Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A1433:A1432
Extra
PDB:
ATOM 1 O3' A A1432 -4.843 -32.902 6.219 1.00 0.56 O
ATOM 2 P U A1433 -3.911 -33.609 5.139 1.00 0.01 P
ATOM 3 OP1 U A1433 -3.830 -35.046 5.512 1.00 0.01 O
ATOM 4 OP2 U A1433 -2.667 -32.810 5.040 1.00 0.01 O
ATOM 5 O5' U A1433 -4.750 -33.453 3.825 1.00 0.01 O
ATOM 6 C5' U A1433 -6.062 -33.949 3.776 1.00 0.01 C
ATOM 7 C4' U A1433 -6.700 -33.606 2.482 1.00 0.01 C
ATOM 8 O4' U A1433 -7.056 -32.207 2.482 1.00 0.01 O
ATOM 9 C3' U A1433 -5.813 -33.774 1.260 1.00 0.01 C
ATOM 10 O3' U A1433 -5.755 -35.125 0.807 1.00 0.01 O
ATOM 11 C2' U A1433 -6.452 -32.819 0.276 1.00 0.01 C
ATOM 12 O2' U A1433 -7.624 -33.394 -0.287 1.00 0.01 O
ATOM 13 C1' U A1433 -6.874 -31.672 1.200 1.00 0.01 C
ATOM 14 N1 U A1433 -5.860 -30.602 1.284 1.00 0.01 N
ATOM 15 C2 U A1433 -5.890 -29.621 0.329 1.00 0.01 C
ATOM 16 O2 U A1433 -6.699 -29.637 -0.581 1.00 0.01 O
ATOM 17 N3 U A1433 -4.941 -28.639 0.454 1.00 0.01 N
ATOM 18 C4 U A1433 -3.989 -28.514 1.423 1.00 0.01 C
ATOM 19 O4 U A1433 -3.222 -27.569 1.372 1.00 0.01 O
ATOM 20 C5 U A1433 -4.014 -29.552 2.406 1.00 0.01 C
ATOM 21 C6 U A1433 -4.936 -30.536 2.304 1.00 0.01 C
ATOM 22 P G A1434 -4.642 -35.599 -0.264 1.00 0.01 P
ATOM 23 OP1 G A1434 -4.892 -37.038 -0.540 1.00 0.01 O
ATOM 24 OP2 G A1434 -3.309 -35.189 0.255 1.00 0.01 O
ATOM 25 O5' G A1434 -5.004 -34.747 -1.546 1.00 0.01 O
TER
ATOM 1 O3' U B1431 -2.479 -27.294 6.728 1.00 0.29 O
ATOM 2 P A B1432 -2.226 -28.445 5.659 1.00 0.56 P
ATOM 3 OP1 A B1432 -1.027 -29.182 6.099 1.00 0.56 O
ATOM 4 OP2 A B1432 -2.236 -27.833 4.328 1.00 0.56 O
ATOM 5 O5' A B1432 -3.496 -29.348 5.840 1.00 0.56 O
ATOM 6 C5' A B1432 -3.712 -30.037 7.052 1.00 0.56 C
ATOM 7 C4' A B1432 -5.080 -30.634 7.073 1.00 0.56 C
ATOM 8 O4' A B1432 -6.069 -29.586 6.872 1.00 0.56 O
ATOM 9 C3' A B1432 -5.352 -31.619 5.954 1.00 0.56 C
ATOM 10 O3' A B1432 -4.843 -32.902 6.219 1.00 0.56 O
ATOM 11 C2' A B1432 -6.866 -31.558 5.784 1.00 0.56 C
ATOM 12 O2' A B1432 -7.538 -32.365 6.741 1.00 0.56 O
ATOM 13 C1' A B1432 -7.138 -30.079 6.083 1.00 0.56 C
ATOM 14 N9 A B1432 -7.209 -29.288 4.848 1.00 0.47 N
ATOM 15 C8 A B1432 -6.287 -28.472 4.261 1.00 0.47 C
ATOM 16 N7 A B1432 -6.749 -27.956 3.143 1.00 0.47 N
ATOM 17 C5 A B1432 -8.027 -28.485 2.996 1.00 0.47 C
ATOM 18 C6 A B1432 -9.040 -28.345 2.051 1.00 0.47 C
ATOM 19 N6 A B1432 -8.967 -27.599 0.980 1.00 0.47 N
ATOM 20 N1 A B1432 -10.184 -29.007 2.221 1.00 0.47 N
ATOM 21 C2 A B1432 -10.314 -29.771 3.305 1.00 0.47 C
ATOM 22 N3 A B1432 -9.451 -29.991 4.274 1.00 0.47 N
ATOM 23 C4 A B1432 -8.317 -29.310 4.045 1.00 0.47 C
