ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YJW:02041:02490

Extra

PDB:
ATOM 1 O3' G A2040 52.065 127.839 105.880 1.00 28.37 O
ATOM 2 P A A2041 52.575 127.756 104.355 1.00 28.46 P
ATOM 3 OP1 A A2041 53.032 126.361 104.154 1.00 26.57 O
ATOM 4 OP2 A A2041 53.513 128.878 104.103 1.00 29.49 O
ATOM 5 O5' A A2041 51.265 128.014 103.489 1.00 25.41 O
ATOM 6 C5' A A2041 50.124 127.160 103.632 1.00 28.29 C
ATOM 7 C4' A A2041 48.925 127.736 102.915 1.00 29.87 C
ATOM 8 O4' A A2041 48.685 129.086 103.382 1.00 30.67 O
ATOM 9 C3' A A2041 49.002 127.894 101.404 1.00 29.27 C
ATOM 10 O3' A A2041 48.699 126.675 100.742 1.00 29.01 O
ATOM 11 C2' A A2041 47.884 128.892 101.154 1.00 31.32 C
ATOM 12 O2' A A2041 46.618 128.263 101.223 1.00 34.79 O
ATOM 13 C1' A A2041 48.033 129.824 102.361 1.00 31.86 C
ATOM 14 N9 A A2041 48.805 131.037 102.079 1.00 32.43 N
ATOM 15 C8 A A2041 50.108 131.328 102.415 1.00 33.29 C
ATOM 16 N7 A A2041 50.510 132.505 102.001 1.00 32.02 N
ATOM 17 C5 A A2041 49.401 133.024 101.350 1.00 32.25 C
ATOM 18 C6 A A2041 49.183 134.237 100.687 1.00 32.63 C
ATOM 19 N6 A A2041 50.112 135.187 100.563 1.00 31.16 N
ATOM 20 N1 A A2041 47.960 134.445 100.145 1.00 33.23 N
ATOM 21 C2 A A2041 47.032 133.491 100.272 1.00 30.91 C
ATOM 22 N3 A A2041 47.118 132.311 100.871 1.00 29.93 N
ATOM 23 C4 A A2041 48.343 132.135 101.395 1.00 31.70 C
ATOM 24 P A A2042 49.521 126.247 99.435 1.00 28.93 P
ATOM 25 OP1 A A2042 49.562 127.407 98.515 1.00 30.84 O
ATOM 26 OP2 A A2042 48.954 124.969 98.960 1.00 30.11 O
ATOM 27 O5' A A2042 50.983 125.950 99.989 1.00 27.32 O
TER

ATOM 1 O3' U B2489 53.157 145.729 97.499 1.00 30.83 O
ATOM 2 P A B2490 52.461 145.121 98.809 1.00 32.59 P
ATOM 3 OP1 A B2490 51.887 146.258 99.550 1.00 33.69 O
ATOM 4 OP2 A B2490 53.402 144.198 99.493 1.00 33.53 O
ATOM 5 O5' A B2490 51.223 144.306 98.236 1.00 32.55 O
ATOM 6 C5' A B2490 51.337 142.928 97.903 1.00 30.84 C
ATOM 7 C4' A B2490 50.128 142.195 98.397 1.00 32.18 C
ATOM 8 O4' A B2490 50.576 140.965 99.009 1.00 33.91 O
ATOM 9 C3' A B2490 49.332 142.912 99.477 1.00 33.32 C
ATOM 10 O3' A B2490 48.003 142.422 99.487 1.00 33.69 O
ATOM 11 C2' A B2490 50.049 142.480 100.747 1.00 34.52 C
ATOM 12 O2' A B2490 49.201 142.501 101.873 1.00 37.75 O
ATOM 13 C1' A B2490 50.446 141.045 100.411 1.00 33.90 C
ATOM 14 N9 A B2490 51.723 140.652 100.998 1.00 33.90 N
ATOM 15 C8 A B2490 52.952 141.231 100.816 1.00 34.28 C
ATOM 16 N7 A B2490 53.912 140.655 101.491 1.00 35.54 N
ATOM 17 C5 A B2490 53.272 139.625 102.163 1.00 36.26 C
ATOM 18 C6 A B2490 53.736 138.648 103.053 1.00 37.76 C
ATOM 19 N6 A B2490 55.006 138.555 103.453 1.00 40.48 N
ATOM 20 N1 A B2490 52.839 137.758 103.532 1.00 36.66 N
ATOM 21 C2 A B2490 51.563 137.863 103.144 1.00 34.31 C
ATOM 22 N3 A B2490 51.006 138.742 102.325 1.00 34.16 N
ATOM 23 C4 A B2490 51.926 139.606 101.862 1.00 34.87 C
ATOM 24 P U B2491 46.824 143.263 98.791 1.00 34.88 P
ATOM 25 OP1 U B2491 47.372 144.018 97.630 1.00 33.08 O
ATOM 26 OP2 U B2491 46.108 143.980 99.864 1.00 33.90 O
ATOM 27 O5' U B2491 45.865 142.107 98.264 1.00 33.98 O
TER

Atoms:
OP1: (53.032,126.361,104.154)
OP2: (53.513,128.878,104.103)
C3': (49.002,127.894,101.404)
C1': (48.033,129.824,102.361)
C5': (50.124,127.160,103.632)
O4': (48.685,129.086,103.382)
C8: (50.108,131.328,102.415)
O2': (46.618,128.263,101.223)
C6: (49.183,134.237,100.687)
C5: (49.401,133.024,101.350)
C4: (48.343,132.135,101.395)
P: (52.575,127.756,104.355)
C4': (48.925,127.736,102.915)
C2': (47.884,128.892,101.154)
C2: (47.032,133.491,100.272)
N1: (47.960,134.445,100.145)
N3: (47.118,132.311,100.871)
N6: (50.112,135.187,100.563)
N7: (50.510,132.505,102.001)
N9: (48.805,131.037,102.079)
O5': (51.265,128.014,103.489)
O3': (48.699,126.675,100.742)
OP1: (51.887,146.258,99.550)
OP2: (53.402,144.198,99.493)
C3': (49.332,142.912,99.477)
C1': (50.446,141.045,100.411)
C5': (51.337,142.928,97.903)
O4': (50.576,140.965,99.009)
C8: (52.952,141.231,100.816)
O2': (49.201,142.501,101.873)
C6: (53.736,138.648,103.053)
C5: (53.272,139.625,102.163)
C4: (51.926,139.606,101.862)
P: (52.461,145.121,98.809)
C4': (50.128,142.195,98.397)
C2': (50.049,142.480,100.747)
C2: (51.563,137.863,103.144)
N1: (52.839,137.758,103.532)
N3: (51.006,138.742,102.325)
N6: (55.006,138.555,103.453)
N7: (53.912,140.655,101.491)
N9: (51.723,140.652,100.998)
O5': (51.223,144.306,98.236)
O3': (48.003,142.422,99.487)
Image (generated by PyMOL):
PyMOL image
show in jmol