Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2J01:A1970:A2491
Extra
PDB:
ATOM 1 O3' G A1969 -28.140 113.242 184.351 1.00 0.79 O
ATOM 2 P A A1970 -27.612 114.684 183.860 1.00 2.67 P
ATOM 3 OP1 A A1970 -28.812 115.386 183.319 1.00 10.93 O
ATOM 4 OP2 A A1970 -26.403 114.504 183.000 1.00 10.93 O
ATOM 5 O5' A A1970 -27.172 115.438 185.196 1.00 1.15 O
ATOM 6 C5' A A1970 -28.113 115.648 186.267 1.00 1.15 C
ATOM 7 C4' A A1970 -27.392 115.901 187.574 1.00 1.15 C
ATOM 8 O4' A A1970 -26.438 114.847 187.851 1.00 1.15 O
ATOM 9 C3' A A1970 -26.566 117.166 187.667 1.00 1.15 C
ATOM 10 O3' A A1970 -27.394 118.249 188.037 1.00 1.15 O
ATOM 11 C2' A A1970 -25.604 116.848 188.799 1.00 1.15 C
ATOM 12 O2' A A1970 -26.245 116.994 190.047 1.00 1.15 O
ATOM 13 C1' A A1970 -25.350 115.364 188.588 1.00 1.15 C
ATOM 14 N9 A A1970 -24.116 115.084 187.863 1.00 5.83 N
ATOM 15 C8 A A1970 -23.960 114.424 186.671 1.00 5.83 C
ATOM 16 N7 A A1970 -22.710 114.314 186.287 1.00 5.83 N
ATOM 17 C5 A A1970 -21.998 114.955 187.284 1.00 5.83 C
ATOM 18 C6 A A1970 -20.633 115.178 187.458 1.00 5.83 C
ATOM 19 N6 A A1970 -19.717 114.774 186.600 1.00 5.83 N
ATOM 20 N1 A A1970 -20.234 115.838 188.561 1.00 5.83 N
ATOM 21 C2 A A1970 -21.171 116.241 189.434 1.00 5.83 C
ATOM 22 N3 A A1970 -22.500 116.087 189.381 1.00 5.83 N
ATOM 23 C4 A A1970 -22.849 115.430 188.264 1.00 5.83 C
ATOM 24 P C A1971 -27.449 119.543 187.107 1.00 6.54 P
ATOM 25 OP1 C A1971 -26.044 119.826 186.736 1.00 7.77 O
ATOM 26 OP2 C A1971 -28.245 120.569 187.822 1.00 7.77 O
ATOM 27 O5' C A1971 -28.266 119.045 185.826 1.00 0.79 O
TER
ATOM 1 O3' U B2490 -8.235 113.082 184.947 1.00 18.07 O
ATOM 2 P A B2491 -9.013 111.750 185.389 1.00 24.44 P
ATOM 3 OP1 A B2491 -8.344 111.287 186.629 1.00 29.29 O
ATOM 4 OP2 A B2491 -9.091 110.844 184.213 1.00 29.29 O
ATOM 5 O5' A B2491 -10.486 112.242 185.737 1.00 15.20 O
ATOM 6 C5' A B2491 -10.690 113.512 186.344 1.00 15.20 C
ATOM 7 C4' A B2491 -11.878 113.465 187.256 1.00 15.20 C
ATOM 8 O4' A B2491 -13.081 113.415 186.453 1.00 15.20 O
ATOM 9 C3' A B2491 -11.916 112.283 188.213 1.00 15.20 C
ATOM 10 O3' A B2491 -12.476 112.708 189.440 1.00 15.20 O
ATOM 11 C2' A B2491 -12.901 111.334 187.540 1.00 15.20 C
ATOM 12 O2' A B2491 -13.630 110.567 188.479 1.00 15.20 O
ATOM 13 C1' A B2491 -13.847 112.297 186.816 1.00 15.20 C
ATOM 14 N9 A B2491 -14.387 111.717 185.592 1.00 0.79 N
ATOM 15 C8 A B2491 -13.690 111.119 184.570 1.00 0.79 C
ATOM 16 N7 A B2491 -14.457 110.632 183.629 1.00 0.79 N
ATOM 17 C5 A B2491 -15.741 110.938 184.055 1.00 0.79 C
ATOM 18 C6 A B2491 -17.005 110.658 183.514 1.00 0.79 C
ATOM 19 N6 A B2491 -17.193 109.921 182.412 1.00 0.79 N
ATOM 20 N1 A B2491 -18.086 111.139 184.165 1.00 0.79 N
ATOM 21 C2 A B2491 -17.892 111.810 185.305 1.00 0.79 C
ATOM 22 N3 A B2491 -16.756 112.097 185.933 1.00 0.79 N
ATOM 23 C4 A B2491 -15.709 111.631 185.246 1.00 0.79 C
ATOM 24 P U B2492 -11.537 112.945 190.717 1.00 33.46 P
