Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A2047:A2607
Extra
PDB:
ATOM 1 O3' G A2046 -72.321 -71.815 -6.434 1.00 0.01 O
ATOM 2 P A A2047 -71.680 -71.493 -5.007 1.00 0.01 P
ATOM 3 OP1 A A2047 -72.763 -70.974 -4.155 1.00 0.01 O
ATOM 4 OP2 A A2047 -70.498 -70.670 -5.243 1.00 0.01 O
ATOM 5 O5' A A2047 -71.230 -72.911 -4.510 1.00 0.01 O
ATOM 6 C5' A A2047 -72.185 -73.835 -4.080 1.00 0.01 C
ATOM 7 C4' A A2047 -71.592 -75.189 -3.947 1.00 0.01 C
ATOM 8 O4' A A2047 -70.524 -75.342 -4.883 1.00 0.01 O
ATOM 9 C3' A A2047 -70.946 -75.493 -2.634 1.00 0.01 C
ATOM 10 O3' A A2047 -71.886 -75.788 -1.643 1.00 0.01 O
ATOM 11 C2' A A2047 -70.083 -76.666 -3.006 1.00 0.01 C
ATOM 12 O2' A A2047 -70.879 -77.810 -3.190 1.00 0.01 O
ATOM 13 C1' A A2047 -69.591 -76.234 -4.367 1.00 0.01 C
ATOM 14 N9 A A2047 -68.298 -75.556 -4.309 1.00 0.01 N
ATOM 15 C8 A A2047 -68.126 -74.284 -4.724 1.00 0.01 C
ATOM 16 N7 A A2047 -66.886 -73.894 -4.618 1.00 0.01 N
ATOM 17 C5 A A2047 -66.213 -74.980 -4.114 1.00 0.01 C
ATOM 18 C6 A A2047 -64.880 -75.139 -3.812 1.00 0.01 C
ATOM 19 N6 A A2047 -64.033 -74.140 -3.991 1.00 0.01 N
ATOM 20 N1 A A2047 -64.484 -76.323 -3.338 1.00 0.01 N
ATOM 21 C2 A A2047 -65.410 -77.255 -3.187 1.00 0.01 C
ATOM 22 N3 A A2047 -66.707 -77.209 -3.443 1.00 0.01 N
ATOM 23 C4 A A2047 -67.058 -76.025 -3.925 1.00 0.01 C
ATOM 24 P C A2048 -71.983 -74.897 -0.356 1.00 0.01 P
ATOM 25 OP1 C A2048 -70.670 -74.379 -0.110 1.00 0.01 O
ATOM 26 OP2 C A2048 -72.611 -75.705 0.661 1.00 0.01 O
ATOM 27 O5' C A2048 -72.940 -73.745 -0.799 1.00 0.01 O
TER
ATOM 1 O3' U B2606 -52.756 -71.365 -5.374 1.00 0.01 O
ATOM 2 P A B2607 -53.570 -72.002 -6.569 1.00 0.01 P
ATOM 3 OP1 A B2607 -52.801 -73.153 -7.041 1.00 0.01 O
ATOM 4 OP2 A B2607 -53.902 -70.931 -7.511 1.00 0.01 O
ATOM 5 O5' A B2607 -54.853 -72.486 -5.845 1.00 0.01 O
ATOM 6 C5' A B2607 -54.774 -73.534 -4.924 1.00 0.01 C
ATOM 7 C4' A B2607 -55.971 -74.414 -5.019 1.00 0.01 C
ATOM 8 O4' A B2607 -57.148 -73.584 -5.045 1.00 0.01 O
ATOM 9 C3' A B2607 -56.030 -75.291 -6.245 1.00 0.01 C
ATOM 10 O3' A B2607 -56.575 -76.535 -5.886 1.00 0.01 O
ATOM 11 C2' A B2607 -57.005 -74.578 -7.149 1.00 0.01 C
ATOM 12 O2' A B2607 -57.730 -75.450 -7.982 1.00 0.01 O
ATOM 13 C1' A B2607 -57.925 -73.883 -6.155 1.00 0.01 C
ATOM 14 N9 A B2607 -58.479 -72.636 -6.651 1.00 0.01 N
ATOM 15 C8 A B2607 -57.787 -71.527 -7.021 1.00 0.01 C
ATOM 16 N7 A B2607 -58.549 -70.566 -7.455 1.00 0.01 N
ATOM 17 C5 A B2607 -59.830 -71.102 -7.366 1.00 0.01 C
ATOM 18 C6 A B2607 -61.104 -70.613 -7.686 1.00 0.01 C
ATOM 19 N6 A B2607 -61.303 -69.392 -8.171 1.00 0.01 N
ATOM 20 N1 A B2607 -62.172 -71.384 -7.499 1.00 0.01 N
ATOM 21 C2 A B2607 -61.952 -72.571 -7.000 1.00 0.01 C
ATOM 22 N3 A B2607 -60.816 -73.139 -6.662 1.00 0.01 N
ATOM 23 C4 A B2607 -59.786 -72.358 -6.872 1.00 0.01 C
ATOM 24 P U B2608 -55.657 -77.827 -5.822 1.00 0.01 P
