Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2OTJ:02041:02490
Extra
PDB:
ATOM 1 O3' G A2040 52.059 127.395 105.728 1.00 34.65 O
ATOM 2 P A A2041 52.516 127.295 104.190 1.00 35.39 P
ATOM 3 OP1 A A2041 52.937 125.888 103.985 1.00 32.54 O
ATOM 4 OP2 A A2041 53.442 128.396 103.849 1.00 33.82 O
ATOM 5 O5' A A2041 51.182 127.571 103.373 1.00 35.17 O
ATOM 6 C5' A A2041 50.042 126.715 103.511 1.00 35.14 C
ATOM 7 C4' A A2041 48.879 127.267 102.729 1.00 35.52 C
ATOM 8 O4' A A2041 48.629 128.635 103.144 1.00 36.04 O
ATOM 9 C3' A A2041 49.063 127.388 101.224 1.00 36.08 C
ATOM 10 O3' A A2041 48.788 126.146 100.598 1.00 35.18 O
ATOM 11 C2' A A2041 47.986 128.398 100.865 1.00 36.18 C
ATOM 12 O2' A A2041 46.718 127.774 100.856 1.00 37.32 O
ATOM 13 C1' A A2041 48.045 129.349 102.066 1.00 36.43 C
ATOM 14 N9 A A2041 48.807 130.577 101.847 1.00 36.29 N
ATOM 15 C8 A A2041 50.079 130.859 102.268 1.00 37.01 C
ATOM 16 N7 A A2041 50.499 132.050 101.923 1.00 36.71 N
ATOM 17 C5 A A2041 49.429 132.589 101.224 1.00 35.87 C
ATOM 18 C6 A A2041 49.243 133.825 100.591 1.00 36.46 C
ATOM 19 N6 A A2041 50.168 134.791 100.563 1.00 36.42 N
ATOM 20 N1 A A2041 48.059 134.042 99.978 1.00 36.51 N
ATOM 21 C2 A A2041 47.135 133.085 100.016 1.00 35.21 C
ATOM 22 N3 A A2041 47.190 131.890 100.581 1.00 35.31 N
ATOM 23 C4 A A2041 48.379 131.697 101.173 1.00 35.78 C
ATOM 24 P A A2042 49.584 125.720 99.273 1.00 35.85 P
ATOM 25 OP1 A A2042 49.633 126.888 98.356 1.00 36.04 O
ATOM 26 OP2 A A2042 48.978 124.452 98.814 1.00 35.97 O
ATOM 27 O5' A A2042 51.043 125.364 99.787 1.00 34.70 O
TER
ATOM 1 O3' U B2489 53.075 145.320 97.341 1.00 34.99 O
ATOM 2 P A B2490 52.347 144.675 98.610 1.00 35.86 P
ATOM 3 OP1 A B2490 51.658 145.750 99.339 1.00 36.90 O
ATOM 4 OP2 A B2490 53.340 143.836 99.315 1.00 37.95 O
ATOM 5 O5' A B2490 51.204 143.771 97.969 1.00 38.30 O
ATOM 6 C5' A B2490 51.312 142.354 97.956 1.00 36.98 C
ATOM 7 C4' A B2490 49.989 141.736 98.291 1.00 38.23 C
ATOM 8 O4' A B2490 50.285 140.458 98.890 1.00 39.72 O
ATOM 9 C3' A B2490 49.181 142.465 99.354 1.00 39.40 C
ATOM 10 O3' A B2490 47.843 141.986 99.363 1.00 39.96 O
ATOM 11 C2' A B2490 49.869 142.009 100.632 1.00 39.61 C
ATOM 12 O2' A B2490 49.023 142.069 101.766 1.00 39.88 O
ATOM 13 C1' A B2490 50.216 140.560 100.295 1.00 39.65 C
ATOM 14 N9 A B2490 51.511 140.166 100.838 1.00 39.43 N
ATOM 15 C8 A B2490 52.720 140.758 100.617 1.00 39.58 C
ATOM 16 N7 A B2490 53.704 140.211 101.282 1.00 40.30 N
ATOM 17 C5 A B2490 53.099 139.182 101.983 1.00 39.87 C
ATOM 18 C6 A B2490 53.599 138.241 102.882 1.00 40.68 C
ATOM 19 N6 A B2490 54.880 138.187 103.254 1.00 42.46 N
ATOM 20 N1 A B2490 52.733 137.345 103.399 1.00 39.58 N
ATOM 21 C2 A B2490 51.451 137.409 103.030 1.00 39.22 C
ATOM 22 N3 A B2490 50.860 138.253 102.200 1.00 39.85 N
ATOM 23 C4 A B2490 51.752 139.129 101.705 1.00 39.73 C
