Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIT:02041:02490
Extra
PDB:
ATOM 1 O3' G A2040 52.317 127.779 105.932 1.00 32.51 O
ATOM 2 P A A2041 52.818 127.655 104.406 1.00 32.40 P
ATOM 3 OP1 A A2041 53.197 126.246 104.170 1.00 31.69 O
ATOM 4 OP2 A A2041 53.811 128.725 104.154 1.00 34.14 O
ATOM 5 O5' A A2041 51.512 127.960 103.552 1.00 29.83 O
ATOM 6 C5' A A2041 50.354 127.127 103.680 1.00 28.83 C
ATOM 7 C4' A A2041 49.194 127.703 102.910 1.00 30.16 C
ATOM 8 O4' A A2041 48.967 129.067 103.338 1.00 31.76 O
ATOM 9 C3' A A2041 49.344 127.831 101.402 1.00 30.79 C
ATOM 10 O3' A A2041 49.053 126.601 100.756 1.00 32.45 O
ATOM 11 C2' A A2041 48.270 128.855 101.072 1.00 30.97 C
ATOM 12 O2' A A2041 46.978 128.272 101.073 1.00 30.11 O
ATOM 13 C1' A A2041 48.372 129.798 102.275 1.00 32.34 C
ATOM 14 N9 A A2041 49.146 131.021 102.036 1.00 32.08 N
ATOM 15 C8 A A2041 50.436 131.299 102.414 1.00 33.23 C
ATOM 16 N7 A A2041 50.846 132.494 102.061 1.00 32.98 N
ATOM 17 C5 A A2041 49.755 133.038 101.405 1.00 32.00 C
ATOM 18 C6 A A2041 49.553 134.277 100.790 1.00 32.30 C
ATOM 19 N6 A A2041 50.482 135.235 100.738 1.00 31.85 N
ATOM 20 N1 A A2041 48.348 134.506 100.221 1.00 31.80 N
ATOM 21 C2 A A2041 47.420 133.544 100.275 1.00 29.47 C
ATOM 22 N3 A A2041 47.492 132.340 100.825 1.00 30.34 N
ATOM 23 C4 A A2041 48.701 132.143 101.380 1.00 31.95 C
ATOM 24 P A A2042 49.835 126.192 99.418 1.00 33.23 P
ATOM 25 OP1 A A2042 49.948 127.391 98.549 1.00 35.15 O
ATOM 26 OP2 A A2042 49.163 124.983 98.902 1.00 34.21 O
ATOM 27 O5' A A2042 51.289 125.784 99.929 1.00 29.87 O
TER
ATOM 1 O3' U B2489 53.548 145.727 97.577 1.00 29.95 O
ATOM 2 P A B2490 52.705 145.033 98.747 1.00 32.87 P
ATOM 3 OP1 A B2490 51.885 146.090 99.368 1.00 34.52 O
ATOM 4 OP2 A B2490 53.616 144.232 99.590 1.00 35.52 O
ATOM 5 O5' A B2490 51.687 144.093 97.965 1.00 33.86 O
ATOM 6 C5' A B2490 51.773 142.686 98.054 1.00 32.44 C
ATOM 7 C4' A B2490 50.418 142.103 98.349 1.00 34.85 C
ATOM 8 O4' A B2490 50.661 140.821 98.973 1.00 37.44 O
ATOM 9 C3' A B2490 49.594 142.855 99.387 1.00 35.99 C
ATOM 10 O3' A B2490 48.248 142.382 99.365 1.00 36.15 O
ATOM 11 C2' A B2490 50.264 142.416 100.684 1.00 36.99 C
ATOM 12 O2' A B2490 49.419 142.482 101.810 1.00 37.86 O
ATOM 13 C1' A B2490 50.616 140.960 100.380 1.00 36.92 C
ATOM 14 N9 A B2490 51.925 140.590 100.912 1.00 37.28 N
ATOM 15 C8 A B2490 53.139 141.167 100.648 1.00 36.19 C
ATOM 16 N7 A B2490 54.133 140.629 101.307 1.00 38.77 N
ATOM 17 C5 A B2490 53.534 139.626 102.052 1.00 39.44 C
ATOM 18 C6 A B2490 54.047 138.693 102.966 1.00 41.40 C
ATOM 19 N6 A B2490 55.336 138.629 103.316 1.00 43.36 N
ATOM 20 N1 A B2490 53.180 137.820 103.523 1.00 41.05 N
ATOM 21 C2 A B2490 51.887 137.896 103.187 1.00 40.13 C
ATOM 22 N3 A B2490 51.285 138.733 102.353 1.00 40.00 N
ATOM 23 C4 A B2490 52.176 139.583 101.810 1.00 39.19 C
