Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:01937:01943
Extra
PDB:
ATOM 1 O3' C A1936 105.522 135.101 127.896 1.00 60.34 O
ATOM 2 P A A1937 104.500 135.780 128.928 1.00 58.49 P
ATOM 3 OP1 A A1937 105.117 137.039 129.407 1.00 59.57 O
ATOM 4 OP2 A A1937 104.057 134.763 129.906 1.00 58.39 O
ATOM 5 O5' A A1937 103.259 136.178 128.021 1.00 61.71 O
ATOM 6 C5' A A1937 103.369 137.183 126.985 1.00 62.05 C
ATOM 7 C4' A A1937 102.051 137.316 126.264 1.00 62.15 C
ATOM 8 O4' A A1937 101.810 136.122 125.474 1.00 63.23 O
ATOM 9 C3' A A1937 100.861 137.399 127.205 1.00 61.27 C
ATOM 10 O3' A A1937 100.628 138.722 127.642 1.00 58.35 O
ATOM 11 C2' A A1937 99.723 136.838 126.371 1.00 62.70 C
ATOM 12 O2' A A1937 99.179 137.788 125.478 1.00 62.05 O
ATOM 13 C1' A A1937 100.449 135.737 125.594 1.00 64.76 C
ATOM 14 N9 A A1937 100.411 134.432 126.253 1.00 66.89 N
ATOM 15 C8 A A1937 101.269 133.947 127.202 1.00 68.05 C
ATOM 16 N7 A A1937 101.004 132.723 127.580 1.00 69.93 N
ATOM 17 C5 A A1937 99.890 132.379 126.833 1.00 71.00 C
ATOM 18 C6 A A1937 99.126 131.200 126.760 1.00 72.87 C
ATOM 19 N6 A A1937 99.386 130.098 127.467 1.00 74.41 N
ATOM 20 N1 A A1937 98.073 131.189 125.919 1.00 73.15 N
ATOM 21 C2 A A1937 97.819 132.289 125.200 1.00 72.37 C
ATOM 22 N3 A A1937 98.467 133.449 125.174 1.00 70.52 N
ATOM 23 C4 A A1937 99.505 133.428 126.023 1.00 69.61 C
ATOM 24 P U A1938 99.904 138.969 129.046 1.00 58.96 P
ATOM 25 OP1 U A1938 99.787 140.437 129.250 1.00 57.14 O
ATOM 26 OP2 U A1938 100.586 138.129 130.065 1.00 59.71 O
ATOM 27 O5' U A1938 98.445 138.369 128.839 1.00 59.92 O
TER
ATOM 1 O3' U B1942 93.109 125.178 118.020 1.00 42.91 O
ATOM 2 P A B1943 94.572 125.687 117.635 1.00 43.74 P
ATOM 3 OP1 A B1943 95.029 124.921 116.441 1.00 42.78 O
ATOM 4 OP2 A B1943 95.389 125.682 118.869 1.00 44.12 O
ATOM 5 O5' A B1943 94.318 127.196 117.212 1.00 41.85 O
ATOM 6 C5' A B1943 93.398 127.506 116.173 1.00 39.91 C
ATOM 7 C4' A B1943 93.366 128.983 115.942 1.00 40.35 C
ATOM 8 O4' A B1943 92.978 129.644 117.172 1.00 40.83 O
ATOM 9 C3' A B1943 94.692 129.634 115.599 1.00 40.12 C
ATOM 10 O3' A B1943 95.009 129.481 114.228 1.00 40.81 O
ATOM 11 C2' A B1943 94.409 131.084 115.945 1.00 40.88 C
ATOM 12 O2' A B1943 93.596 131.695 114.965 1.00 43.30 O
ATOM 13 C1' A B1943 93.584 130.925 117.224 1.00 40.62 C
ATOM 14 N9 A B1943 94.380 131.016 118.449 1.00 40.53 N
ATOM 15 C8 A B1943 94.446 130.113 119.483 1.00 40.34 C
ATOM 16 N7 A B1943 95.227 130.488 120.462 1.00 40.96 N
ATOM 17 C5 A B1943 95.721 131.719 120.045 1.00 41.05 C
ATOM 18 C6 A B1943 96.616 132.634 120.636 1.00 41.29 C
ATOM 19 N6 A B1943 97.206 132.441 121.817 1.00 40.87 N
ATOM 20 N1 A B1943 96.895 133.764 119.955 1.00 40.66 N
ATOM 21 C2 A B1943 96.318 133.950 118.758 1.00 40.90 C
ATOM 22 N3 A B1943 95.474 133.167 118.098 1.00 39.08 N
ATOM 23 C4 A B1943 95.210 132.054 118.805 1.00 40.05 C