ATOM 24 P U B2491 46.681 142.791 98.602 1.00 41.89 P
ATOM 25 OP1 U B2491 47.292 143.769 97.668 1.00 39.66 O
ATOM 26 OP2 U B2491 45.726 143.254 99.629 1.00 40.00 O
ATOM 27 O5' U B2491 45.969 141.633 97.764 1.00 40.51 O
TER
ATOM 2 P A A2041 52.516 127.295 104.190 1.00 35.39 P
ATOM 3 OP1 A A2041 52.937 125.888 103.985 1.00 32.54 O
ATOM 4 OP2 A A2041 53.442 128.396 103.849 1.00 33.82 O
ATOM 5 O5' A A2041 51.182 127.571 103.373 1.00 35.17 O
ATOM 6 C5' A A2041 50.042 126.715 103.511 1.00 35.14 C
ATOM 7 C4' A A2041 48.879 127.267 102.729 1.00 35.52 C
ATOM 8 O4' A A2041 48.629 128.635 103.144 1.00 36.04 O
ATOM 9 C3' A A2041 49.063 127.388 101.224 1.00 36.08 C
ATOM 10 O3' A A2041 48.788 126.146 100.598 1.00 35.18 O
ATOM 11 C2' A A2041 47.986 128.398 100.865 1.00 36.18 C
ATOM 12 O2' A A2041 46.718 127.774 100.856 1.00 37.32 O
ATOM 13 C1' A A2041 48.045 129.349 102.066 1.00 36.43 C
ATOM 14 N9 A A2041 48.807 130.577 101.847 1.00 36.29 N
ATOM 15 C8 A A2041 50.079 130.859 102.268 1.00 37.01 C
ATOM 16 N7 A A2041 50.499 132.050 101.923 1.00 36.71 N
ATOM 17 C5 A A2041 49.429 132.589 101.224 1.00 35.87 C
ATOM 18 C6 A A2041 49.243 133.825 100.591 1.00 36.46 C
ATOM 19 N6 A A2041 50.168 134.791 100.563 1.00 36.42 N
ATOM 20 N1 A A2041 48.059 134.042 99.978 1.00 36.51 N
ATOM 21 C2 A A2041 47.135 133.085 100.016 1.00 35.21 C
ATOM 22 N3 A A2041 47.190 131.890 100.581 1.00 35.31 N
ATOM 23 C4 A A2041 48.379 131.697 101.173 1.00 35.78 C
ATOM 24 P A A2042 49.584 125.720 99.273 1.00 35.85 P
ATOM 25 OP1 A A2042 49.633 126.888 98.356 1.00 36.04 O
ATOM 26 OP2 A A2042 48.978 124.452 98.814 1.00 35.97 O
ATOM 27 O5' A A2042 51.043 125.364 99.787 1.00 34.70 O
TER
ATOM 1 O3' U B2489 53.075 145.320 97.341 1.00 34.99 O
ATOM 2 P A B2490 52.347 144.675 98.610 1.00 35.86 P
ATOM 3 OP1 A B2490 51.658 145.750 99.339 1.00 36.90 O
ATOM 4 OP2 A B2490 53.340 143.836 99.315 1.00 37.95 O
ATOM 5 O5' A B2490 51.204 143.771 97.969 1.00 38.30 O
ATOM 6 C5' A B2490 51.312 142.354 97.956 1.00 36.98 C
ATOM 7 C4' A B2490 49.989 141.736 98.291 1.00 38.23 C
ATOM 8 O4' A B2490 50.285 140.458 98.890 1.00 39.72 O
ATOM 9 C3' A B2490 49.181 142.465 99.354 1.00 39.40 C
ATOM 10 O3' A B2490 47.843 141.986 99.363 1.00 39.96 O
ATOM 11 C2' A B2490 49.869 142.009 100.632 1.00 39.61 C
ATOM 12 O2' A B2490 49.023 142.069 101.766 1.00 39.88 O
ATOM 13 C1' A B2490 50.216 140.560 100.295 1.00 39.65 C
ATOM 14 N9 A B2490 51.511 140.166 100.838 1.00 39.43 N
ATOM 15 C8 A B2490 52.720 140.758 100.617 1.00 39.58 C
ATOM 16 N7 A B2490 53.704 140.211 101.282 1.00 40.30 N
ATOM 17 C5 A B2490 53.099 139.182 101.983 1.00 39.87 C
ATOM 18 C6 A B2490 53.599 138.241 102.882 1.00 40.68 C
ATOM 19 N6 A B2490 54.880 138.187 103.254 1.00 42.46 N
ATOM 20 N1 A B2490 52.733 137.345 103.399 1.00 39.58 N
ATOM 21 C2 A B2490 51.451 137.409 103.030 1.00 39.22 C
ATOM 22 N3 A B2490 50.860 138.253 102.200 1.00 39.85 N
