Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2J03:A1970:A2491
Extra
PDB:
ATOM 1 O3' G A1969 -82.502 -72.013 -1.460 1.00 1.96 O
ATOM 2 P A A1970 -81.971 -71.568 0.002 1.00 7.29 P
ATOM 3 OP1 A A1970 -83.158 -71.038 0.731 1.00 17.37 O
ATOM 4 OP2 A A1970 -80.761 -70.707 -0.169 1.00 17.37 O
ATOM 5 O5' A A1970 -81.516 -72.930 0.704 1.00 3.20 O
ATOM 6 C5' A A1970 -82.470 -73.994 0.896 1.00 3.20 C
ATOM 7 C4' A A1970 -81.779 -75.325 1.096 1.00 3.20 C
ATOM 8 O4' A A1970 -80.825 -75.576 0.034 1.00 3.20 O
ATOM 9 C3' A A1970 -80.974 -75.471 2.365 1.00 3.20 C
ATOM 10 O3' A A1970 -81.832 -75.864 3.404 1.00 3.20 O
ATOM 11 C2' A A1970 -80.018 -76.595 2.024 1.00 3.20 C
ATOM 12 O2' A A1970 -80.696 -77.823 2.154 1.00 3.20 O
ATOM 13 C1' A A1970 -79.752 -76.341 0.540 1.00 3.20 C
ATOM 14 N9 A A1970 -78.506 -75.630 0.270 1.00 0.79 N
ATOM 15 C8 A A1970 -78.330 -74.440 -0.375 1.00 0.79 C
ATOM 16 N7 A A1970 -77.074 -74.076 -0.484 1.00 0.79 N
ATOM 17 C5 A A1970 -76.380 -75.088 0.144 1.00 0.79 C
ATOM 18 C6 A A1970 -75.018 -75.288 0.362 1.00 0.79 C
ATOM 19 N6 A A1970 -74.083 -74.445 -0.047 1.00 0.79 N
ATOM 20 N1 A A1970 -74.641 -76.401 1.021 1.00 0.79 N
ATOM 21 C2 A A1970 -75.594 -77.257 1.424 1.00 0.79 C
ATOM 22 N3 A A1970 -76.924 -77.181 1.270 1.00 0.79 N
ATOM 23 C4 A A1970 -77.249 -76.056 0.615 1.00 0.79 C
ATOM 24 P C A1971 -81.898 -74.981 4.727 1.00 0.79 P
ATOM 25 OP1 C A1971 -80.480 -74.670 5.015 1.00 3.65 O
ATOM 26 OP2 C A1971 -82.723 -75.675 5.749 1.00 3.65 O
ATOM 27 O5' C A1971 -82.665 -73.664 4.268 1.00 13.85 O
TER
ATOM 1 O3' U B2490 -62.632 -72.875 -1.589 1.00 8.65 O
ATOM 2 P A B2491 -63.408 -73.255 -2.938 1.00 10.42 P
ATOM 3 OP1 A B2491 -62.726 -74.479 -3.411 1.00 15.27 O
ATOM 4 OP2 A B2491 -63.491 -72.061 -3.824 1.00 15.27 O
ATOM 5 O5' A B2491 -64.878 -73.626 -2.469 1.00 1.79 O
ATOM 6 C5' A B2491 -65.081 -74.262 -1.212 1.00 1.79 C
ATOM 7 C4' A B2491 -66.290 -75.145 -1.275 1.00 1.79 C
ATOM 8 O4' A B2491 -67.478 -74.321 -1.306 1.00 1.79 O
ATOM 9 C3' A B2491 -66.341 -76.068 -2.483 1.00 1.79 C
ATOM 10 O3' A B2491 -66.905 -77.332 -2.117 1.00 1.79 O
ATOM 11 C2' A B2491 -67.304 -75.341 -3.412 1.00 1.79 C
ATOM 12 O2' A B2491 -68.043 -76.239 -4.223 1.00 1.79 O
ATOM 13 C1' A B2491 -68.242 -74.636 -2.430 1.00 1.79 C
ATOM 14 N9 A B2491 -68.764 -73.392 -2.982 1.00 3.80 N
ATOM 15 C8 A B2491 -68.057 -72.377 -3.551 1.00 3.80 C
ATOM 16 N7 A B2491 -68.810 -71.423 -4.041 1.00 3.80 N
ATOM 17 C5 A B2491 -70.094 -71.838 -3.758 1.00 3.80 C
ATOM 18 C6 A B2491 -71.341 -71.283 -4.046 1.00 3.80 C
ATOM 19 N6 A B2491 -71.509 -70.169 -4.750 1.00 3.80 N
ATOM 20 N1 A B2491 -72.433 -71.923 -3.603 1.00 3.80 N
ATOM 21 C2 A B2491 -72.262 -73.064 -2.941 1.00 3.80 C
ATOM 22 N3 A B2491 -71.135 -73.705 -2.635 1.00 3.80 N
ATOM 23 C4 A B2491 -70.078 -73.029 -3.079 1.00 3.80 C