ATOM 25 OP1 U B2608 -54.616 -77.577 -4.828 1.00 0.01 O
ATOM 26 OP2 U B2608 -55.261 -78.146 -7.186 1.00 0.01 O
ATOM 27 O5' U B2608 -56.647 -78.920 -5.285 1.00 0.01 O
TER
ATOM 2 P A A2047 -71.680 -71.493 -5.007 1.00 0.01 P
ATOM 3 OP1 A A2047 -72.763 -70.974 -4.155 1.00 0.01 O
ATOM 4 OP2 A A2047 -70.498 -70.670 -5.243 1.00 0.01 O
ATOM 5 O5' A A2047 -71.230 -72.911 -4.510 1.00 0.01 O
ATOM 6 C5' A A2047 -72.185 -73.835 -4.080 1.00 0.01 C
ATOM 7 C4' A A2047 -71.592 -75.189 -3.947 1.00 0.01 C
ATOM 8 O4' A A2047 -70.524 -75.342 -4.883 1.00 0.01 O
ATOM 9 C3' A A2047 -70.946 -75.493 -2.634 1.00 0.01 C
ATOM 10 O3' A A2047 -71.886 -75.788 -1.643 1.00 0.01 O
ATOM 11 C2' A A2047 -70.083 -76.666 -3.006 1.00 0.01 C
ATOM 12 O2' A A2047 -70.879 -77.810 -3.190 1.00 0.01 O
ATOM 13 C1' A A2047 -69.591 -76.234 -4.367 1.00 0.01 C
ATOM 14 N9 A A2047 -68.298 -75.556 -4.309 1.00 0.01 N
ATOM 15 C8 A A2047 -68.126 -74.284 -4.724 1.00 0.01 C
ATOM 16 N7 A A2047 -66.886 -73.894 -4.618 1.00 0.01 N
ATOM 17 C5 A A2047 -66.213 -74.980 -4.114 1.00 0.01 C
ATOM 18 C6 A A2047 -64.880 -75.139 -3.812 1.00 0.01 C
ATOM 19 N6 A A2047 -64.033 -74.140 -3.991 1.00 0.01 N
ATOM 20 N1 A A2047 -64.484 -76.323 -3.338 1.00 0.01 N
ATOM 21 C2 A A2047 -65.410 -77.255 -3.187 1.00 0.01 C
ATOM 22 N3 A A2047 -66.707 -77.209 -3.443 1.00 0.01 N
ATOM 23 C4 A A2047 -67.058 -76.025 -3.925 1.00 0.01 C
ATOM 24 P C A2048 -71.983 -74.897 -0.356 1.00 0.01 P
ATOM 25 OP1 C A2048 -70.670 -74.379 -0.110 1.00 0.01 O
ATOM 26 OP2 C A2048 -72.611 -75.705 0.661 1.00 0.01 O
ATOM 27 O5' C A2048 -72.940 -73.745 -0.799 1.00 0.01 O
TER
ATOM 1 O3' U B2606 -52.756 -71.365 -5.374 1.00 0.01 O
ATOM 2 P A B2607 -53.570 -72.002 -6.569 1.00 0.01 P
ATOM 3 OP1 A B2607 -52.801 -73.153 -7.041 1.00 0.01 O
ATOM 4 OP2 A B2607 -53.902 -70.931 -7.511 1.00 0.01 O
ATOM 5 O5' A B2607 -54.853 -72.486 -5.845 1.00 0.01 O
ATOM 6 C5' A B2607 -54.774 -73.534 -4.924 1.00 0.01 C
ATOM 7 C4' A B2607 -55.971 -74.414 -5.019 1.00 0.01 C
ATOM 8 O4' A B2607 -57.148 -73.584 -5.045 1.00 0.01 O
ATOM 9 C3' A B2607 -56.030 -75.291 -6.245 1.00 0.01 C
ATOM 10 O3' A B2607 -56.575 -76.535 -5.886 1.00 0.01 O
ATOM 11 C2' A B2607 -57.005 -74.578 -7.149 1.00 0.01 C
ATOM 12 O2' A B2607 -57.730 -75.450 -7.982 1.00 0.01 O
ATOM 13 C1' A B2607 -57.925 -73.883 -6.155 1.00 0.01 C
ATOM 14 N9 A B2607 -58.479 -72.636 -6.651 1.00 0.01 N
ATOM 15 C8 A B2607 -57.787 -71.527 -7.021 1.00 0.01 C
ATOM 16 N7 A B2607 -58.549 -70.566 -7.455 1.00 0.01 N
ATOM 17 C5 A B2607 -59.830 -71.102 -7.366 1.00 0.01 C
ATOM 18 C6 A B2607 -61.104 -70.613 -7.686 1.00 0.01 C
ATOM 19 N6 A B2607 -61.303 -69.392 -8.171 1.00 0.01 N
ATOM 20 N1 A B2607 -62.172 -71.384 -7.499 1.00 0.01 N
ATOM 21 C2 A B2607 -61.952 -72.571 -7.000 1.00 0.01 C
ATOM 22 N3 A B2607 -60.816 -73.139 -6.662 1.00 0.01 N