ATOM 23 C4 A B2490 51.752 139.129 101.705 1.00 39.73 C
ATOM 24 P U B2491 46.681 142.791 98.602 1.00 41.89 P
ATOM 25 OP1 U B2491 47.292 143.769 97.668 1.00 39.66 O
ATOM 26 OP2 U B2491 45.726 143.254 99.629 1.00 40.00 O
ATOM 27 O5' U B2491 45.969 141.633 97.764 1.00 40.51 O
TER
Atoms:
OP1: (52.937,125.888,103.985)
OP2: (53.442,128.396,103.849)
C3': (49.063,127.388,101.224)
C1': (48.045,129.349,102.066)
C5': (50.042,126.715,103.511)
O4': (48.629,128.635,103.144)
C8: (50.079,130.859,102.268)
O2': (46.718,127.774,100.856)
C6: (49.243,133.825,100.591)
C5: (49.429,132.589,101.224)
C4: (48.379,131.697,101.173)
P: (52.516,127.295,104.190)
C4': (48.879,127.267,102.729)
C2': (47.986,128.398,100.865)
C2: (47.135,133.085,100.016)
N1: (48.059,134.042,99.978)
N3: (47.190,131.890,100.581)
N6: (50.168,134.791,100.563)
N7: (50.499,132.050,101.923)
N9: (48.807,130.577,101.847)
O5': (51.182,127.571,103.373)
O3': (48.788,126.146,100.598)
OP2: (53.442,128.396,103.849)
C3': (49.063,127.388,101.224)
C1': (48.045,129.349,102.066)
C5': (50.042,126.715,103.511)
O4': (48.629,128.635,103.144)
C8: (50.079,130.859,102.268)
O2': (46.718,127.774,100.856)
C6: (49.243,133.825,100.591)
C5: (49.429,132.589,101.224)
C4: (48.379,131.697,101.173)
P: (52.516,127.295,104.190)
C4': (48.879,127.267,102.729)
C2': (47.986,128.398,100.865)
C2: (47.135,133.085,100.016)
N1: (48.059,134.042,99.978)
N3: (47.190,131.890,100.581)
N6: (50.168,134.791,100.563)
N7: (50.499,132.050,101.923)
N9: (48.807,130.577,101.847)
O5': (51.182,127.571,103.373)
O3': (48.788,126.146,100.598)
OP1: (51.658,145.750,99.339)
OP2: (53.340,143.836,99.315)
C3': (49.181,142.465,99.354)
C1': (50.216,140.560,100.295)
C5': (51.312,142.354,97.956)
O4': (50.285,140.458,98.890)
C8: (52.720,140.758,100.617)
O2': (49.023,142.069,101.766)
C6: (53.599,138.241,102.882)
C5: (53.099,139.182,101.983)
C4: (51.752,139.129,101.705)
P: (52.347,144.675,98.610)
C4': (49.989,141.736,98.291)
C2': (49.869,142.009,100.632)
C2: (51.451,137.409,103.030)
N1: (52.733,137.345,103.399)
N3: (50.860,138.253,102.200)
N6: (54.880,138.187,103.254)
N7: (53.704,140.211,101.282)
N9: (51.511,140.166,100.838)
O5': (51.204,143.771,97.969)
O3': (47.843,141.986,99.363)
OP2: (53.340,143.836,99.315)
C3': (49.181,142.465,99.354)
C1': (50.216,140.560,100.295)
C5': (51.312,142.354,97.956)
O4': (50.285,140.458,98.890)
C8: (52.720,140.758,100.617)
O2': (49.023,142.069,101.766)
C6: (53.599,138.241,102.882)
C5: (53.099,139.182,101.983)
C4: (51.752,139.129,101.705)
P: (52.347,144.675,98.610)
C4': (49.989,141.736,98.291)
C2': (49.869,142.009,100.632)
C2: (51.451,137.409,103.030)
N1: (52.733,137.345,103.399)
N3: (50.860,138.253,102.200)
N6: (54.880,138.187,103.254)
N7: (53.704,140.211,101.282)
N9: (51.511,140.166,100.838)
O5': (51.204,143.771,97.969)
O3': (47.843,141.986,99.363)
Image (generated by PyMOL):