ATOM 25 OP1 U B2492 -10.112 113.100 190.301 1.00 28.91 O
ATOM 26 OP2 U B2492 -11.902 111.909 191.720 1.00 28.91 O
ATOM 27 O5' U B2492 -12.083 114.343 191.242 1.00 30.16 O
TER
ATOM 2 P A A1970 -27.612 114.684 183.860 1.00 2.67 P
ATOM 3 OP1 A A1970 -28.812 115.386 183.319 1.00 10.93 O
ATOM 4 OP2 A A1970 -26.403 114.504 183.000 1.00 10.93 O
ATOM 5 O5' A A1970 -27.172 115.438 185.196 1.00 1.15 O
ATOM 6 C5' A A1970 -28.113 115.648 186.267 1.00 1.15 C
ATOM 7 C4' A A1970 -27.392 115.901 187.574 1.00 1.15 C
ATOM 8 O4' A A1970 -26.438 114.847 187.851 1.00 1.15 O
ATOM 9 C3' A A1970 -26.566 117.166 187.667 1.00 1.15 C
ATOM 10 O3' A A1970 -27.394 118.249 188.037 1.00 1.15 O
ATOM 11 C2' A A1970 -25.604 116.848 188.799 1.00 1.15 C
ATOM 12 O2' A A1970 -26.245 116.994 190.047 1.00 1.15 O
ATOM 13 C1' A A1970 -25.350 115.364 188.588 1.00 1.15 C
ATOM 14 N9 A A1970 -24.116 115.084 187.863 1.00 5.83 N
ATOM 15 C8 A A1970 -23.960 114.424 186.671 1.00 5.83 C
ATOM 16 N7 A A1970 -22.710 114.314 186.287 1.00 5.83 N
ATOM 17 C5 A A1970 -21.998 114.955 187.284 1.00 5.83 C
ATOM 18 C6 A A1970 -20.633 115.178 187.458 1.00 5.83 C
ATOM 19 N6 A A1970 -19.717 114.774 186.600 1.00 5.83 N
ATOM 20 N1 A A1970 -20.234 115.838 188.561 1.00 5.83 N
ATOM 21 C2 A A1970 -21.171 116.241 189.434 1.00 5.83 C
ATOM 22 N3 A A1970 -22.500 116.087 189.381 1.00 5.83 N
ATOM 23 C4 A A1970 -22.849 115.430 188.264 1.00 5.83 C
ATOM 24 P C A1971 -27.449 119.543 187.107 1.00 6.54 P
ATOM 25 OP1 C A1971 -26.044 119.826 186.736 1.00 7.77 O
ATOM 26 OP2 C A1971 -28.245 120.569 187.822 1.00 7.77 O
ATOM 27 O5' C A1971 -28.266 119.045 185.826 1.00 0.79 O
TER
ATOM 1 O3' U B2490 -8.235 113.082 184.947 1.00 18.07 O
ATOM 2 P A B2491 -9.013 111.750 185.389 1.00 24.44 P
ATOM 3 OP1 A B2491 -8.344 111.287 186.629 1.00 29.29 O
ATOM 4 OP2 A B2491 -9.091 110.844 184.213 1.00 29.29 O
ATOM 5 O5' A B2491 -10.486 112.242 185.737 1.00 15.20 O
ATOM 6 C5' A B2491 -10.690 113.512 186.344 1.00 15.20 C
ATOM 7 C4' A B2491 -11.878 113.465 187.256 1.00 15.20 C
ATOM 8 O4' A B2491 -13.081 113.415 186.453 1.00 15.20 O
ATOM 9 C3' A B2491 -11.916 112.283 188.213 1.00 15.20 C
ATOM 10 O3' A B2491 -12.476 112.708 189.440 1.00 15.20 O
ATOM 11 C2' A B2491 -12.901 111.334 187.540 1.00 15.20 C
ATOM 12 O2' A B2491 -13.630 110.567 188.479 1.00 15.20 O
ATOM 13 C1' A B2491 -13.847 112.297 186.816 1.00 15.20 C
ATOM 14 N9 A B2491 -14.387 111.717 185.592 1.00 0.79 N
ATOM 15 C8 A B2491 -13.690 111.119 184.570 1.00 0.79 C
ATOM 16 N7 A B2491 -14.457 110.632 183.629 1.00 0.79 N
ATOM 17 C5 A B2491 -15.741 110.938 184.055 1.00 0.79 C
ATOM 18 C6 A B2491 -17.005 110.658 183.514 1.00 0.79 C
ATOM 19 N6 A B2491 -17.193 109.921 182.412 1.00 0.79 N
ATOM 20 N1 A B2491 -18.086 111.139 184.165 1.00 0.79 N
ATOM 21 C2 A B2491 -17.892 111.810 185.305 1.00 0.79 C
ATOM 22 N3 A B2491 -16.756 112.097 185.933 1.00 0.79 N
ATOM 23 C4 A B2491 -15.709 111.631 185.246 1.00 0.79 C