ATOM 24 P U B2491 47.091 143.211 98.614 1.00 36.19 P
ATOM 25 OP1 U B2491 47.679 144.061 97.545 1.00 34.59 O
ATOM 26 OP2 U B2491 46.230 143.824 99.651 1.00 33.41 O
ATOM 27 O5' U B2491 46.260 142.035 97.937 1.00 34.80 O
TER
ATOM 2 P A A2041 52.818 127.655 104.406 1.00 32.40 P
ATOM 3 OP1 A A2041 53.197 126.246 104.170 1.00 31.69 O
ATOM 4 OP2 A A2041 53.811 128.725 104.154 1.00 34.14 O
ATOM 5 O5' A A2041 51.512 127.960 103.552 1.00 29.83 O
ATOM 6 C5' A A2041 50.354 127.127 103.680 1.00 28.83 C
ATOM 7 C4' A A2041 49.194 127.703 102.910 1.00 30.16 C
ATOM 8 O4' A A2041 48.967 129.067 103.338 1.00 31.76 O
ATOM 9 C3' A A2041 49.344 127.831 101.402 1.00 30.79 C
ATOM 10 O3' A A2041 49.053 126.601 100.756 1.00 32.45 O
ATOM 11 C2' A A2041 48.270 128.855 101.072 1.00 30.97 C
ATOM 12 O2' A A2041 46.978 128.272 101.073 1.00 30.11 O
ATOM 13 C1' A A2041 48.372 129.798 102.275 1.00 32.34 C
ATOM 14 N9 A A2041 49.146 131.021 102.036 1.00 32.08 N
ATOM 15 C8 A A2041 50.436 131.299 102.414 1.00 33.23 C
ATOM 16 N7 A A2041 50.846 132.494 102.061 1.00 32.98 N
ATOM 17 C5 A A2041 49.755 133.038 101.405 1.00 32.00 C
ATOM 18 C6 A A2041 49.553 134.277 100.790 1.00 32.30 C
ATOM 19 N6 A A2041 50.482 135.235 100.738 1.00 31.85 N
ATOM 20 N1 A A2041 48.348 134.506 100.221 1.00 31.80 N
ATOM 21 C2 A A2041 47.420 133.544 100.275 1.00 29.47 C
ATOM 22 N3 A A2041 47.492 132.340 100.825 1.00 30.34 N
ATOM 23 C4 A A2041 48.701 132.143 101.380 1.00 31.95 C
ATOM 24 P A A2042 49.835 126.192 99.418 1.00 33.23 P
ATOM 25 OP1 A A2042 49.948 127.391 98.549 1.00 35.15 O
ATOM 26 OP2 A A2042 49.163 124.983 98.902 1.00 34.21 O
ATOM 27 O5' A A2042 51.289 125.784 99.929 1.00 29.87 O
TER
ATOM 1 O3' U B2489 53.548 145.727 97.577 1.00 29.95 O
ATOM 2 P A B2490 52.705 145.033 98.747 1.00 32.87 P
ATOM 3 OP1 A B2490 51.885 146.090 99.368 1.00 34.52 O
ATOM 4 OP2 A B2490 53.616 144.232 99.590 1.00 35.52 O
ATOM 5 O5' A B2490 51.687 144.093 97.965 1.00 33.86 O
ATOM 6 C5' A B2490 51.773 142.686 98.054 1.00 32.44 C
ATOM 7 C4' A B2490 50.418 142.103 98.349 1.00 34.85 C
ATOM 8 O4' A B2490 50.661 140.821 98.973 1.00 37.44 O
ATOM 9 C3' A B2490 49.594 142.855 99.387 1.00 35.99 C
ATOM 10 O3' A B2490 48.248 142.382 99.365 1.00 36.15 O
ATOM 11 C2' A B2490 50.264 142.416 100.684 1.00 36.99 C
ATOM 12 O2' A B2490 49.419 142.482 101.810 1.00 37.86 O
ATOM 13 C1' A B2490 50.616 140.960 100.380 1.00 36.92 C
ATOM 14 N9 A B2490 51.925 140.590 100.912 1.00 37.28 N
ATOM 15 C8 A B2490 53.139 141.167 100.648 1.00 36.19 C
ATOM 16 N7 A B2490 54.133 140.629 101.307 1.00 38.77 N
ATOM 17 C5 A B2490 53.534 139.626 102.052 1.00 39.44 C
ATOM 18 C6 A B2490 54.047 138.693 102.966 1.00 41.40 C
ATOM 19 N6 A B2490 55.336 138.629 103.316 1.00 43.36 N
ATOM 20 N1 A B2490 53.180 137.820 103.523 1.00 41.05 N
ATOM 21 C2 A B2490 51.887 137.896 103.187 1.00 40.13 C
ATOM 22 N3 A B2490 51.285 138.733 102.353 1.00 40.00 N
