Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3I56:02041:02490
Extra
PDB:
ATOM 1 O3' G A2040 52.139 128.242 106.252 1.00 21.23 O
ATOM 2 P A A2041 52.598 128.154 104.717 1.00 21.51 P
ATOM 3 OP1 A A2041 53.062 126.778 104.451 1.00 20.37 O
ATOM 4 OP2 A A2041 53.505 129.295 104.456 1.00 22.06 O
ATOM 5 O5' A A2041 51.253 128.397 103.904 1.00 20.29 O
ATOM 6 C5' A A2041 50.125 127.529 104.068 1.00 20.83 C
ATOM 7 C4' A A2041 48.950 128.048 103.274 1.00 22.20 C
ATOM 8 O4' A A2041 48.685 129.417 103.675 1.00 23.99 O
ATOM 9 C3' A A2041 49.115 128.146 101.764 1.00 21.83 C
ATOM 10 O3' A A2041 48.840 126.899 101.134 1.00 20.85 O
ATOM 11 C2' A A2041 48.050 129.172 101.399 1.00 23.35 C
ATOM 12 O2' A A2041 46.748 128.617 101.403 1.00 24.89 O
ATOM 13 C1' A A2041 48.142 130.137 102.581 1.00 23.28 C
ATOM 14 N9 A A2041 48.951 131.336 102.353 1.00 21.72 N
ATOM 15 C8 A A2041 50.244 131.570 102.739 1.00 22.81 C
ATOM 16 N7 A A2041 50.683 132.762 102.424 1.00 22.40 N
ATOM 17 C5 A A2041 49.610 133.349 101.776 1.00 21.40 C
ATOM 18 C6 A A2041 49.437 134.611 101.198 1.00 21.31 C
ATOM 19 N6 A A2041 50.382 135.554 101.187 1.00 20.65 N
ATOM 20 N1 A A2041 48.244 134.880 100.626 1.00 21.25 N
ATOM 21 C2 A A2041 47.300 133.936 100.641 1.00 19.99 C
ATOM 22 N3 A A2041 47.342 132.718 101.155 1.00 20.44 N
ATOM 23 C4 A A2041 48.540 132.481 101.715 1.00 21.04 C
ATOM 24 P A A2042 49.635 126.481 99.803 1.00 21.75 P
ATOM 25 OP1 A A2042 49.660 127.642 98.876 1.00 21.53 O
ATOM 26 OP2 A A2042 49.048 125.201 99.348 1.00 22.09 O
ATOM 27 O5' A A2042 51.114 126.185 100.314 1.00 17.98 O
TER
ATOM 1 O3' U B2489 53.116 145.952 97.743 1.00 22.57 O
ATOM 2 P A B2490 52.579 145.497 99.178 1.00 25.08 P
ATOM 3 OP1 A B2490 52.258 146.722 99.922 1.00 27.25 O
ATOM 4 OP2 A B2490 53.514 144.511 99.759 1.00 27.28 O
ATOM 5 O5' A B2490 51.217 144.751 98.872 1.00 25.20 O
ATOM 6 C5' A B2490 51.177 143.595 98.030 1.00 25.97 C
ATOM 7 C4' A B2490 50.188 142.613 98.578 1.00 27.36 C
ATOM 8 O4' A B2490 50.914 141.497 99.141 1.00 29.01 O
ATOM 9 C3' A B2490 49.304 143.165 99.691 1.00 29.49 C
ATOM 10 O3' A B2490 48.000 142.618 99.621 1.00 28.37 O
ATOM 11 C2' A B2490 50.031 142.701 100.950 1.00 30.79 C
ATOM 12 O2' A B2490 49.186 142.533 102.072 1.00 33.70 O
ATOM 13 C1' A B2490 50.591 141.357 100.507 1.00 29.78 C
ATOM 14 N9 A B2490 51.812 140.997 101.217 1.00 30.32 N
ATOM 15 C8 A B2490 53.041 141.597 101.123 1.00 31.14 C
ATOM 16 N7 A B2490 53.959 141.038 101.869 1.00 31.74 N
ATOM 17 C5 A B2490 53.288 140.005 102.504 1.00 31.74 C
ATOM 18 C6 A B2490 53.702 139.048 103.438 1.00 32.17 C
ATOM 19 N6 A B2490 54.947 138.973 103.916 1.00 33.97 N
ATOM 20 N1 A B2490 52.785 138.162 103.877 1.00 31.47 N
ATOM 21 C2 A B2490 51.539 138.244 103.406 1.00 30.98 C
ATOM 22 N3 A B2490 51.027 139.100 102.530 1.00 31.51 N
ATOM 23 C4 A B2490 51.965 139.968 102.113 1.00 31.14 C
