Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIT:01937:01943
Extra
PDB:
ATOM 1 O3' C A1936 105.476 134.836 127.197 1.00 46.67 O
ATOM 2 P A A1937 104.517 135.484 128.309 1.00 47.37 P
ATOM 3 OP1 A A1937 105.166 136.732 128.785 1.00 49.66 O
ATOM 4 OP2 A A1937 104.115 134.443 129.283 1.00 47.69 O
ATOM 5 O5' A A1937 103.226 135.923 127.501 1.00 50.52 O
ATOM 6 C5' A A1937 103.293 136.945 126.491 1.00 49.86 C
ATOM 7 C4' A A1937 101.981 137.016 125.762 1.00 50.00 C
ATOM 8 O4' A A1937 101.799 135.808 124.978 1.00 50.70 O
ATOM 9 C3' A A1937 100.774 137.062 126.683 1.00 48.46 C
ATOM 10 O3' A A1937 100.515 138.393 127.104 1.00 45.62 O
ATOM 11 C2' A A1937 99.675 136.487 125.804 1.00 50.05 C
ATOM 12 O2' A A1937 99.187 137.442 124.886 1.00 49.11 O
ATOM 13 C1' A A1937 100.444 135.404 125.040 1.00 52.15 C
ATOM 14 N9 A A1937 100.401 134.080 125.659 1.00 54.80 N
ATOM 15 C8 A A1937 101.300 133.542 126.544 1.00 57.05 C
ATOM 16 N7 A A1937 101.021 132.312 126.903 1.00 58.44 N
ATOM 17 C5 A A1937 99.854 132.023 126.215 1.00 58.38 C
ATOM 18 C6 A A1937 99.052 130.871 126.162 1.00 59.21 C
ATOM 19 N6 A A1937 99.323 129.750 126.829 1.00 59.99 N
ATOM 20 N1 A A1937 97.951 130.908 125.384 1.00 59.10 N
ATOM 21 C2 A A1937 97.688 132.033 124.703 1.00 59.28 C
ATOM 22 N3 A A1937 98.370 133.178 124.665 1.00 57.34 N
ATOM 23 C4 A A1937 99.455 133.106 125.452 1.00 57.37 C
ATOM 24 P U A1938 99.831 138.663 128.532 1.00 45.16 P
ATOM 25 OP1 U A1938 99.747 140.135 128.710 1.00 44.26 O
ATOM 26 OP2 U A1938 100.519 137.835 129.556 1.00 45.99 O
ATOM 27 O5' U A1938 98.354 138.095 128.369 1.00 44.70 O
TER
ATOM 1 O3' U B1942 93.069 124.819 117.460 1.00 35.88 O
ATOM 2 P A B1943 94.533 125.349 117.110 1.00 37.36 P
ATOM 3 OP1 A B1943 95.027 124.605 115.919 1.00 37.94 O
ATOM 4 OP2 A B1943 95.310 125.317 118.366 1.00 38.37 O
ATOM 5 O5' A B1943 94.281 126.866 116.705 1.00 35.65 O
ATOM 6 C5' A B1943 93.271 127.208 115.753 1.00 33.34 C
ATOM 7 C4' A B1943 93.255 128.693 115.519 1.00 33.67 C
ATOM 8 O4' A B1943 92.860 129.388 116.729 1.00 34.34 O
ATOM 9 C3' A B1943 94.584 129.323 115.160 1.00 32.49 C
ATOM 10 O3' A B1943 94.883 129.143 113.788 1.00 33.14 O
ATOM 11 C2' A B1943 94.325 130.782 115.490 1.00 34.60 C
ATOM 12 O2' A B1943 93.544 131.409 114.497 1.00 38.70 O
ATOM 13 C1' A B1943 93.489 130.658 116.767 1.00 34.21 C
ATOM 14 N9 A B1943 94.291 130.746 117.988 1.00 34.51 N
ATOM 15 C8 A B1943 94.384 129.827 119.001 1.00 34.83 C
ATOM 16 N7 A B1943 95.190 130.186 119.966 1.00 35.42 N
ATOM 17 C5 A B1943 95.663 131.427 119.563 1.00 34.47 C
ATOM 18 C6 A B1943 96.564 132.334 120.150 1.00 34.42 C
ATOM 19 N6 A B1943 97.190 132.115 121.306 1.00 35.57 N
ATOM 20 N1 A B1943 96.811 133.484 119.493 1.00 32.03 N
ATOM 21 C2 A B1943 96.205 133.693 118.323 1.00 31.75 C
ATOM 22 N3 A B1943 95.353 132.918 117.666 1.00 32.50 N
ATOM 23 C4 A B1943 95.116 131.786 118.349 1.00 33.90 C
