.775 115.983 1.00 39.41 O
ATOM 4 OP2 A B1943 95.248 125.492 118.383 1.00 39.81 O
ATOM 5 O5' A B1943 94.053 127.035 116.833 1.00 38.44 O
ATOM 6 C5' A B1943 93.051 127.365 115.859 1.00 35.99 C
ATOM 7 C4' A B1943 93.023 128.851 115.618 1.00 35.99 C
ATOM 8 O4' A B1943 92.613 129.545 116.826 1.00 36.39 O
ATOM 9 C3' A B1943 94.352 129.490 115.268 1.00 35.03 C
ATOM 10 O3' A B1943 94.670 129.324 113.899 1.00 34.34 O
ATOM 11 C2' A B1943 94.093 130.947 115.609 1.00 35.80 C
ATOM 12 O2' A B1943 93.332 131.592 114.616 1.00 36.81 O
ATOM 13 C1' A B1943 93.249 130.813 116.879 1.00 35.89 C
ATOM 14 N9 A B1943 94.056 130.880 118.099 1.00 36.98 N
ATOM 15 C8 A B1943 94.166 129.938 119.090 1.00 36.56 C
ATOM 16 N7 A B1943 94.976 130.283 120.058 1.00 38.19 N
ATOM 17 C5 A B1943 95.433 131.539 119.682 1.00 37.32 C
ATOM 18 C6 A B1943 96.333 132.439 120.283 1.00 37.51 C
ATOM 19 N6 A B1943 96.972 132.195 121.427 1.00 38.03 N
ATOM 20 N1 A B1943 96.568 133.608 119.652 1.00 35.93 N
ATOM 21 C2 A B1943 95.949 133.840 118.490 1.00 36.62 C
ATOM 22 N3 A B1943 95.094 133.072 117.821 1.00 35.98 N
ATOM 23 C4 A B1943 94.873 131.922 118.481 1.00 36.70 C
ATOM 24 P G B1944 96.180 129.012 113.469 1.00 34.45 P
ATOM 25 OP1 G B1944 96.262 128.977 111.992 1.00 35.66 O
ATOM 26 OP2 G B1944 96.620 127.836 114.249 1.00 37.45 O
ATOM 27 O5' G B1944 96.982 130.289 113.970 1.00 38.18 O
TER

Atoms:
OP1: (104.942,136.982,128.910)
OP2: (103.896,134.716,129.525)
C3': (100.574,137.264,126.857)
C1': (100.205,135.625,125.205)
C5': (103.092,137.117,126.640)
O4': (101.565,136.013,125.132)
C8: (100.992,133.825,126.815)
O2': (99.032,137.704,125.042)
C6: (98.862,131.073,126.328)
C5: (99.624,132.252,126.413)
C4: (99.258,133.300,125.587)
P: (104.305,135.701,128.496)
C4': (101.773,137.211,125.927)
C2': (99.463,136.727,125.968)
C2: (97.595,132.147,124.724)
N1: (97.834,131.053,125.457)
N3: (98.239,133.311,124.710)
N6: (99.100,129.984,127.057)
N7: (100.720,132.598,127.186)
N9: (100.153,134.311,125.847)
O5': (103.026,136.089,127.643)
O3': (100.345,138.593,127.303)
OP1: (94.709,124.775,115.983)
OP2: (95.248,125.492,118.383)
C3': (94.352,129.490,115.268)
C1': (93.249,130.813,116.879)
C5': (93.051,127.365,115.859)
O4': (92.613,129.545,116.826)
C8: (94.166,129.938,119.090)
O2': (93.332,131.592,114.616)
C6: (96.333,132.439,120.283)
C5: (95.433,131.539,119.682)
C4: (94.873,131.922,118.481)
P: (94.339,125.516,117.218)
C4': (93.023,128.851,115.618)
C2': (94.093,130.947,115.609)
C2: (95.949,133.840,118.490)
N1: (96.568,133.608,119.652)
N3: (95.094,133.072,117.821)
N6: (96.972,132.195,121.427)
N7: (94.976,130.283,120.058)
N9: (94.056,130.880,118.099)
O5': (94.053,127.035,116.833)
O3': (94.670,129.324,113.899)
Image (generated by PyMOL):
PyMOL image
show in jmol