ATOM 23 C4 A B2490 52.176 139.583 101.810 1.00 39.19 C
ATOM 24 P U B2491 47.091 143.211 98.614 1.00 36.19 P
ATOM 25 OP1 U B2491 47.679 144.061 97.545 1.00 34.59 O
ATOM 26 OP2 U B2491 46.230 143.824 99.651 1.00 33.41 O
ATOM 27 O5' U B2491 46.260 142.035 97.937 1.00 34.80 O
TER
Atoms:
OP1: (53.197,126.246,104.170)
OP2: (53.811,128.725,104.154)
C3': (49.344,127.831,101.402)
C1': (48.372,129.798,102.275)
C5': (50.354,127.127,103.680)
O4': (48.967,129.067,103.338)
C8: (50.436,131.299,102.414)
O2': (46.978,128.272,101.073)
C6: (49.553,134.277,100.790)
C5: (49.755,133.038,101.405)
C4: (48.701,132.143,101.380)
P: (52.818,127.655,104.406)
C4': (49.194,127.703,102.910)
C2': (48.270,128.855,101.072)
C2: (47.420,133.544,100.275)
N1: (48.348,134.506,100.221)
N3: (47.492,132.340,100.825)
N6: (50.482,135.235,100.738)
N7: (50.846,132.494,102.061)
N9: (49.146,131.021,102.036)
O5': (51.512,127.960,103.552)
O3': (49.053,126.601,100.756)
OP2: (53.811,128.725,104.154)
C3': (49.344,127.831,101.402)
C1': (48.372,129.798,102.275)
C5': (50.354,127.127,103.680)
O4': (48.967,129.067,103.338)
C8: (50.436,131.299,102.414)
O2': (46.978,128.272,101.073)
C6: (49.553,134.277,100.790)
C5: (49.755,133.038,101.405)
C4: (48.701,132.143,101.380)
P: (52.818,127.655,104.406)
C4': (49.194,127.703,102.910)
C2': (48.270,128.855,101.072)
C2: (47.420,133.544,100.275)
N1: (48.348,134.506,100.221)
N3: (47.492,132.340,100.825)
N6: (50.482,135.235,100.738)
N7: (50.846,132.494,102.061)
N9: (49.146,131.021,102.036)
O5': (51.512,127.960,103.552)
O3': (49.053,126.601,100.756)
OP1: (51.885,146.090,99.368)
OP2: (53.616,144.232,99.590)
C3': (49.594,142.855,99.387)
C1': (50.616,140.960,100.380)
C5': (51.773,142.686,98.054)
O4': (50.661,140.821,98.973)
C8: (53.139,141.167,100.648)
O2': (49.419,142.482,101.810)
C6: (54.047,138.693,102.966)
C5: (53.534,139.626,102.052)
C4: (52.176,139.583,101.810)
P: (52.705,145.033,98.747)
C4': (50.418,142.103,98.349)
C2': (50.264,142.416,100.684)
C2: (51.887,137.896,103.187)
N1: (53.180,137.820,103.523)
N3: (51.285,138.733,102.353)
N6: (55.336,138.629,103.316)
N7: (54.133,140.629,101.307)
N9: (51.925,140.590,100.912)
O5': (51.687,144.093,97.965)
O3': (48.248,142.382,99.365)
OP2: (53.616,144.232,99.590)
C3': (49.594,142.855,99.387)
C1': (50.616,140.960,100.380)
C5': (51.773,142.686,98.054)
O4': (50.661,140.821,98.973)
C8: (53.139,141.167,100.648)
O2': (49.419,142.482,101.810)
C6: (54.047,138.693,102.966)
C5: (53.534,139.626,102.052)
C4: (52.176,139.583,101.810)
P: (52.705,145.033,98.747)
C4': (50.418,142.103,98.349)
C2': (50.264,142.416,100.684)
C2: (51.887,137.896,103.187)
N1: (53.180,137.820,103.523)
N3: (51.285,138.733,102.353)
N6: (55.336,138.629,103.316)
N7: (54.133,140.629,101.307)
N9: (51.925,140.590,100.912)
O5': (51.687,144.093,97.965)
O3': (48.248,142.382,99.365)
Image (generated by PyMOL):