ATOM 24 P U B2492 -65.958 -78.634 -1.932 1.00 22.99 P
ATOM 25 OP1 U B2492 -64.528 -78.254 -1.765 1.00 18.44 O
ATOM 26 OP2 U B2492 -66.327 -79.606 -2.989 1.00 18.44 O
ATOM 27 O5' U B2492 -66.515 -79.189 -0.550 1.00 4.34 O
TER
ATOM 2 P A A1970 -81.971 -71.568 0.002 1.00 7.29 P
ATOM 3 OP1 A A1970 -83.158 -71.038 0.731 1.00 17.37 O
ATOM 4 OP2 A A1970 -80.761 -70.707 -0.169 1.00 17.37 O
ATOM 5 O5' A A1970 -81.516 -72.930 0.704 1.00 3.20 O
ATOM 6 C5' A A1970 -82.470 -73.994 0.896 1.00 3.20 C
ATOM 7 C4' A A1970 -81.779 -75.325 1.096 1.00 3.20 C
ATOM 8 O4' A A1970 -80.825 -75.576 0.034 1.00 3.20 O
ATOM 9 C3' A A1970 -80.974 -75.471 2.365 1.00 3.20 C
ATOM 10 O3' A A1970 -81.832 -75.864 3.404 1.00 3.20 O
ATOM 11 C2' A A1970 -80.018 -76.595 2.024 1.00 3.20 C
ATOM 12 O2' A A1970 -80.696 -77.823 2.154 1.00 3.20 O
ATOM 13 C1' A A1970 -79.752 -76.341 0.540 1.00 3.20 C
ATOM 14 N9 A A1970 -78.506 -75.630 0.270 1.00 0.79 N
ATOM 15 C8 A A1970 -78.330 -74.440 -0.375 1.00 0.79 C
ATOM 16 N7 A A1970 -77.074 -74.076 -0.484 1.00 0.79 N
ATOM 17 C5 A A1970 -76.380 -75.088 0.144 1.00 0.79 C
ATOM 18 C6 A A1970 -75.018 -75.288 0.362 1.00 0.79 C
ATOM 19 N6 A A1970 -74.083 -74.445 -0.047 1.00 0.79 N
ATOM 20 N1 A A1970 -74.641 -76.401 1.021 1.00 0.79 N
ATOM 21 C2 A A1970 -75.594 -77.257 1.424 1.00 0.79 C
ATOM 22 N3 A A1970 -76.924 -77.181 1.270 1.00 0.79 N
ATOM 23 C4 A A1970 -77.249 -76.056 0.615 1.00 0.79 C
ATOM 24 P C A1971 -81.898 -74.981 4.727 1.00 0.79 P
ATOM 25 OP1 C A1971 -80.480 -74.670 5.015 1.00 3.65 O
ATOM 26 OP2 C A1971 -82.723 -75.675 5.749 1.00 3.65 O
ATOM 27 O5' C A1971 -82.665 -73.664 4.268 1.00 13.85 O
TER
ATOM 1 O3' U B2490 -62.632 -72.875 -1.589 1.00 8.65 O
ATOM 2 P A B2491 -63.408 -73.255 -2.938 1.00 10.42 P
ATOM 3 OP1 A B2491 -62.726 -74.479 -3.411 1.00 15.27 O
ATOM 4 OP2 A B2491 -63.491 -72.061 -3.824 1.00 15.27 O
ATOM 5 O5' A B2491 -64.878 -73.626 -2.469 1.00 1.79 O
ATOM 6 C5' A B2491 -65.081 -74.262 -1.212 1.00 1.79 C
ATOM 7 C4' A B2491 -66.290 -75.145 -1.275 1.00 1.79 C
ATOM 8 O4' A B2491 -67.478 -74.321 -1.306 1.00 1.79 O
ATOM 9 C3' A B2491 -66.341 -76.068 -2.483 1.00 1.79 C
ATOM 10 O3' A B2491 -66.905 -77.332 -2.117 1.00 1.79 O
ATOM 11 C2' A B2491 -67.304 -75.341 -3.412 1.00 1.79 C
ATOM 12 O2' A B2491 -68.043 -76.239 -4.223 1.00 1.79 O
ATOM 13 C1' A B2491 -68.242 -74.636 -2.430 1.00 1.79 C
ATOM 14 N9 A B2491 -68.764 -73.392 -2.982 1.00 3.80 N
ATOM 15 C8 A B2491 -68.057 -72.377 -3.551 1.00 3.80 C
ATOM 16 N7 A B2491 -68.810 -71.423 -4.041 1.00 3.80 N
ATOM 17 C5 A B2491 -70.094 -71.838 -3.758 1.00 3.80 C
ATOM 18 C6 A B2491 -71.341 -71.283 -4.046 1.00 3.80 C
ATOM 19 N6 A B2491 -71.509 -70.169 -4.750 1.00 3.80 N
ATOM 20 N1 A B2491 -72.433 -71.923 -3.603 1.00 3.80 N
ATOM 21 C2 A B2491 -72.262 -73.064 -2.941 1.00 3.80 C
ATOM 22 N3 A B2491 -71.135 -73.705 -2.635 1.00 3.80 N