ATOM 24 P G B1944 96.519 129.156 113.795 1.00 42.51 P
ATOM 25 OP1 G B1944 96.562 129.196 112.312 1.00 42.53 O
ATOM 26 OP2 G B1944 96.955 127.932 114.503 1.00 41.58 O
ATOM 27 O5' G B1944 97.349 130.398 114.352 1.00 45.17 O
TER
ATOM 2 P A A1937 104.500 135.780 128.928 1.00 58.49 P
ATOM 3 OP1 A A1937 105.117 137.039 129.407 1.00 59.57 O
ATOM 4 OP2 A A1937 104.057 134.763 129.906 1.00 58.39 O
ATOM 5 O5' A A1937 103.259 136.178 128.021 1.00 61.71 O
ATOM 6 C5' A A1937 103.369 137.183 126.985 1.00 62.05 C
ATOM 7 C4' A A1937 102.051 137.316 126.264 1.00 62.15 C
ATOM 8 O4' A A1937 101.810 136.122 125.474 1.00 63.23 O
ATOM 9 C3' A A1937 100.861 137.399 127.205 1.00 61.27 C
ATOM 10 O3' A A1937 100.628 138.722 127.642 1.00 58.35 O
ATOM 11 C2' A A1937 99.723 136.838 126.371 1.00 62.70 C
ATOM 12 O2' A A1937 99.179 137.788 125.478 1.00 62.05 O
ATOM 13 C1' A A1937 100.449 135.737 125.594 1.00 64.76 C
ATOM 14 N9 A A1937 100.411 134.432 126.253 1.00 66.89 N
ATOM 15 C8 A A1937 101.269 133.947 127.202 1.00 68.05 C
ATOM 16 N7 A A1937 101.004 132.723 127.580 1.00 69.93 N
ATOM 17 C5 A A1937 99.890 132.379 126.833 1.00 71.00 C
ATOM 18 C6 A A1937 99.126 131.200 126.760 1.00 72.87 C
ATOM 19 N6 A A1937 99.386 130.098 127.467 1.00 74.41 N
ATOM 20 N1 A A1937 98.073 131.189 125.919 1.00 73.15 N
ATOM 21 C2 A A1937 97.819 132.289 125.200 1.00 72.37 C
ATOM 22 N3 A A1937 98.467 133.449 125.174 1.00 70.52 N
ATOM 23 C4 A A1937 99.505 133.428 126.023 1.00 69.61 C
ATOM 24 P U A1938 99.904 138.969 129.046 1.00 58.96 P
ATOM 25 OP1 U A1938 99.787 140.437 129.250 1.00 57.14 O
ATOM 26 OP2 U A1938 100.586 138.129 130.065 1.00 59.71 O
ATOM 27 O5' U A1938 98.445 138.369 128.839 1.00 59.92 O
TER
ATOM 1 O3' U B1942 93.109 125.178 118.020 1.00 42.91 O
ATOM 2 P A B1943 94.572 125.687 117.635 1.00 43.74 P
ATOM 3 OP1 A B1943 95.029 124.921 116.441 1.00 42.78 O
ATOM 4 OP2 A B1943 95.389 125.682 118.869 1.00 44.12 O
ATOM 5 O5' A B1943 94.318 127.196 117.212 1.00 41.85 O
ATOM 6 C5' A B1943 93.398 127.506 116.173 1.00 39.91 C
ATOM 7 C4' A B1943 93.366 128.983 115.942 1.00 40.35 C
ATOM 8 O4' A B1943 92.978 129.644 117.172 1.00 40.83 O
ATOM 9 C3' A B1943 94.692 129.634 115.599 1.00 40.12 C
ATOM 10 O3' A B1943 95.009 129.481 114.228 1.00 40.81 O
ATOM 11 C2' A B1943 94.409 131.084 115.945 1.00 40.88 C
ATOM 12 O2' A B1943 93.596 131.695 114.965 1.00 43.30 O
ATOM 13 C1' A B1943 93.584 130.925 117.224 1.00 40.62 C
ATOM 14 N9 A B1943 94.380 131.016 118.449 1.00 40.53 N
ATOM 15 C8 A B1943 94.446 130.113 119.483 1.00 40.34 C
ATOM 16 N7 A B1943 95.227 130.488 120.462 1.00 40.96 N
ATOM 17 C5 A B1943 95.721 131.719 120.045 1.00 41.05 C
ATOM 18 C6 A B1943 96.616 132.634 120.636 1.00 41.29 C
ATOM 19 N6 A B1943 97.206 132.441 121.817 1.00 40.87 N
ATOM 20 N1 A B1943 96.895 133.764 119.955 1.00 40.66 N
ATOM 21 C2 A B1943 96.318 133.950 118.758 1.00 40.90 C
ATOM 22 N3 A B1943 95.474 133.167 118.098 1.00 39.08 N
