Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A274:A273
Extra
PDB:
ATOM 1 O3' A A 273 64.543 106.202 1.319 1.00113.33 O
ATOM 2 P U A 274 64.278 107.712 1.825 1.00111.46 P
ATOM 3 OP1 U A 274 63.605 107.606 3.140 1.00111.59 O
ATOM 4 OP2 U A 274 63.645 108.507 0.737 1.00111.19 O
ATOM 5 O5' U A 274 65.730 108.315 2.075 1.00109.33 O
ATOM 6 C5' U A 274 66.662 107.646 2.936 1.00106.44 C
ATOM 7 C4' U A 274 68.073 108.062 2.604 1.00104.33 C
ATOM 8 O4' U A 274 68.372 107.737 1.222 1.00103.32 O
ATOM 9 C3' U A 274 68.352 109.549 2.717 1.00103.52 C
ATOM 10 O3' U A 274 68.623 109.886 4.074 1.00103.70 O
ATOM 11 C2' U A 274 69.563 109.713 1.802 1.00102.96 C
ATOM 12 O2' U A 274 70.789 109.315 2.386 1.00101.97 O
ATOM 13 C1' U A 274 69.220 108.735 0.669 1.00103.02 C
ATOM 14 N1 U A 274 68.517 109.368 -0.464 1.00103.18 N
ATOM 15 C2 U A 274 69.261 110.111 -1.395 1.00102.82 C
ATOM 16 O2 U A 274 70.482 110.217 -1.356 1.00102.11 O
ATOM 17 N3 U A 274 68.510 110.715 -2.380 1.00102.36 N
ATOM 18 C4 U A 274 67.135 110.639 -2.548 1.00102.30 C
ATOM 19 O4 U A 274 66.602 111.215 -3.500 1.00102.17 O
ATOM 20 C5 U A 274 66.459 109.839 -1.576 1.00102.50 C
ATOM 21 C6 U A 274 67.150 109.248 -0.597 1.00103.02 C
ATOM 22 P C A 275 68.184 111.318 4.662 1.00103.56 P
ATOM 23 OP1 C A 275 68.546 111.272 6.101 1.00103.93 O
ATOM 24 OP2 C A 275 66.786 111.638 4.266 1.00102.61 O
ATOM 25 O5' C A 275 69.164 112.355 3.955 1.00103.69 O
TER
ATOM 1 O3' C B 272 61.575 106.672 -3.936 1.00132.95 O
ATOM 2 P A B 273 62.540 107.386 -2.849 1.00130.68 P
ATOM 3 OP1 A B 273 61.706 107.715 -1.661 1.00130.70 O
ATOM 4 OP2 A B 273 63.266 108.475 -3.562 1.00130.17 O
ATOM 5 O5' A B 273 63.619 106.288 -2.428 1.00127.85 O
ATOM 6 C5' A B 273 63.306 105.221 -1.507 1.00122.28 C
ATOM 7 C4' A B 273 64.547 104.838 -0.732 1.00118.30 C
ATOM 8 O4' A B 273 65.590 104.454 -1.676 1.00117.19 O
ATOM 9 C3' A B 273 65.174 105.979 0.057 1.00115.99 C
ATOM 10 O3' A B 273 64.543 106.202 1.319 1.00113.33 O
ATOM 11 C2' A B 273 66.629 105.541 0.153 1.00115.62 C
ATOM 12 O2' A B 273 66.856 104.528 1.119 1.00115.19 O
ATOM 13 C1' A B 273 66.848 104.963 -1.247 1.00115.63 C
ATOM 14 N9 A B 273 67.321 105.948 -2.237 1.00114.82 N
ATOM 15 C8 A B 273 66.607 106.518 -3.270 1.00114.19 C
ATOM 16 N7 A B 273 67.309 107.341 -4.014 1.00113.58 N
ATOM 17 C5 A B 273 68.571 107.324 -3.433 1.00113.60 C
ATOM 18 C6 A B 273 69.783 107.982 -3.760 1.00113.35 C
ATOM 19 N6 A B 273 69.934 108.800 -4.807 1.00112.93 N
ATOM 20 N1 A B 273 70.851 107.757 -2.964 1.00113.45 N
ATOM 21 C2 A B 273 70.715 106.922 -1.928 1.00113.70 C
ATOM 22 N3 A B 273 69.644 106.236 -1.528 1.00114.19 N
ATOM 23 C4 A B 273 68.591 106.482 -2.330 1.00114.14 C