ATOM 24 P U B2491 46.796 143.503 99.024 1.00 28.92 P
ATOM 25 OP1 U B2491 47.393 144.652 98.293 1.00 25.98 O
ATOM 26 OP2 U B2491 45.806 143.748 100.106 1.00 26.52 O
ATOM 27 O5' U B2491 46.157 142.506 97.955 1.00 28.48 O
TER
ATOM 2 P A A2041 52.598 128.154 104.717 1.00 21.51 P
ATOM 3 OP1 A A2041 53.062 126.778 104.451 1.00 20.37 O
ATOM 4 OP2 A A2041 53.505 129.295 104.456 1.00 22.06 O
ATOM 5 O5' A A2041 51.253 128.397 103.904 1.00 20.29 O
ATOM 6 C5' A A2041 50.125 127.529 104.068 1.00 20.83 C
ATOM 7 C4' A A2041 48.950 128.048 103.274 1.00 22.20 C
ATOM 8 O4' A A2041 48.685 129.417 103.675 1.00 23.99 O
ATOM 9 C3' A A2041 49.115 128.146 101.764 1.00 21.83 C
ATOM 10 O3' A A2041 48.840 126.899 101.134 1.00 20.85 O
ATOM 11 C2' A A2041 48.050 129.172 101.399 1.00 23.35 C
ATOM 12 O2' A A2041 46.748 128.617 101.403 1.00 24.89 O
ATOM 13 C1' A A2041 48.142 130.137 102.581 1.00 23.28 C
ATOM 14 N9 A A2041 48.951 131.336 102.353 1.00 21.72 N
ATOM 15 C8 A A2041 50.244 131.570 102.739 1.00 22.81 C
ATOM 16 N7 A A2041 50.683 132.762 102.424 1.00 22.40 N
ATOM 17 C5 A A2041 49.610 133.349 101.776 1.00 21.40 C
ATOM 18 C6 A A2041 49.437 134.611 101.198 1.00 21.31 C
ATOM 19 N6 A A2041 50.382 135.554 101.187 1.00 20.65 N
ATOM 20 N1 A A2041 48.244 134.880 100.626 1.00 21.25 N
ATOM 21 C2 A A2041 47.300 133.936 100.641 1.00 19.99 C
ATOM 22 N3 A A2041 47.342 132.718 101.155 1.00 20.44 N
ATOM 23 C4 A A2041 48.540 132.481 101.715 1.00 21.04 C
ATOM 24 P A A2042 49.635 126.481 99.803 1.00 21.75 P
ATOM 25 OP1 A A2042 49.660 127.642 98.876 1.00 21.53 O
ATOM 26 OP2 A A2042 49.048 125.201 99.348 1.00 22.09 O
ATOM 27 O5' A A2042 51.114 126.185 100.314 1.00 17.98 O
TER
ATOM 1 O3' U B2489 53.116 145.952 97.743 1.00 22.57 O
ATOM 2 P A B2490 52.579 145.497 99.178 1.00 25.08 P
ATOM 3 OP1 A B2490 52.258 146.722 99.922 1.00 27.25 O
ATOM 4 OP2 A B2490 53.514 144.511 99.759 1.00 27.28 O
ATOM 5 O5' A B2490 51.217 144.751 98.872 1.00 25.20 O
ATOM 6 C5' A B2490 51.177 143.595 98.030 1.00 25.97 C
ATOM 7 C4' A B2490 50.188 142.613 98.578 1.00 27.36 C
ATOM 8 O4' A B2490 50.914 141.497 99.141 1.00 29.01 O
ATOM 9 C3' A B2490 49.304 143.165 99.691 1.00 29.49 C
ATOM 10 O3' A B2490 48.000 142.618 99.621 1.00 28.37 O
ATOM 11 C2' A B2490 50.031 142.701 100.950 1.00 30.79 C
ATOM 12 O2' A B2490 49.186 142.533 102.072 1.00 33.70 O
ATOM 13 C1' A B2490 50.591 141.357 100.507 1.00 29.78 C
ATOM 14 N9 A B2490 51.812 140.997 101.217 1.00 30.32 N
ATOM 15 C8 A B2490 53.041 141.597 101.123 1.00 31.14 C
ATOM 16 N7 A B2490 53.959 141.038 101.869 1.00 31.74 N
ATOM 17 C5 A B2490 53.288 140.005 102.504 1.00 31.74 C
ATOM 18 C6 A B2490 53.702 139.048 103.438 1.00 32.17 C
ATOM 19 N6 A B2490 54.947 138.973 103.916 1.00 33.97 N
ATOM 20 N1 A B2490 52.785 138.162 103.877 1.00 31.47 N
ATOM 21 C2 A B2490 51.539 138.244 103.406 1.00 30.98 C
ATOM 22 N3 A B2490 51.027 139.100 102.530 1.00 31.51 N