ATOM 24 P U B2492 -11.537 112.945 190.717 1.00 33.46 P
ATOM 25 OP1 U B2492 -10.112 113.100 190.301 1.00 28.91 O
ATOM 26 OP2 U B2492 -11.902 111.909 191.720 1.00 28.91 O
ATOM 27 O5' U B2492 -12.083 114.343 191.242 1.00 30.16 O
TER
Atoms:
OP1: (-28.812,115.386,183.319)
OP2: (-26.403,114.504,183.000)
C3': (-26.566,117.166,187.667)
C1': (-25.350,115.364,188.588)
C5': (-28.113,115.648,186.267)
O4': (-26.438,114.847,187.851)
C8: (-23.960,114.424,186.671)
O2': (-26.245,116.994,190.047)
C6: (-20.633,115.178,187.458)
C5: (-21.998,114.955,187.284)
C4: (-22.849,115.430,188.264)
P: (-27.612,114.684,183.860)
C4': (-27.392,115.901,187.574)
C2': (-25.604,116.848,188.799)
C2: (-21.171,116.241,189.434)
N1: (-20.234,115.838,188.561)
N3: (-22.500,116.087,189.381)
N6: (-19.717,114.774,186.600)
N7: (-22.710,114.314,186.287)
N9: (-24.116,115.084,187.863)
O5': (-27.172,115.438,185.196)
O3': (-27.394,118.249,188.037)
OP2: (-26.403,114.504,183.000)
C3': (-26.566,117.166,187.667)
C1': (-25.350,115.364,188.588)
C5': (-28.113,115.648,186.267)
O4': (-26.438,114.847,187.851)
C8: (-23.960,114.424,186.671)
O2': (-26.245,116.994,190.047)
C6: (-20.633,115.178,187.458)
C5: (-21.998,114.955,187.284)
C4: (-22.849,115.430,188.264)
P: (-27.612,114.684,183.860)
C4': (-27.392,115.901,187.574)
C2': (-25.604,116.848,188.799)
C2: (-21.171,116.241,189.434)
N1: (-20.234,115.838,188.561)
N3: (-22.500,116.087,189.381)
N6: (-19.717,114.774,186.600)
N7: (-22.710,114.314,186.287)
N9: (-24.116,115.084,187.863)
O5': (-27.172,115.438,185.196)
O3': (-27.394,118.249,188.037)
OP1: (-8.344,111.287,186.629)
OP2: (-9.091,110.844,184.213)
C3': (-11.916,112.283,188.213)
C1': (-13.847,112.297,186.816)
C5': (-10.690,113.512,186.344)
O4': (-13.081,113.415,186.453)
C8: (-13.690,111.119,184.570)
O2': (-13.630,110.567,188.479)
C6: (-17.005,110.658,183.514)
C5: (-15.741,110.938,184.055)
C4: (-15.709,111.631,185.246)
P: (-9.013,111.750,185.389)
C4': (-11.878,113.465,187.256)
C2': (-12.901,111.334,187.540)
C2: (-17.892,111.810,185.305)
N1: (-18.086,111.139,184.165)
N3: (-16.756,112.097,185.933)
N6: (-17.193,109.921,182.412)
N7: (-14.457,110.632,183.629)
N9: (-14.387,111.717,185.592)
O5': (-10.486,112.242,185.737)
O3': (-12.476,112.708,189.440)
OP2: (-9.091,110.844,184.213)
C3': (-11.916,112.283,188.213)
C1': (-13.847,112.297,186.816)
C5': (-10.690,113.512,186.344)
O4': (-13.081,113.415,186.453)
C8: (-13.690,111.119,184.570)
O2': (-13.630,110.567,188.479)
C6: (-17.005,110.658,183.514)
C5: (-15.741,110.938,184.055)
C4: (-15.709,111.631,185.246)
P: (-9.013,111.750,185.389)
C4': (-11.878,113.465,187.256)
C2': (-12.901,111.334,187.540)
C2: (-17.892,111.810,185.305)
N1: (-18.086,111.139,184.165)
N3: (-16.756,112.097,185.933)
N6: (-17.193,109.921,182.412)
N7: (-14.457,110.632,183.629)
N9: (-14.387,111.717,185.592)
O5': (-10.486,112.242,185.737)
O3': (-12.476,112.708,189.440)
Image (generated by PyMOL):