ATOM 24 P U B1433 -3.911 -33.609 5.139 1.00 0.01 P
ATOM 25 OP1 U B1433 -3.830 -35.046 5.512 1.00 0.01 O
ATOM 26 OP2 U B1433 -2.667 -32.810 5.040 1.00 0.01 O
ATOM 27 O5' U B1433 -4.750 -33.453 3.825 1.00 0.01 O
TER
ATOM 2 P U A1433 -3.911 -33.609 5.139 1.00 0.01 P
ATOM 3 OP1 U A1433 -3.830 -35.046 5.512 1.00 0.01 O
ATOM 4 OP2 U A1433 -2.667 -32.810 5.040 1.00 0.01 O
ATOM 5 O5' U A1433 -4.750 -33.453 3.825 1.00 0.01 O
ATOM 6 C5' U A1433 -6.062 -33.949 3.776 1.00 0.01 C
ATOM 7 C4' U A1433 -6.700 -33.606 2.482 1.00 0.01 C
ATOM 8 O4' U A1433 -7.056 -32.207 2.482 1.00 0.01 O
ATOM 9 C3' U A1433 -5.813 -33.774 1.260 1.00 0.01 C
ATOM 10 O3' U A1433 -5.755 -35.125 0.807 1.00 0.01 O
ATOM 11 C2' U A1433 -6.452 -32.819 0.276 1.00 0.01 C
ATOM 12 O2' U A1433 -7.624 -33.394 -0.287 1.00 0.01 O
ATOM 13 C1' U A1433 -6.874 -31.672 1.200 1.00 0.01 C
ATOM 14 N1 U A1433 -5.860 -30.602 1.284 1.00 0.01 N
ATOM 15 C2 U A1433 -5.890 -29.621 0.329 1.00 0.01 C
ATOM 16 O2 U A1433 -6.699 -29.637 -0.581 1.00 0.01 O
ATOM 17 N3 U A1433 -4.941 -28.639 0.454 1.00 0.01 N
ATOM 18 C4 U A1433 -3.989 -28.514 1.423 1.00 0.01 C
ATOM 19 O4 U A1433 -3.222 -27.569 1.372 1.00 0.01 O
ATOM 20 C5 U A1433 -4.014 -29.552 2.406 1.00 0.01 C
ATOM 21 C6 U A1433 -4.936 -30.536 2.304 1.00 0.01 C
ATOM 22 P G A1434 -4.642 -35.599 -0.264 1.00 0.01 P
ATOM 23 OP1 G A1434 -4.892 -37.038 -0.540 1.00 0.01 O
ATOM 24 OP2 G A1434 -3.309 -35.189 0.255 1.00 0.01 O
ATOM 25 O5' G A1434 -5.004 -34.747 -1.546 1.00 0.01 O
TER
ATOM 1 O3' U B1431 -2.479 -27.294 6.728 1.00 0.29 O
ATOM 2 P A B1432 -2.226 -28.445 5.659 1.00 0.56 P
ATOM 3 OP1 A B1432 -1.027 -29.182 6.099 1.00 0.56 O
ATOM 4 OP2 A B1432 -2.236 -27.833 4.328 1.00 0.56 O
ATOM 5 O5' A B1432 -3.496 -29.348 5.840 1.00 0.56 O
ATOM 6 C5' A B1432 -3.712 -30.037 7.052 1.00 0.56 C
ATOM 7 C4' A B1432 -5.080 -30.634 7.073 1.00 0.56 C
ATOM 8 O4' A B1432 -6.069 -29.586 6.872 1.00 0.56 O
ATOM 9 C3' A B1432 -5.352 -31.619 5.954 1.00 0.56 C
ATOM 10 O3' A B1432 -4.843 -32.902 6.219 1.00 0.56 O
ATOM 11 C2' A B1432 -6.866 -31.558 5.784 1.00 0.56 C
ATOM 12 O2' A B1432 -7.538 -32.365 6.741 1.00 0.56 O
ATOM 13 C1' A B1432 -7.138 -30.079 6.083 1.00 0.56 C
ATOM 14 N9 A B1432 -7.209 -29.288 4.848 1.00 0.47 N
ATOM 15 C8 A B1432 -6.287 -28.472 4.261 1.00 0.47 C
ATOM 16 N7 A B1432 -6.749 -27.956 3.143 1.00 0.47 N
ATOM 17 C5 A B1432 -8.027 -28.485 2.996 1.00 0.47 C
ATOM 18 C6 A B1432 -9.040 -28.345 2.051 1.00 0.47 C
ATOM 19 N6 A B1432 -8.967 -27.599 0.980 1.00 0.47 N
ATOM 20 N1 A B1432 -10.184 -29.007 2.221 1.00 0.47 N
ATOM 21 C2 A B1432 -10.314 -29.771 3.305 1.00 0.47 C
