Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3KNK:A2424:A2423
Extra
PDB:
ATOM 1 O3' A A2423 55.079 -87.851 143.007 1.00 87.67 O
ATOM 2 P U A2424 55.359 -86.285 142.780 1.00 94.97 P
ATOM 3 OP1 U A2424 54.717 -85.507 143.867 1.00 82.50 O
ATOM 4 OP2 U A2424 55.015 -85.993 141.368 1.00 85.87 O
ATOM 5 O5' U A2424 56.932 -86.112 142.921 1.00 85.87 O
ATOM 6 C5' U A2424 57.600 -86.387 144.152 1.00 85.47 C
ATOM 7 C4' U A2424 58.446 -85.210 144.557 1.00 80.64 C
ATOM 8 O4' U A2424 59.269 -84.832 143.423 1.00 81.75 O
ATOM 9 C3' U A2424 57.648 -83.975 144.947 1.00 83.87 C
ATOM 10 O3' U A2424 58.339 -83.297 145.990 1.00 83.94 O
ATOM 11 C2' U A2424 57.627 -83.157 143.659 1.00 84.20 C
ATOM 12 O2' U A2424 57.489 -81.767 143.875 1.00 86.31 O
ATOM 13 C1' U A2424 58.978 -83.513 143.035 1.00 83.43 C
ATOM 14 N1 U A2424 59.012 -83.473 141.563 1.00 84.49 N
ATOM 15 C2 U A2424 60.143 -82.943 140.948 1.00 86.45 C
ATOM 16 O2 U A2424 61.120 -82.536 141.567 1.00 88.25 O
ATOM 17 N3 U A2424 60.091 -82.914 139.574 1.00 83.28 N
ATOM 18 C4 U A2424 59.051 -83.349 138.765 1.00 79.25 C
ATOM 19 O4 U A2424 59.118 -83.192 137.540 1.00 79.14 O
ATOM 20 C5 U A2424 57.941 -83.902 139.471 1.00 83.53 C
ATOM 21 C6 U A2424 57.956 -83.943 140.809 1.00 84.44 C
ATOM 22 P C A2425 58.243 -83.852 147.497 1.00 82.36 P
ATOM 23 OP1 C A2425 57.769 -85.262 147.487 1.00 78.96 O
ATOM 24 OP2 C A2425 57.514 -82.832 148.293 1.00 81.83 O
ATOM 25 O5' C A2425 59.758 -83.878 147.979 1.00 81.51 O
TER
ATOM 1 O3' C B2422 54.987 -88.705 137.238 1.00 82.41 O
ATOM 2 P A B2423 54.344 -87.276 137.657 1.00 85.45 P
ATOM 3 OP1 A B2423 53.057 -87.138 136.934 1.00 77.05 O
ATOM 4 OP2 A B2423 55.371 -86.199 137.528 1.00 75.36 O
ATOM 5 O5' A B2423 54.002 -87.492 139.200 1.00 89.66 O
ATOM 6 C5' A B2423 53.747 -88.809 139.708 1.00 83.27 C
ATOM 7 C4' A B2423 53.781 -88.826 141.224 1.00 81.55 C
ATOM 8 O4' A B2423 53.167 -90.043 141.700 1.00 84.54 O
ATOM 9 C3' A B2423 55.151 -88.738 141.902 1.00 82.09 C
ATOM 10 O3' A B2423 55.079 -87.851 143.007 1.00 87.67 O
ATOM 11 C2' A B2423 55.484 -90.181 142.322 1.00 77.42 C
ATOM 12 O2' A B2423 55.969 -90.316 143.646 1.00 77.36 O
ATOM 13 C1' A B2423 54.150 -90.909 142.226 1.00 79.57 C
ATOM 14 N9 A B2423 54.227 -92.088 141.359 1.00 73.76 N
ATOM 15 C8 A B2423 54.530 -92.169 140.014 1.00 76.31 C
ATOM 16 N7 A B2423 54.466 -93.387 139.536 1.00 74.85 N
ATOM 17 C5 A B2423 54.114 -94.160 140.635 1.00 70.71 C
ATOM 18 C6 A B2423 53.880 -95.532 140.793 1.00 67.93 C
ATOM 19 N6 A B2423 53.982 -96.423 139.801 1.00 71.17 N
ATOM 20 N1 A B2423 53.533 -95.969 142.021 1.00 68.60 N
ATOM 21 C2 A B2423 53.439 -95.078 143.018 1.00 71.28 C
ATOM 22 N3 A B2423 53.639 -93.770 142.998 1.00 67.94 N
ATOM 23 C4 A B2423 53.976 -93.370 141.763 1.00 69.22 C