ATOM 24 P U B 274 64.278 107.712 1.825 1.00111.46 P
ATOM 25 OP1 U B 274 63.605 107.606 3.140 1.00111.59 O
ATOM 26 OP2 U B 274 63.645 108.507 0.737 1.00111.19 O
ATOM 27 O5' U B 274 65.730 108.315 2.075 1.00109.33 O
TER
ATOM 2 P U A 274 64.278 107.712 1.825 1.00111.46 P
ATOM 3 OP1 U A 274 63.605 107.606 3.140 1.00111.59 O
ATOM 4 OP2 U A 274 63.645 108.507 0.737 1.00111.19 O
ATOM 5 O5' U A 274 65.730 108.315 2.075 1.00109.33 O
ATOM 6 C5' U A 274 66.662 107.646 2.936 1.00106.44 C
ATOM 7 C4' U A 274 68.073 108.062 2.604 1.00104.33 C
ATOM 8 O4' U A 274 68.372 107.737 1.222 1.00103.32 O
ATOM 9 C3' U A 274 68.352 109.549 2.717 1.00103.52 C
ATOM 10 O3' U A 274 68.623 109.886 4.074 1.00103.70 O
ATOM 11 C2' U A 274 69.563 109.713 1.802 1.00102.96 C
ATOM 12 O2' U A 274 70.789 109.315 2.386 1.00101.97 O
ATOM 13 C1' U A 274 69.220 108.735 0.669 1.00103.02 C
ATOM 14 N1 U A 274 68.517 109.368 -0.464 1.00103.18 N
ATOM 15 C2 U A 274 69.261 110.111 -1.395 1.00102.82 C
ATOM 16 O2 U A 274 70.482 110.217 -1.356 1.00102.11 O
ATOM 17 N3 U A 274 68.510 110.715 -2.380 1.00102.36 N
ATOM 18 C4 U A 274 67.135 110.639 -2.548 1.00102.30 C
ATOM 19 O4 U A 274 66.602 111.215 -3.500 1.00102.17 O
ATOM 20 C5 U A 274 66.459 109.839 -1.576 1.00102.50 C
ATOM 21 C6 U A 274 67.150 109.248 -0.597 1.00103.02 C
ATOM 22 P C A 275 68.184 111.318 4.662 1.00103.56 P
ATOM 23 OP1 C A 275 68.546 111.272 6.101 1.00103.93 O
ATOM 24 OP2 C A 275 66.786 111.638 4.266 1.00102.61 O
ATOM 25 O5' C A 275 69.164 112.355 3.955 1.00103.69 O
TER
ATOM 1 O3' C B 272 61.575 106.672 -3.936 1.00132.95 O
ATOM 2 P A B 273 62.540 107.386 -2.849 1.00130.68 P
ATOM 3 OP1 A B 273 61.706 107.715 -1.661 1.00130.70 O
ATOM 4 OP2 A B 273 63.266 108.475 -3.562 1.00130.17 O
ATOM 5 O5' A B 273 63.619 106.288 -2.428 1.00127.85 O
ATOM 6 C5' A B 273 63.306 105.221 -1.507 1.00122.28 C
ATOM 7 C4' A B 273 64.547 104.838 -0.732 1.00118.30 C
ATOM 8 O4' A B 273 65.590 104.454 -1.676 1.00117.19 O
ATOM 9 C3' A B 273 65.174 105.979 0.057 1.00115.99 C
ATOM 10 O3' A B 273 64.543 106.202 1.319 1.00113.33 O
ATOM 11 C2' A B 273 66.629 105.541 0.153 1.00115.62 C
ATOM 12 O2' A B 273 66.856 104.528 1.119 1.00115.19 O
ATOM 13 C1' A B 273 66.848 104.963 -1.247 1.00115.63 C
ATOM 14 N9 A B 273 67.321 105.948 -2.237 1.00114.82 N
ATOM 15 C8 A B 273 66.607 106.518 -3.270 1.00114.19 C
ATOM 16 N7 A B 273 67.309 107.341 -4.014 1.00113.58 N
ATOM 17 C5 A B 273 68.571 107.324 -3.433 1.00113.60 C
ATOM 18 C6 A B 273 69.783 107.982 -3.760 1.00113.35 C
ATOM 19 N6 A B 273 69.934 108.800 -4.807 1.00112.93 N
ATOM 20 N1 A B 273 70.851 107.757 -2.964 1.00113.45 N
ATOM 21 C2 A B 273 70.715 106.922 -1.928 1.00113.70 C
