Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3OHJ:A1260:A1543
Extra
PDB:
ATOM 1 O3' G A1259 35.758 -58.700 -26.235 1.00 32.56 O
ATOM 2 P G A1260 35.154 -59.774 -27.272 1.00 37.22 P
ATOM 3 OP1 G A1260 36.283 -60.621 -27.722 1.00 34.52 O
ATOM 4 OP2 G A1260 34.364 -59.049 -28.301 1.00 28.95 O
ATOM 5 O5' G A1260 34.183 -60.610 -26.347 1.00 47.48 O
ATOM 6 C5' G A1260 33.576 -61.783 -26.827 1.00 44.17 C
ATOM 7 C4' G A1260 32.091 -61.784 -26.610 1.00 37.72 C
ATOM 8 O4' G A1260 31.595 -60.433 -26.384 1.00 33.70 O
ATOM 9 C3' G A1260 31.305 -62.325 -27.775 1.00 45.88 C
ATOM 10 O3' G A1260 30.243 -63.085 -27.282 1.00 40.25 O
ATOM 11 C2' G A1260 30.765 -61.079 -28.446 1.00 40.84 C
ATOM 12 O2' G A1260 29.601 -61.296 -29.205 1.00 50.57 O
ATOM 13 C1' G A1260 30.510 -60.191 -27.248 1.00 31.91 C
ATOM 14 N9 G A1260 30.457 -58.761 -27.562 1.00 36.04 N
ATOM 15 C8 G A1260 31.462 -57.858 -27.712 1.00 40.71 C
ATOM 16 N7 G A1260 31.048 -56.661 -27.997 1.00 43.62 N
ATOM 17 C5 G A1260 29.670 -56.758 -28.056 1.00 48.92 C
ATOM 18 C6 G A1260 28.654 -55.788 -28.322 1.00 51.12 C
ATOM 19 O6 G A1260 28.736 -54.583 -28.576 1.00 51.28 O
ATOM 20 N1 G A1260 27.389 -56.341 -28.259 1.00 53.26 N
ATOM 21 C2 G A1260 27.124 -57.662 -27.980 1.00 50.75 C
ATOM 22 N2 G A1260 25.842 -58.036 -27.962 1.00 57.31 N
ATOM 23 N3 G A1260 28.045 -58.571 -27.729 1.00 53.49 N
ATOM 24 C4 G A1260 29.297 -58.055 -27.785 1.00 51.62 C
ATOM 25 P U A1261 30.151 -64.603 -27.694 1.00 32.79 P
ATOM 26 OP1 U A1261 31.422 -65.248 -27.301 1.00 39.88 O
ATOM 27 OP2 U A1261 29.745 -64.621 -29.125 1.00 42.54 O
ATOM 28 O5' U A1261 28.983 -65.132 -26.781 1.00 40.65 O
TER
ATOM 1 O3' U B1542 19.072 -53.908 -24.538 1.00 35.15 O
ATOM 2 P A B1543 19.940 -54.451 -23.285 1.00 28.79 P
ATOM 3 OP1 A B1543 19.712 -53.506 -22.159 1.00 34.44 O
ATOM 4 OP2 A B1543 21.308 -54.643 -23.784 1.00 34.55 O
ATOM 5 O5' A B1543 19.289 -55.865 -22.929 1.00 29.03 O
ATOM 6 C5' A B1543 19.010 -56.814 -23.941 1.00 30.55 C
ATOM 7 C4' A B1543 18.871 -58.192 -23.377 1.00 25.51 C
ATOM 8 O4' A B1543 19.419 -59.130 -24.318 1.00 33.33 O
ATOM 9 C3' A B1543 19.616 -58.438 -22.076 1.00 27.69 C
ATOM 10 O3' A B1543 18.804 -58.273 -20.967 1.00 31.43 O
ATOM 11 C2' A B1543 20.125 -59.852 -22.194 1.00 35.42 C
ATOM 12 O2' A B1543 19.134 -60.779 -21.764 1.00 31.26 O
ATOM 13 C1' A B1543 20.330 -59.981 -23.694 1.00 34.05 C
ATOM 14 N9 A B1543 21.678 -59.552 -24.115 1.00 36.52 N
ATOM 15 C8 A B1543 21.993 -58.376 -24.764 1.00 32.59 C
ATOM 16 N7 A B1543 23.274 -58.279 -25.043 1.00 33.59 N
ATOM 17 C5 A B1543 23.817 -59.460 -24.564 1.00 32.12 C
ATOM 18 C6 A B1543 25.110 -59.981 -24.561 1.00 33.60 C
ATOM 19 N6 A B1543 26.170 -59.361 -25.077 1.00 39.36 N
ATOM 20 N1 A B1543 25.306 -61.176 -23.986 1.00 32.63 N
ATOM 21 C2 A B1543 24.269 -61.828 -23.466 1.00 33.88 C
ATOM 22 N3 A B1543 23.006 -61.454 -23.409 1.00 34.88 N
ATOM 23 C4 A B1543 22.850 -60.249 -23.984 1.00 34.97 C