ATOM 24 P U B2424 55.359 -86.285 142.780 1.00 94.97 P
ATOM 25 OP1 U B2424 54.717 -85.507 143.867 1.00 82.50 O
ATOM 26 OP2 U B2424 55.015 -85.993 141.368 1.00 85.87 O
ATOM 27 O5' U B2424 56.932 -86.112 142.921 1.00 85.87 O
TER
ATOM 2 P U A2424 55.359 -86.285 142.780 1.00 94.97 P
ATOM 3 OP1 U A2424 54.717 -85.507 143.867 1.00 82.50 O
ATOM 4 OP2 U A2424 55.015 -85.993 141.368 1.00 85.87 O
ATOM 5 O5' U A2424 56.932 -86.112 142.921 1.00 85.87 O
ATOM 6 C5' U A2424 57.600 -86.387 144.152 1.00 85.47 C
ATOM 7 C4' U A2424 58.446 -85.210 144.557 1.00 80.64 C
ATOM 8 O4' U A2424 59.269 -84.832 143.423 1.00 81.75 O
ATOM 9 C3' U A2424 57.648 -83.975 144.947 1.00 83.87 C
ATOM 10 O3' U A2424 58.339 -83.297 145.990 1.00 83.94 O
ATOM 11 C2' U A2424 57.627 -83.157 143.659 1.00 84.20 C
ATOM 12 O2' U A2424 57.489 -81.767 143.875 1.00 86.31 O
ATOM 13 C1' U A2424 58.978 -83.513 143.035 1.00 83.43 C
ATOM 14 N1 U A2424 59.012 -83.473 141.563 1.00 84.49 N
ATOM 15 C2 U A2424 60.143 -82.943 140.948 1.00 86.45 C
ATOM 16 O2 U A2424 61.120 -82.536 141.567 1.00 88.25 O
ATOM 17 N3 U A2424 60.091 -82.914 139.574 1.00 83.28 N
ATOM 18 C4 U A2424 59.051 -83.349 138.765 1.00 79.25 C
ATOM 19 O4 U A2424 59.118 -83.192 137.540 1.00 79.14 O
ATOM 20 C5 U A2424 57.941 -83.902 139.471 1.00 83.53 C
ATOM 21 C6 U A2424 57.956 -83.943 140.809 1.00 84.44 C
ATOM 22 P C A2425 58.243 -83.852 147.497 1.00 82.36 P
ATOM 23 OP1 C A2425 57.769 -85.262 147.487 1.00 78.96 O
ATOM 24 OP2 C A2425 57.514 -82.832 148.293 1.00 81.83 O
ATOM 25 O5' C A2425 59.758 -83.878 147.979 1.00 81.51 O
TER
ATOM 1 O3' C B2422 54.987 -88.705 137.238 1.00 82.41 O
ATOM 2 P A B2423 54.344 -87.276 137.657 1.00 85.45 P
ATOM 3 OP1 A B2423 53.057 -87.138 136.934 1.00 77.05 O
ATOM 4 OP2 A B2423 55.371 -86.199 137.528 1.00 75.36 O
ATOM 5 O5' A B2423 54.002 -87.492 139.200 1.00 89.66 O
ATOM 6 C5' A B2423 53.747 -88.809 139.708 1.00 83.27 C
ATOM 7 C4' A B2423 53.781 -88.826 141.224 1.00 81.55 C
ATOM 8 O4' A B2423 53.167 -90.043 141.700 1.00 84.54 O
ATOM 9 C3' A B2423 55.151 -88.738 141.902 1.00 82.09 C
ATOM 10 O3' A B2423 55.079 -87.851 143.007 1.00 87.67 O
ATOM 11 C2' A B2423 55.484 -90.181 142.322 1.00 77.42 C
ATOM 12 O2' A B2423 55.969 -90.316 143.646 1.00 77.36 O
ATOM 13 C1' A B2423 54.150 -90.909 142.226 1.00 79.57 C
ATOM 14 N9 A B2423 54.227 -92.088 141.359 1.00 73.76 N
ATOM 15 C8 A B2423 54.530 -92.169 140.014 1.00 76.31 C
ATOM 16 N7 A B2423 54.466 -93.387 139.536 1.00 74.85 N
ATOM 17 C5 A B2423 54.114 -94.160 140.635 1.00 70.71 C
ATOM 18 C6 A B2423 53.880 -95.532 140.793 1.00 67.93 C
ATOM 19 N6 A B2423 53.982 -96.423 139.801 1.00 71.17 N
ATOM 20 N1 A B2423 53.533 -95.969 142.021 1.00 68.60 N
ATOM 21 C2 A B2423 53.439 -95.078 143.018 1.00 71.28 C
ATOM 22 N3 A B2423 53.639 -93.770 142.998 1.00 67.94 N