ATOM 23 C4 A B2607 -59.786 -72.358 -6.872 1.00 0.01 C
ATOM 24 P U B2608 -55.657 -77.827 -5.822 1.00 0.01 P
ATOM 25 OP1 U B2608 -54.616 -77.577 -4.828 1.00 0.01 O
ATOM 26 OP2 U B2608 -55.261 -78.146 -7.186 1.00 0.01 O
ATOM 27 O5' U B2608 -56.647 -78.920 -5.285 1.00 0.01 O
TER
Atoms:
OP1: (-72.763,-70.974,-4.155)
OP2: (-70.498,-70.670,-5.243)
C3': (-70.946,-75.493,-2.634)
C1': (-69.591,-76.234,-4.367)
C5': (-72.185,-73.835,-4.080)
O4': (-70.524,-75.342,-4.883)
C8: (-68.126,-74.284,-4.724)
O2': (-70.879,-77.810,-3.190)
C6: (-64.880,-75.139,-3.812)
C5: (-66.213,-74.980,-4.114)
C4: (-67.058,-76.025,-3.925)
P: (-71.680,-71.493,-5.007)
C4': (-71.592,-75.189,-3.947)
C2': (-70.083,-76.666,-3.006)
C2: (-65.410,-77.255,-3.187)
N1: (-64.484,-76.323,-3.338)
N3: (-66.707,-77.209,-3.443)
N6: (-64.033,-74.140,-3.991)
N7: (-66.886,-73.894,-4.618)
N9: (-68.298,-75.556,-4.309)
O5': (-71.230,-72.911,-4.510)
O3': (-71.886,-75.788,-1.643)
OP2: (-70.498,-70.670,-5.243)
C3': (-70.946,-75.493,-2.634)
C1': (-69.591,-76.234,-4.367)
C5': (-72.185,-73.835,-4.080)
O4': (-70.524,-75.342,-4.883)
C8: (-68.126,-74.284,-4.724)
O2': (-70.879,-77.810,-3.190)
C6: (-64.880,-75.139,-3.812)
C5: (-66.213,-74.980,-4.114)
C4: (-67.058,-76.025,-3.925)
P: (-71.680,-71.493,-5.007)
C4': (-71.592,-75.189,-3.947)
C2': (-70.083,-76.666,-3.006)
C2: (-65.410,-77.255,-3.187)
N1: (-64.484,-76.323,-3.338)
N3: (-66.707,-77.209,-3.443)
N6: (-64.033,-74.140,-3.991)
N7: (-66.886,-73.894,-4.618)
N9: (-68.298,-75.556,-4.309)
O5': (-71.230,-72.911,-4.510)
O3': (-71.886,-75.788,-1.643)
OP1: (-52.801,-73.153,-7.041)
OP2: (-53.902,-70.931,-7.511)
C3': (-56.030,-75.291,-6.245)
C1': (-57.925,-73.883,-6.155)
C5': (-54.774,-73.534,-4.924)
O4': (-57.148,-73.584,-5.045)
C8: (-57.787,-71.527,-7.021)
O2': (-57.730,-75.450,-7.982)
C6: (-61.104,-70.613,-7.686)
C5: (-59.830,-71.102,-7.366)
C4: (-59.786,-72.358,-6.872)
P: (-53.570,-72.002,-6.569)
C4': (-55.971,-74.414,-5.019)
C2': (-57.005,-74.578,-7.149)
C2: (-61.952,-72.571,-7.000)
N1: (-62.172,-71.384,-7.499)
N3: (-60.816,-73.139,-6.662)
N6: (-61.303,-69.392,-8.171)
N7: (-58.549,-70.566,-7.455)
N9: (-58.479,-72.636,-6.651)
O5': (-54.853,-72.486,-5.845)
O3': (-56.575,-76.535,-5.886)
OP2: (-53.902,-70.931,-7.511)
C3': (-56.030,-75.291,-6.245)
C1': (-57.925,-73.883,-6.155)
C5': (-54.774,-73.534,-4.924)
O4': (-57.148,-73.584,-5.045)
C8: (-57.787,-71.527,-7.021)
O2': (-57.730,-75.450,-7.982)
C6: (-61.104,-70.613,-7.686)
C5: (-59.830,-71.102,-7.366)
C4: (-59.786,-72.358,-6.872)
P: (-53.570,-72.002,-6.569)
C4': (-55.971,-74.414,-5.019)
C2': (-57.005,-74.578,-7.149)
C2: (-61.952,-72.571,-7.000)
N1: (-62.172,-71.384,-7.499)
N3: (-60.816,-73.139,-6.662)
N6: (-61.303,-69.392,-8.171)
N7: (-58.549,-70.566,-7.455)
N9: (-58.479,-72.636,-6.651)
O5': (-54.853,-72.486,-5.845)
O3': (-56.575,-76.535,-5.886)
Image (generated by PyMOL):