ATOM 24 P C B1544 19.276 -57.357 -19.772 1.00 38.97 P
ATOM 25 OP1 C B1544 18.288 -57.525 -18.656 1.00 52.36 O
ATOM 26 OP2 C B1544 19.495 -56.014 -20.349 1.00 25.26 O
ATOM 27 O5' C B1544 20.641 -58.029 -19.366 1.00 38.72 O
TER
ATOM 2 P G A1260 35.154 -59.774 -27.272 1.00 37.22 P
ATOM 3 OP1 G A1260 36.283 -60.621 -27.722 1.00 34.52 O
ATOM 4 OP2 G A1260 34.364 -59.049 -28.301 1.00 28.95 O
ATOM 5 O5' G A1260 34.183 -60.610 -26.347 1.00 47.48 O
ATOM 6 C5' G A1260 33.576 -61.783 -26.827 1.00 44.17 C
ATOM 7 C4' G A1260 32.091 -61.784 -26.610 1.00 37.72 C
ATOM 8 O4' G A1260 31.595 -60.433 -26.384 1.00 33.70 O
ATOM 9 C3' G A1260 31.305 -62.325 -27.775 1.00 45.88 C
ATOM 10 O3' G A1260 30.243 -63.085 -27.282 1.00 40.25 O
ATOM 11 C2' G A1260 30.765 -61.079 -28.446 1.00 40.84 C
ATOM 12 O2' G A1260 29.601 -61.296 -29.205 1.00 50.57 O
ATOM 13 C1' G A1260 30.510 -60.191 -27.248 1.00 31.91 C
ATOM 14 N9 G A1260 30.457 -58.761 -27.562 1.00 36.04 N
ATOM 15 C8 G A1260 31.462 -57.858 -27.712 1.00 40.71 C
ATOM 16 N7 G A1260 31.048 -56.661 -27.997 1.00 43.62 N
ATOM 17 C5 G A1260 29.670 -56.758 -28.056 1.00 48.92 C
ATOM 18 C6 G A1260 28.654 -55.788 -28.322 1.00 51.12 C
ATOM 19 O6 G A1260 28.736 -54.583 -28.576 1.00 51.28 O
ATOM 20 N1 G A1260 27.389 -56.341 -28.259 1.00 53.26 N
ATOM 21 C2 G A1260 27.124 -57.662 -27.980 1.00 50.75 C
ATOM 22 N2 G A1260 25.842 -58.036 -27.962 1.00 57.31 N
ATOM 23 N3 G A1260 28.045 -58.571 -27.729 1.00 53.49 N
ATOM 24 C4 G A1260 29.297 -58.055 -27.785 1.00 51.62 C
ATOM 25 P U A1261 30.151 -64.603 -27.694 1.00 32.79 P
ATOM 26 OP1 U A1261 31.422 -65.248 -27.301 1.00 39.88 O
ATOM 27 OP2 U A1261 29.745 -64.621 -29.125 1.00 42.54 O
ATOM 28 O5' U A1261 28.983 -65.132 -26.781 1.00 40.65 O
TER
ATOM 1 O3' U B1542 19.072 -53.908 -24.538 1.00 35.15 O
ATOM 2 P A B1543 19.940 -54.451 -23.285 1.00 28.79 P
ATOM 3 OP1 A B1543 19.712 -53.506 -22.159 1.00 34.44 O
ATOM 4 OP2 A B1543 21.308 -54.643 -23.784 1.00 34.55 O
ATOM 5 O5' A B1543 19.289 -55.865 -22.929 1.00 29.03 O
ATOM 6 C5' A B1543 19.010 -56.814 -23.941 1.00 30.55 C
ATOM 7 C4' A B1543 18.871 -58.192 -23.377 1.00 25.51 C
ATOM 8 O4' A B1543 19.419 -59.130 -24.318 1.00 33.33 O
ATOM 9 C3' A B1543 19.616 -58.438 -22.076 1.00 27.69 C
ATOM 10 O3' A B1543 18.804 -58.273 -20.967 1.00 31.43 O
ATOM 11 C2' A B1543 20.125 -59.852 -22.194 1.00 35.42 C
ATOM 12 O2' A B1543 19.134 -60.779 -21.764 1.00 31.26 O
ATOM 13 C1' A B1543 20.330 -59.981 -23.694 1.00 34.05 C
ATOM 14 N9 A B1543 21.678 -59.552 -24.115 1.00 36.52 N
ATOM 15 C8 A B1543 21.993 -58.376 -24.764 1.00 32.59 C
ATOM 16 N7 A B1543 23.274 -58.279 -25.043 1.00 33.59 N
ATOM 17 C5 A B1543 23.817 -59.460 -24.564 1.00 32.12 C
ATOM 18 C6 A B1543 25.110 -59.981 -24.561 1.00 33.60 C
ATOM 19 N6 A B1543 26.170 -59.361 -25.077 1.00 39.36 N
ATOM 20 N1 A B1543 25.306 -61.176 -23.986 1.00 32.63 N
ATOM 21 C2 A B1543 24.269 -61.828 -23.466 1.00 33.88 C
ATOM 22 N3 A B1543 23.006 -61.454 -23.409 1.00 34.88 N