ATOM 23 C4 A B2423 53.976 -93.370 141.763 1.00 69.22 C
ATOM 24 P U B2424 55.359 -86.285 142.780 1.00 94.97 P
ATOM 25 OP1 U B2424 54.717 -85.507 143.867 1.00 82.50 O
ATOM 26 OP2 U B2424 55.015 -85.993 141.368 1.00 85.87 O
ATOM 27 O5' U B2424 56.932 -86.112 142.921 1.00 85.87 O
TER
Atoms:
C4: (59.051,-83.349,138.765)
N3: (60.091,-82.914,139.574)
OP1: (54.717,-85.507,143.867)
OP2: (55.015,-85.993,141.368)
C2: (60.143,-82.943,140.948)
C1': (58.978,-83.513,143.035)
C3': (57.648,-83.975,144.947)
O5': (56.932,-86.112,142.921)
O4': (59.269,-84.832,143.423)
C5': (57.600,-86.387,144.152)
P: (55.359,-86.285,142.780)
C4': (58.446,-85.210,144.557)
C2': (57.627,-83.157,143.659)
O2': (57.489,-81.767,143.875)
N1: (59.012,-83.473,141.563)
O4: (59.118,-83.192,137.540)
O2: (61.120,-82.536,141.567)
C6: (57.956,-83.943,140.809)
C5: (57.941,-83.902,139.471)
O3': (58.339,-83.297,145.990)
N3: (60.091,-82.914,139.574)
OP1: (54.717,-85.507,143.867)
OP2: (55.015,-85.993,141.368)
C2: (60.143,-82.943,140.948)
C1': (58.978,-83.513,143.035)
C3': (57.648,-83.975,144.947)
O5': (56.932,-86.112,142.921)
O4': (59.269,-84.832,143.423)
C5': (57.600,-86.387,144.152)
P: (55.359,-86.285,142.780)
C4': (58.446,-85.210,144.557)
C2': (57.627,-83.157,143.659)
O2': (57.489,-81.767,143.875)
N1: (59.012,-83.473,141.563)
O4: (59.118,-83.192,137.540)
O2: (61.120,-82.536,141.567)
C6: (57.956,-83.943,140.809)
C5: (57.941,-83.902,139.471)
O3': (58.339,-83.297,145.990)
OP1: (53.057,-87.138,136.934)
OP2: (55.371,-86.199,137.528)
C3': (55.151,-88.738,141.902)
C1': (54.150,-90.909,142.226)
C5': (53.747,-88.809,139.708)
O4': (53.167,-90.043,141.700)
C8: (54.530,-92.169,140.014)
O2': (55.969,-90.316,143.646)
C6: (53.880,-95.532,140.793)
C5: (54.114,-94.160,140.635)
C4: (53.976,-93.370,141.763)
P: (54.344,-87.276,137.657)
C4': (53.781,-88.826,141.224)
C2': (55.484,-90.181,142.322)
C2: (53.439,-95.078,143.018)
N1: (53.533,-95.969,142.021)
N3: (53.639,-93.770,142.998)
N6: (53.982,-96.423,139.801)
N7: (54.466,-93.387,139.536)
N9: (54.227,-92.088,141.359)
O5': (54.002,-87.492,139.200)
O3': (55.079,-87.851,143.007)
OP2: (55.371,-86.199,137.528)
C3': (55.151,-88.738,141.902)
C1': (54.150,-90.909,142.226)
C5': (53.747,-88.809,139.708)
O4': (53.167,-90.043,141.700)
C8: (54.530,-92.169,140.014)
O2': (55.969,-90.316,143.646)
C6: (53.880,-95.532,140.793)
C5: (54.114,-94.160,140.635)
C4: (53.976,-93.370,141.763)
P: (54.344,-87.276,137.657)
C4': (53.781,-88.826,141.224)
C2': (55.484,-90.181,142.322)
C2: (53.439,-95.078,143.018)
N1: (53.533,-95.969,142.021)
N3: (53.639,-93.770,142.998)
N6: (53.982,-96.423,139.801)
N7: (54.466,-93.387,139.536)
N9: (54.227,-92.088,141.359)
O5': (54.002,-87.492,139.200)
O3': (55.079,-87.851,143.007)
Image (generated by PyMOL):