ATOM 22 N3 A B 273 69.644 106.236 -1.528 1.00114.19 N
ATOM 23 C4 A B 273 68.591 106.482 -2.330 1.00114.14 C
ATOM 24 P U B 274 64.278 107.712 1.825 1.00111.46 P
ATOM 25 OP1 U B 274 63.605 107.606 3.140 1.00111.59 O
ATOM 26 OP2 U B 274 63.645 108.507 0.737 1.00111.19 O
ATOM 27 O5' U B 274 65.730 108.315 2.075 1.00109.33 O
TER
Atoms:
C4: (67.135,110.639,-2.548)
N3: (68.510,110.715,-2.380)
OP1: (63.605,107.606,3.140)
OP2: (63.645,108.507,0.737)
C2: (69.261,110.111,-1.395)
C1': (69.220,108.735,0.669)
C3': (68.352,109.549,2.717)
O5': (65.730,108.315,2.075)
O4': (68.372,107.737,1.222)
C5': (66.662,107.646,2.936)
P: (64.278,107.712,1.825)
C4': (68.073,108.062,2.604)
C2': (69.563,109.713,1.802)
O2': (70.789,109.315,2.386)
N1: (68.517,109.368,-0.464)
O4: (66.602,111.215,-3.500)
O2: (70.482,110.217,-1.356)
C6: (67.150,109.248,-0.597)
C5: (66.459,109.839,-1.576)
O3': (68.623,109.886,4.074)
N3: (68.510,110.715,-2.380)
OP1: (63.605,107.606,3.140)
OP2: (63.645,108.507,0.737)
C2: (69.261,110.111,-1.395)
C1': (69.220,108.735,0.669)
C3': (68.352,109.549,2.717)
O5': (65.730,108.315,2.075)
O4': (68.372,107.737,1.222)
C5': (66.662,107.646,2.936)
P: (64.278,107.712,1.825)
C4': (68.073,108.062,2.604)
C2': (69.563,109.713,1.802)
O2': (70.789,109.315,2.386)
N1: (68.517,109.368,-0.464)
O4: (66.602,111.215,-3.500)
O2: (70.482,110.217,-1.356)
C6: (67.150,109.248,-0.597)
C5: (66.459,109.839,-1.576)
O3': (68.623,109.886,4.074)
OP1: (61.706,107.715,-1.661)
OP2: (63.266,108.475,-3.562)
C3': (65.174,105.979,0.057)
C1': (66.848,104.963,-1.247)
C5': (63.306,105.221,-1.507)
O4': (65.590,104.454,-1.676)
C8: (66.607,106.518,-3.270)
O2': (66.856,104.528,1.119)
C6: (69.783,107.982,-3.760)
C5: (68.571,107.324,-3.433)
C4: (68.591,106.482,-2.330)
P: (62.540,107.386,-2.849)
C4': (64.547,104.838,-0.732)
C2': (66.629,105.541,0.153)
C2: (70.715,106.922,-1.928)
N1: (70.851,107.757,-2.964)
N3: (69.644,106.236,-1.528)
N6: (69.934,108.800,-4.807)
N7: (67.309,107.341,-4.014)
N9: (67.321,105.948,-2.237)
O5': (63.619,106.288,-2.428)
O3': (64.543,106.202,1.319)
OP2: (63.266,108.475,-3.562)
C3': (65.174,105.979,0.057)
C1': (66.848,104.963,-1.247)
C5': (63.306,105.221,-1.507)
O4': (65.590,104.454,-1.676)
C8: (66.607,106.518,-3.270)
O2': (66.856,104.528,1.119)
C6: (69.783,107.982,-3.760)
C5: (68.571,107.324,-3.433)
C4: (68.591,106.482,-2.330)
P: (62.540,107.386,-2.849)
C4': (64.547,104.838,-0.732)
C2': (66.629,105.541,0.153)
C2: (70.715,106.922,-1.928)
N1: (70.851,107.757,-2.964)
N3: (69.644,106.236,-1.528)
N6: (69.934,108.800,-4.807)
N7: (67.309,107.341,-4.014)
N9: (67.321,105.948,-2.237)
O5': (63.619,106.288,-2.428)
O3': (64.543,106.202,1.319)
Image (generated by PyMOL):