ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3CPW:0568:0565

Extra

PDB:
ATOM 1 O3' G A 567 6.557 93.214 135.426 1.00 61.58 O
ATOM 2 P A A 568 5.517 93.618 134.269 1.00 62.30 P
ATOM 3 OP1 A A 568 4.822 94.841 134.746 1.00 61.22 O
ATOM 4 OP2 A A 568 4.726 92.429 133.879 1.00 59.43 O
ATOM 5 O5' A A 568 6.434 94.026 133.030 1.00 63.33 O
ATOM 6 C5' A A 568 7.078 95.322 132.978 1.00 61.97 C
ATOM 7 C4' A A 568 8.183 95.322 131.947 1.00 60.32 C
ATOM 8 O4' A A 568 9.138 94.283 132.282 1.00 59.73 O
ATOM 9 C3' A A 568 7.781 95.020 130.508 1.00 60.39 C
ATOM 10 O3' A A 568 7.351 96.190 129.817 1.00 59.64 O
ATOM 11 C2' A A 568 9.081 94.498 129.911 1.00 60.98 C
ATOM 12 O2' A A 568 9.956 95.534 129.500 1.00 62.68 O
ATOM 13 C1' A A 568 9.697 93.753 131.097 1.00 59.97 C
ATOM 14 N9 A A 568 9.421 92.318 131.039 1.00 59.75 N
ATOM 15 C8 A A 568 8.217 91.667 131.183 1.00 60.59 C
ATOM 16 N7 A A 568 8.292 90.370 130.996 1.00 58.81 N
ATOM 17 C5 A A 568 9.634 90.149 130.727 1.00 57.18 C
ATOM 18 C6 A A 568 10.359 88.985 130.432 1.00 56.97 C
ATOM 19 N6 A A 568 9.813 87.774 130.326 1.00 56.02 N
ATOM 20 N1 A A 568 11.688 89.108 130.237 1.00 58.62 N
ATOM 21 C2 A A 568 12.241 90.325 130.323 1.00 59.21 C
ATOM 22 N3 A A 568 11.665 91.494 130.580 1.00 59.36 N
ATOM 23 C4 A A 568 10.345 91.337 130.774 1.00 58.68 C
ATOM 24 P G A 569 5.816 96.333 129.353 1.00 60.61 P
ATOM 25 OP1 G A 569 5.737 97.530 128.484 1.00 61.75 O
ATOM 26 OP2 G A 569 4.965 96.261 130.561 1.00 63.32 O
ATOM 27 O5' G A 569 5.522 95.025 128.485 1.00 58.72 O
TER

ATOM 1 O3' C B 564 1.911 80.250 133.742 1.00 82.37 O
ATOM 2 P G B 565 2.503 80.651 135.179 1.00 81.54 P
ATOM 3 OP1 G B 565 3.164 79.437 135.724 1.00 81.96 O
ATOM 4 OP2 G B 565 1.439 81.329 135.968 1.00 80.57 O
ATOM 5 O5' G B 565 3.618 81.738 134.831 1.00 82.35 O
ATOM 6 C5' G B 565 4.709 81.412 133.943 1.00 80.91 C
ATOM 7 C4' G B 565 5.548 82.636 133.647 1.00 79.70 C
ATOM 8 O4' G B 565 4.841 83.550 132.766 1.00 79.18 O
ATOM 9 C3' G B 565 5.946 83.500 134.830 1.00 79.20 C
ATOM 10 O3' G B 565 7.039 82.973 135.560 1.00 78.56 O
ATOM 11 C2' G B 565 6.291 84.825 134.163 1.00 78.90 C
ATOM 12 O2' G B 565 7.603 84.844 133.632 1.00 78.57 O
ATOM 13 C1' G B 565 5.265 84.879 133.030 1.00 78.38 C
ATOM 14 N9 G B 565 4.113 85.682 133.421 1.00 77.32 N
ATOM 15 C8 G B 565 2.908 85.242 133.912 1.00 77.25 C
ATOM 16 N7 G B 565 2.099 86.217 134.231 1.00 77.17 N
ATOM 17 C5 G B 565 2.809 87.369 133.923 1.00 76.59 C
ATOM 18 C6 G B 565 2.452 88.737 134.064 1.00 76.09 C
ATOM 19 O6 G B 565 1.407 89.222 134.515 1.00 75.55 O
ATOM 20 N1 G B 565 3.467 89.577 133.618 1.00 76.58 N
ATOM 21 C2 G B 565 4.672 89.160 133.108 1.00 77.77 C
ATOM 22 N2 G B 565 5.523 90.124 132.729 1.00 78.10 N
ATOM 23 N3 G B 565 5.018 87.891 132.978 1.00 78.32 N
ATOM 24 C4 G B 565 4.046 87.055 133.404 1.00 77.48 C
ATOM 25 P C B 566 6.959 82.927 137.162 1.00 76.46 P
ATOM 26 OP1 C B 566 8.232 82.339 137.653 1.00 77.33 O
ATOM 27 OP2 C B 566 5.666 82.300 137.529 1.00 78.45 O
ATOM 28 O5' C B 566 6.891 84.453 137.609 1.00 75.93 O
TER

Atoms:
OP1: (4.822,94.841,134.746)
OP2: (4.726,92.429,133.879)
C3': (7.781,95.020,130.508)
C1': (9.697,93.753,131.097)
C5': (7.078,95.322,132.978)
O4': (9.138,94.283,132.282)
C8: (8.217,91.667,131.183)
O2': (9.956,95.534,129.500)
C6: (10.359,88.985,130.432)
C5: (9.634,90.149,130.727)
C4: (10.345,91.337,130.774)
P: (5.517,93.618,134.269)
C4': (8.183,95.322,131.947)
C2': (9.081,94.498,129.911)
C2: (12.241,90.325,130.323)
N1: (11.688,89.108,130.237)
N3: (11.665,91.494,130.580)
N6: (9.813,87.774,130.326)
N7: (8.292,90.370,130.996)
N9: (9.421,92.318,131.039)
O5': (6.434,94.026,133.030)
O3': (7.351,96.190,129.817)
OP1: (3.164,79.437,135.724)
OP2: (1.439,81.329,135.968)
C3': (5.946,83.500,134.830)
C1': (5.265,84.879,133.030)
C5': (4.709,81.412,133.943)
O6: (1.407,89.222,134.515)
O4': (4.841,83.550,132.766)
C8: (2.908,85.242,133.912)
C2: (4.672,89.160,133.108)
C6: (2.452,88.737,134.064)
C5: (2.809,87.369,133.923)
C4: (4.046,87.055,133.404)
P: (2.503,80.651,135.179)
C4': (5.548,82.636,133.647)
C2': (6.291,84.825,134.163)
O2': (7.603,84.844,133.632)
N1: (3.467,89.577,133.618)
N2: (5.523,90.124,132.729)
N3: (5.018,87.891,132.978)
N7: (2.099,86.217,134.231)
N9: (4.113,85.682,133.421)
O5': (3.618,81.738,134.831)
O3': (7.039,82.973,135.560)
Image (generated by PyMOL):
PyMOL image
show in jmol