ATOM 23 C4 A B1543 22.850 -60.249 -23.984 1.00 34.97 C
ATOM 24 P C B1544 19.276 -57.357 -19.772 1.00 38.97 P
ATOM 25 OP1 C B1544 18.288 -57.525 -18.656 1.00 52.36 O
ATOM 26 OP2 C B1544 19.495 -56.014 -20.349 1.00 25.26 O
ATOM 27 O5' C B1544 20.641 -58.029 -19.366 1.00 38.72 O
TER
Atoms:
OP1: (36.283,-60.621,-27.722)
OP2: (34.364,-59.049,-28.301)
C3': (31.305,-62.325,-27.775)
C1': (30.510,-60.191,-27.248)
C5': (33.576,-61.783,-26.827)
O6: (28.736,-54.583,-28.576)
O4': (31.595,-60.433,-26.384)
C8: (31.462,-57.858,-27.712)
C2: (27.124,-57.662,-27.980)
C6: (28.654,-55.788,-28.322)
C5: (29.670,-56.758,-28.056)
C4: (29.297,-58.055,-27.785)
P: (35.154,-59.774,-27.272)
C4': (32.091,-61.784,-26.610)
C2': (30.765,-61.079,-28.446)
O2': (29.601,-61.296,-29.205)
N1: (27.389,-56.341,-28.259)
N2: (25.842,-58.036,-27.962)
N3: (28.045,-58.571,-27.729)
N7: (31.048,-56.661,-27.997)
N9: (30.457,-58.761,-27.562)
O5': (34.183,-60.610,-26.347)
O3': (30.243,-63.085,-27.282)
OP2: (34.364,-59.049,-28.301)
C3': (31.305,-62.325,-27.775)
C1': (30.510,-60.191,-27.248)
C5': (33.576,-61.783,-26.827)
O6: (28.736,-54.583,-28.576)
O4': (31.595,-60.433,-26.384)
C8: (31.462,-57.858,-27.712)
C2: (27.124,-57.662,-27.980)
C6: (28.654,-55.788,-28.322)
C5: (29.670,-56.758,-28.056)
C4: (29.297,-58.055,-27.785)
P: (35.154,-59.774,-27.272)
C4': (32.091,-61.784,-26.610)
C2': (30.765,-61.079,-28.446)
O2': (29.601,-61.296,-29.205)
N1: (27.389,-56.341,-28.259)
N2: (25.842,-58.036,-27.962)
N3: (28.045,-58.571,-27.729)
N7: (31.048,-56.661,-27.997)
N9: (30.457,-58.761,-27.562)
O5': (34.183,-60.610,-26.347)
O3': (30.243,-63.085,-27.282)
OP1: (19.712,-53.506,-22.159)
OP2: (21.308,-54.643,-23.784)
C3': (19.616,-58.438,-22.076)
C1': (20.330,-59.981,-23.694)
C5': (19.010,-56.814,-23.941)
O4': (19.419,-59.130,-24.318)
C8: (21.993,-58.376,-24.764)
O2': (19.134,-60.779,-21.764)
C6: (25.110,-59.981,-24.561)
C5: (23.817,-59.460,-24.564)
C4: (22.850,-60.249,-23.984)
P: (19.940,-54.451,-23.285)
C4': (18.871,-58.192,-23.377)
C2': (20.125,-59.852,-22.194)
C2: (24.269,-61.828,-23.466)
N1: (25.306,-61.176,-23.986)
N3: (23.006,-61.454,-23.409)
N6: (26.170,-59.361,-25.077)
N7: (23.274,-58.279,-25.043)
N9: (21.678,-59.552,-24.115)
O5': (19.289,-55.865,-22.929)
O3': (18.804,-58.273,-20.967)
OP2: (21.308,-54.643,-23.784)
C3': (19.616,-58.438,-22.076)
C1': (20.330,-59.981,-23.694)
C5': (19.010,-56.814,-23.941)
O4': (19.419,-59.130,-24.318)
C8: (21.993,-58.376,-24.764)
O2': (19.134,-60.779,-21.764)
C6: (25.110,-59.981,-24.561)
C5: (23.817,-59.460,-24.564)
C4: (22.850,-60.249,-23.984)
P: (19.940,-54.451,-23.285)
C4': (18.871,-58.192,-23.377)
C2': (20.125,-59.852,-22.194)
C2: (24.269,-61.828,-23.466)
N1: (25.306,-61.176,-23.986)
N3: (23.006,-61.454,-23.409)
N6: (26.170,-59.361,-25.077)
N7: (23.274,-58.279,-25.043)
N9: (21.678,-59.552,-24.115)
O5': (19.289,-55.865,-22.929)
O3': (18.804,-58.273,-20.967)
Image (generated by PyMOL):