ATOM 24 P G B1944 96.384 128.802 113.340 1.00 34.01 P
ATOM 25 OP1 G B1944 96.437 128.780 111.856 1.00 34.43 O
ATOM 26 OP2 G B1944 96.823 127.610 114.099 1.00 34.39 O
ATOM 27 O5' G B1944 97.215 130.072 113.829 1.00 37.34 O
TER
ATOM 2 P A A1937 104.517 135.484 128.309 1.00 47.37 P
ATOM 3 OP1 A A1937 105.166 136.732 128.785 1.00 49.66 O
ATOM 4 OP2 A A1937 104.115 134.443 129.283 1.00 47.69 O
ATOM 5 O5' A A1937 103.226 135.923 127.501 1.00 50.52 O
ATOM 6 C5' A A1937 103.293 136.945 126.491 1.00 49.86 C
ATOM 7 C4' A A1937 101.981 137.016 125.762 1.00 50.00 C
ATOM 8 O4' A A1937 101.799 135.808 124.978 1.00 50.70 O
ATOM 9 C3' A A1937 100.774 137.062 126.683 1.00 48.46 C
ATOM 10 O3' A A1937 100.515 138.393 127.104 1.00 45.62 O
ATOM 11 C2' A A1937 99.675 136.487 125.804 1.00 50.05 C
ATOM 12 O2' A A1937 99.187 137.442 124.886 1.00 49.11 O
ATOM 13 C1' A A1937 100.444 135.404 125.040 1.00 52.15 C
ATOM 14 N9 A A1937 100.401 134.080 125.659 1.00 54.80 N
ATOM 15 C8 A A1937 101.300 133.542 126.544 1.00 57.05 C
ATOM 16 N7 A A1937 101.021 132.312 126.903 1.00 58.44 N
ATOM 17 C5 A A1937 99.854 132.023 126.215 1.00 58.38 C
ATOM 18 C6 A A1937 99.052 130.871 126.162 1.00 59.21 C
ATOM 19 N6 A A1937 99.323 129.750 126.829 1.00 59.99 N
ATOM 20 N1 A A1937 97.951 130.908 125.384 1.00 59.10 N
ATOM 21 C2 A A1937 97.688 132.033 124.703 1.00 59.28 C
ATOM 22 N3 A A1937 98.370 133.178 124.665 1.00 57.34 N
ATOM 23 C4 A A1937 99.455 133.106 125.452 1.00 57.37 C
ATOM 24 P U A1938 99.831 138.663 128.532 1.00 45.16 P
ATOM 25 OP1 U A1938 99.747 140.135 128.710 1.00 44.26 O
ATOM 26 OP2 U A1938 100.519 137.835 129.556 1.00 45.99 O
ATOM 27 O5' U A1938 98.354 138.095 128.369 1.00 44.70 O
TER
ATOM 1 O3' U B1942 93.069 124.819 117.460 1.00 35.88 O
ATOM 2 P A B1943 94.533 125.349 117.110 1.00 37.36 P
ATOM 3 OP1 A B1943 95.027 124.605 115.919 1.00 37.94 O
ATOM 4 OP2 A B1943 95.310 125.317 118.366 1.00 38.37 O
ATOM 5 O5' A B1943 94.281 126.866 116.705 1.00 35.65 O
ATOM 6 C5' A B1943 93.271 127.208 115.753 1.00 33.34 C
ATOM 7 C4' A B1943 93.255 128.693 115.519 1.00 33.67 C
ATOM 8 O4' A B1943 92.860 129.388 116.729 1.00 34.34 O
ATOM 9 C3' A B1943 94.584 129.323 115.160 1.00 32.49 C
ATOM 10 O3' A B1943 94.883 129.143 113.788 1.00 33.14 O
ATOM 11 C2' A B1943 94.325 130.782 115.490 1.00 34.60 C
ATOM 12 O2' A B1943 93.544 131.409 114.497 1.00 38.70 O
ATOM 13 C1' A B1943 93.489 130.658 116.767 1.00 34.21 C
ATOM 14 N9 A B1943 94.291 130.746 117.988 1.00 34.51 N
ATOM 15 C8 A B1943 94.384 129.827 119.001 1.00 34.83 C
ATOM 16 N7 A B1943 95.190 130.186 119.966 1.00 35.42 N
ATOM 17 C5 A B1943 95.663 131.427 119.563 1.00 34.47 C
ATOM 18 C6 A B1943 96.564 132.334 120.150 1.00 34.42 C
ATOM 19 N6 A B1943 97.190 132.115 121.306 1.00 35.57 N
ATOM 20 N1 A B1943 96.811 133.484 119.493 1.00 32.03 N
ATOM 21 C2 A B1943 96.205 133.693 118.323 1.00 31.75 C
ATOM 22 N3 A B1943 95.353 132.918 117.666 1.00 32.50 N