ATOM 22 N3 A B1432 -9.451 -29.991 4.274 1.00 0.47 N
ATOM 23 C4 A B1432 -8.317 -29.310 4.045 1.00 0.47 C
ATOM 24 P U B1433 -3.911 -33.609 5.139 1.00 0.01 P
ATOM 25 OP1 U B1433 -3.830 -35.046 5.512 1.00 0.01 O
ATOM 26 OP2 U B1433 -2.667 -32.810 5.040 1.00 0.01 O
ATOM 27 O5' U B1433 -4.750 -33.453 3.825 1.00 0.01 O
TER
Atoms:
C4: (-3.989,-28.514,1.423)
N3: (-4.941,-28.639,0.454)
OP1: (-3.830,-35.046,5.512)
OP2: (-2.667,-32.810,5.040)
C2: (-5.890,-29.621,0.329)
C1': (-6.874,-31.672,1.200)
C3': (-5.813,-33.774,1.260)
O5': (-4.750,-33.453,3.825)
O4': (-7.056,-32.207,2.482)
C5': (-6.062,-33.949,3.776)
P: (-3.911,-33.609,5.139)
C4': (-6.700,-33.606,2.482)
C2': (-6.452,-32.819,0.276)
O2': (-7.624,-33.394,-0.287)
N1: (-5.860,-30.602,1.284)
O4: (-3.222,-27.569,1.372)
O2: (-6.699,-29.637,-0.581)
C6: (-4.936,-30.536,2.304)
C5: (-4.014,-29.552,2.406)
O3': (-5.755,-35.125,0.807)
N3: (-4.941,-28.639,0.454)
OP1: (-3.830,-35.046,5.512)
OP2: (-2.667,-32.810,5.040)
C2: (-5.890,-29.621,0.329)
C1': (-6.874,-31.672,1.200)
C3': (-5.813,-33.774,1.260)
O5': (-4.750,-33.453,3.825)
O4': (-7.056,-32.207,2.482)
C5': (-6.062,-33.949,3.776)
P: (-3.911,-33.609,5.139)
C4': (-6.700,-33.606,2.482)
C2': (-6.452,-32.819,0.276)
O2': (-7.624,-33.394,-0.287)
N1: (-5.860,-30.602,1.284)
O4: (-3.222,-27.569,1.372)
O2: (-6.699,-29.637,-0.581)
C6: (-4.936,-30.536,2.304)
C5: (-4.014,-29.552,2.406)
O3': (-5.755,-35.125,0.807)
OP1: (-1.027,-29.182,6.099)
OP2: (-2.236,-27.833,4.328)
C3': (-5.352,-31.619,5.954)
C1': (-7.138,-30.079,6.083)
C5': (-3.712,-30.037,7.052)
O4': (-6.069,-29.586,6.872)
C8: (-6.287,-28.472,4.261)
O2': (-7.538,-32.365,6.741)
C6: (-9.040,-28.345,2.051)
C5: (-8.027,-28.485,2.996)
C4: (-8.317,-29.310,4.045)
P: (-2.226,-28.445,5.659)
C4': (-5.080,-30.634,7.073)
C2': (-6.866,-31.558,5.784)
C2: (-10.314,-29.771,3.305)
N1: (-10.184,-29.007,2.221)
N3: (-9.451,-29.991,4.274)
N6: (-8.967,-27.599,0.980)
N7: (-6.749,-27.956,3.143)
N9: (-7.209,-29.288,4.848)
O5': (-3.496,-29.348,5.840)
O3': (-4.843,-32.902,6.219)
OP2: (-2.236,-27.833,4.328)
C3': (-5.352,-31.619,5.954)
C1': (-7.138,-30.079,6.083)
C5': (-3.712,-30.037,7.052)
O4': (-6.069,-29.586,6.872)
C8: (-6.287,-28.472,4.261)
O2': (-7.538,-32.365,6.741)
C6: (-9.040,-28.345,2.051)
C5: (-8.027,-28.485,2.996)
C4: (-8.317,-29.310,4.045)
P: (-2.226,-28.445,5.659)
C4': (-5.080,-30.634,7.073)
C2': (-6.866,-31.558,5.784)
C2: (-10.314,-29.771,3.305)
N1: (-10.184,-29.007,2.221)
N3: (-9.451,-29.991,4.274)
N6: (-8.967,-27.599,0.980)
N7: (-6.749,-27.956,3.143)
N9: (-7.209,-29.288,4.848)
O5': (-3.496,-29.348,5.840)
O3': (-4.843,-32.902,6.219)
Image (generated by PyMOL):