ATOM 23 C4 A B1943 95.210 132.054 118.805 1.00 40.05 C
ATOM 24 P G B1944 96.519 129.156 113.795 1.00 42.51 P
ATOM 25 OP1 G B1944 96.562 129.196 112.312 1.00 42.53 O
ATOM 26 OP2 G B1944 96.955 127.932 114.503 1.00 41.58 O
ATOM 27 O5' G B1944 97.349 130.398 114.352 1.00 45.17 O
TER
Atoms:
OP1: (105.117,137.039,129.407)
OP2: (104.057,134.763,129.906)
C3': (100.861,137.399,127.205)
C1': (100.449,135.737,125.594)
C5': (103.369,137.183,126.985)
O4': (101.810,136.122,125.474)
C8: (101.269,133.947,127.202)
O2': (99.179,137.788,125.478)
C6: (99.126,131.200,126.760)
C5: (99.890,132.379,126.833)
C4: (99.505,133.428,126.023)
P: (104.500,135.780,128.928)
C4': (102.051,137.316,126.264)
C2': (99.723,136.838,126.371)
C2: (97.819,132.289,125.200)
N1: (98.073,131.189,125.919)
N3: (98.467,133.449,125.174)
N6: (99.386,130.098,127.467)
N7: (101.004,132.723,127.580)
N9: (100.411,134.432,126.253)
O5': (103.259,136.178,128.021)
O3': (100.628,138.722,127.642)
OP2: (104.057,134.763,129.906)
C3': (100.861,137.399,127.205)
C1': (100.449,135.737,125.594)
C5': (103.369,137.183,126.985)
O4': (101.810,136.122,125.474)
C8: (101.269,133.947,127.202)
O2': (99.179,137.788,125.478)
C6: (99.126,131.200,126.760)
C5: (99.890,132.379,126.833)
C4: (99.505,133.428,126.023)
P: (104.500,135.780,128.928)
C4': (102.051,137.316,126.264)
C2': (99.723,136.838,126.371)
C2: (97.819,132.289,125.200)
N1: (98.073,131.189,125.919)
N3: (98.467,133.449,125.174)
N6: (99.386,130.098,127.467)
N7: (101.004,132.723,127.580)
N9: (100.411,134.432,126.253)
O5': (103.259,136.178,128.021)
O3': (100.628,138.722,127.642)
OP1: (95.029,124.921,116.441)
OP2: (95.389,125.682,118.869)
C3': (94.692,129.634,115.599)
C1': (93.584,130.925,117.224)
C5': (93.398,127.506,116.173)
O4': (92.978,129.644,117.172)
C8: (94.446,130.113,119.483)
O2': (93.596,131.695,114.965)
C6: (96.616,132.634,120.636)
C5: (95.721,131.719,120.045)
C4: (95.210,132.054,118.805)
P: (94.572,125.687,117.635)
C4': (93.366,128.983,115.942)
C2': (94.409,131.084,115.945)
C2: (96.318,133.950,118.758)
N1: (96.895,133.764,119.955)
N3: (95.474,133.167,118.098)
N6: (97.206,132.441,121.817)
N7: (95.227,130.488,120.462)
N9: (94.380,131.016,118.449)
O5': (94.318,127.196,117.212)
O3': (95.009,129.481,114.228)
OP2: (95.389,125.682,118.869)
C3': (94.692,129.634,115.599)
C1': (93.584,130.925,117.224)
C5': (93.398,127.506,116.173)
O4': (92.978,129.644,117.172)
C8: (94.446,130.113,119.483)
O2': (93.596,131.695,114.965)
C6: (96.616,132.634,120.636)
C5: (95.721,131.719,120.045)
C4: (95.210,132.054,118.805)
P: (94.572,125.687,117.635)
C4': (93.366,128.983,115.942)
C2': (94.409,131.084,115.945)
C2: (96.318,133.950,118.758)
N1: (96.895,133.764,119.955)
N3: (95.474,133.167,118.098)
N6: (97.206,132.441,121.817)
N7: (95.227,130.488,120.462)
N9: (94.380,131.016,118.449)
O5': (94.318,127.196,117.212)
O3': (95.009,129.481,114.228)
Image (generated by PyMOL):