ATOM 23 C4 A B1943 95.116 131.786 118.349 1.00 33.90 C
ATOM 24 P G B1944 96.384 128.802 113.340 1.00 34.01 P
ATOM 25 OP1 G B1944 96.437 128.780 111.856 1.00 34.43 O
ATOM 26 OP2 G B1944 96.823 127.610 114.099 1.00 34.39 O
ATOM 27 O5' G B1944 97.215 130.072 113.829 1.00 37.34 O
TER
Atoms:
OP1: (105.166,136.732,128.785)
OP2: (104.115,134.443,129.283)
C3': (100.774,137.062,126.683)
C1': (100.444,135.404,125.040)
C5': (103.293,136.945,126.491)
O4': (101.799,135.808,124.978)
C8: (101.300,133.542,126.544)
O2': (99.187,137.442,124.886)
C6: (99.052,130.871,126.162)
C5: (99.854,132.023,126.215)
C4: (99.455,133.106,125.452)
P: (104.517,135.484,128.309)
C4': (101.981,137.016,125.762)
C2': (99.675,136.487,125.804)
C2: (97.688,132.033,124.703)
N1: (97.951,130.908,125.384)
N3: (98.370,133.178,124.665)
N6: (99.323,129.750,126.829)
N7: (101.021,132.312,126.903)
N9: (100.401,134.080,125.659)
O5': (103.226,135.923,127.501)
O3': (100.515,138.393,127.104)
OP2: (104.115,134.443,129.283)
C3': (100.774,137.062,126.683)
C1': (100.444,135.404,125.040)
C5': (103.293,136.945,126.491)
O4': (101.799,135.808,124.978)
C8: (101.300,133.542,126.544)
O2': (99.187,137.442,124.886)
C6: (99.052,130.871,126.162)
C5: (99.854,132.023,126.215)
C4: (99.455,133.106,125.452)
P: (104.517,135.484,128.309)
C4': (101.981,137.016,125.762)
C2': (99.675,136.487,125.804)
C2: (97.688,132.033,124.703)
N1: (97.951,130.908,125.384)
N3: (98.370,133.178,124.665)
N6: (99.323,129.750,126.829)
N7: (101.021,132.312,126.903)
N9: (100.401,134.080,125.659)
O5': (103.226,135.923,127.501)
O3': (100.515,138.393,127.104)
OP1: (95.027,124.605,115.919)
OP2: (95.310,125.317,118.366)
C3': (94.584,129.323,115.160)
C1': (93.489,130.658,116.767)
C5': (93.271,127.208,115.753)
O4': (92.860,129.388,116.729)
C8: (94.384,129.827,119.001)
O2': (93.544,131.409,114.497)
C6: (96.564,132.334,120.150)
C5: (95.663,131.427,119.563)
C4: (95.116,131.786,118.349)
P: (94.533,125.349,117.110)
C4': (93.255,128.693,115.519)
C2': (94.325,130.782,115.490)
C2: (96.205,133.693,118.323)
N1: (96.811,133.484,119.493)
N3: (95.353,132.918,117.666)
N6: (97.190,132.115,121.306)
N7: (95.190,130.186,119.966)
N9: (94.291,130.746,117.988)
O5': (94.281,126.866,116.705)
O3': (94.883,129.143,113.788)
OP2: (95.310,125.317,118.366)
C3': (94.584,129.323,115.160)
C1': (93.489,130.658,116.767)
C5': (93.271,127.208,115.753)
O4': (92.860,129.388,116.729)
C8: (94.384,129.827,119.001)
O2': (93.544,131.409,114.497)
C6: (96.564,132.334,120.150)
C5: (95.663,131.427,119.563)
C4: (95.116,131.786,118.349)
P: (94.533,125.349,117.110)
C4': (93.255,128.693,115.519)
C2': (94.325,130.782,115.490)
C2: (96.205,133.693,118.323)
N1: (96.811,133.484,119.493)
N3: (95.353,132.918,117.666)
N6: (97.190,132.115,121.306)
N7: (95.190,130.186,119.966)
N9: (94.291,130.746,117.988)
O5': (94.281,126.866,116.705)
O3': (94.883,129.143,113.788)
Image (generated by PyMOL):