ATOM 23 C4 A B2491 -70.078 -73.029 -3.079 1.00 3.80 C
ATOM 24 P U B2492 -65.958 -78.634 -1.932 1.00 22.99 P
ATOM 25 OP1 U B2492 -64.528 -78.254 -1.765 1.00 18.44 O
ATOM 26 OP2 U B2492 -66.327 -79.606 -2.989 1.00 18.44 O
ATOM 27 O5' U B2492 -66.515 -79.189 -0.550 1.00 4.34 O
TER
Atoms:
OP1: (-83.158,-71.038,0.731)
OP2: (-80.761,-70.707,-0.169)
C3': (-80.974,-75.471,2.365)
C1': (-79.752,-76.341,0.540)
C5': (-82.470,-73.994,0.896)
O4': (-80.825,-75.576,0.034)
C8: (-78.330,-74.440,-0.375)
O2': (-80.696,-77.823,2.154)
C6: (-75.018,-75.288,0.362)
C5: (-76.380,-75.088,0.144)
C4: (-77.249,-76.056,0.615)
P: (-81.971,-71.568,0.002)
C4': (-81.779,-75.325,1.096)
C2': (-80.018,-76.595,2.024)
C2: (-75.594,-77.257,1.424)
N1: (-74.641,-76.401,1.021)
N3: (-76.924,-77.181,1.270)
N6: (-74.083,-74.445,-0.047)
N7: (-77.074,-74.076,-0.484)
N9: (-78.506,-75.630,0.270)
O5': (-81.516,-72.930,0.704)
O3': (-81.832,-75.864,3.404)
OP2: (-80.761,-70.707,-0.169)
C3': (-80.974,-75.471,2.365)
C1': (-79.752,-76.341,0.540)
C5': (-82.470,-73.994,0.896)
O4': (-80.825,-75.576,0.034)
C8: (-78.330,-74.440,-0.375)
O2': (-80.696,-77.823,2.154)
C6: (-75.018,-75.288,0.362)
C5: (-76.380,-75.088,0.144)
C4: (-77.249,-76.056,0.615)
P: (-81.971,-71.568,0.002)
C4': (-81.779,-75.325,1.096)
C2': (-80.018,-76.595,2.024)
C2: (-75.594,-77.257,1.424)
N1: (-74.641,-76.401,1.021)
N3: (-76.924,-77.181,1.270)
N6: (-74.083,-74.445,-0.047)
N7: (-77.074,-74.076,-0.484)
N9: (-78.506,-75.630,0.270)
O5': (-81.516,-72.930,0.704)
O3': (-81.832,-75.864,3.404)
OP1: (-62.726,-74.479,-3.411)
OP2: (-63.491,-72.061,-3.824)
C3': (-66.341,-76.068,-2.483)
C1': (-68.242,-74.636,-2.430)
C5': (-65.081,-74.262,-1.212)
O4': (-67.478,-74.321,-1.306)
C8: (-68.057,-72.377,-3.551)
O2': (-68.043,-76.239,-4.223)
C6: (-71.341,-71.283,-4.046)
C5: (-70.094,-71.838,-3.758)
C4: (-70.078,-73.029,-3.079)
P: (-63.408,-73.255,-2.938)
C4': (-66.290,-75.145,-1.275)
C2': (-67.304,-75.341,-3.412)
C2: (-72.262,-73.064,-2.941)
N1: (-72.433,-71.923,-3.603)
N3: (-71.135,-73.705,-2.635)
N6: (-71.509,-70.169,-4.750)
N7: (-68.810,-71.423,-4.041)
N9: (-68.764,-73.392,-2.982)
O5': (-64.878,-73.626,-2.469)
O3': (-66.905,-77.332,-2.117)
OP2: (-63.491,-72.061,-3.824)
C3': (-66.341,-76.068,-2.483)
C1': (-68.242,-74.636,-2.430)
C5': (-65.081,-74.262,-1.212)
O4': (-67.478,-74.321,-1.306)
C8: (-68.057,-72.377,-3.551)
O2': (-68.043,-76.239,-4.223)
C6: (-71.341,-71.283,-4.046)
C5: (-70.094,-71.838,-3.758)
C4: (-70.078,-73.029,-3.079)
P: (-63.408,-73.255,-2.938)
C4': (-66.290,-75.145,-1.275)
C2': (-67.304,-75.341,-3.412)
C2: (-72.262,-73.064,-2.941)
N1: (-72.433,-71.923,-3.603)
N3: (-71.135,-73.705,-2.635)
N6: (-71.509,-70.169,-4.750)
N7: (-68.810,-71.423,-4.041)
N9: (-68.764,-73.392,-2.982)
O5': (-64.878,-73.626,-2.469)
O3': (-66.905,-77.332,-2.117)
Image (generated by PyMOL):