ATOM 23 C4 A B2490 51.965 139.968 102.113 1.00 31.14 C
ATOM 24 P U B2491 46.796 143.503 99.024 1.00 28.92 P
ATOM 25 OP1 U B2491 47.393 144.652 98.293 1.00 25.98 O
ATOM 26 OP2 U B2491 45.806 143.748 100.106 1.00 26.52 O
ATOM 27 O5' U B2491 46.157 142.506 97.955 1.00 28.48 O
TER
Atoms:
OP1: (53.062,126.778,104.451)
OP2: (53.505,129.295,104.456)
C3': (49.115,128.146,101.764)
C1': (48.142,130.137,102.581)
C5': (50.125,127.529,104.068)
O4': (48.685,129.417,103.675)
C8: (50.244,131.570,102.739)
O2': (46.748,128.617,101.403)
C6: (49.437,134.611,101.198)
C5: (49.610,133.349,101.776)
C4: (48.540,132.481,101.715)
P: (52.598,128.154,104.717)
C4': (48.950,128.048,103.274)
C2': (48.050,129.172,101.399)
C2: (47.300,133.936,100.641)
N1: (48.244,134.880,100.626)
N3: (47.342,132.718,101.155)
N6: (50.382,135.554,101.187)
N7: (50.683,132.762,102.424)
N9: (48.951,131.336,102.353)
O5': (51.253,128.397,103.904)
O3': (48.840,126.899,101.134)
OP2: (53.505,129.295,104.456)
C3': (49.115,128.146,101.764)
C1': (48.142,130.137,102.581)
C5': (50.125,127.529,104.068)
O4': (48.685,129.417,103.675)
C8: (50.244,131.570,102.739)
O2': (46.748,128.617,101.403)
C6: (49.437,134.611,101.198)
C5: (49.610,133.349,101.776)
C4: (48.540,132.481,101.715)
P: (52.598,128.154,104.717)
C4': (48.950,128.048,103.274)
C2': (48.050,129.172,101.399)
C2: (47.300,133.936,100.641)
N1: (48.244,134.880,100.626)
N3: (47.342,132.718,101.155)
N6: (50.382,135.554,101.187)
N7: (50.683,132.762,102.424)
N9: (48.951,131.336,102.353)
O5': (51.253,128.397,103.904)
O3': (48.840,126.899,101.134)
OP1: (52.258,146.722,99.922)
OP2: (53.514,144.511,99.759)
C3': (49.304,143.165,99.691)
C1': (50.591,141.357,100.507)
C5': (51.177,143.595,98.030)
O4': (50.914,141.497,99.141)
C8: (53.041,141.597,101.123)
O2': (49.186,142.533,102.072)
C6: (53.702,139.048,103.438)
C5: (53.288,140.005,102.504)
C4: (51.965,139.968,102.113)
P: (52.579,145.497,99.178)
C4': (50.188,142.613,98.578)
C2': (50.031,142.701,100.950)
C2: (51.539,138.244,103.406)
N1: (52.785,138.162,103.877)
N3: (51.027,139.100,102.530)
N6: (54.947,138.973,103.916)
N7: (53.959,141.038,101.869)
N9: (51.812,140.997,101.217)
O5': (51.217,144.751,98.872)
O3': (48.000,142.618,99.621)
OP2: (53.514,144.511,99.759)
C3': (49.304,143.165,99.691)
C1': (50.591,141.357,100.507)
C5': (51.177,143.595,98.030)
O4': (50.914,141.497,99.141)
C8: (53.041,141.597,101.123)
O2': (49.186,142.533,102.072)
C6: (53.702,139.048,103.438)
C5: (53.288,140.005,102.504)
C4: (51.965,139.968,102.113)
P: (52.579,145.497,99.178)
C4': (50.188,142.613,98.578)
C2': (50.031,142.701,100.950)
C2: (51.539,138.244,103.406)
N1: (52.785,138.162,103.877)
N3: (51.027,139.100,102.530)
N6: (54.947,138.973,103.916)
N7: (53.959,141.038,101.869)
N9: (51.812,140.997,101.217)
O5': (51.217,144.751,98.872)
O3': (48.000,142.618,99.621)
Image (generated by PyMOL):