Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A363:A364
Extra
PDB:
ATOM 1 O3' U A 362 93.954 90.456 -3.888 1.00 87.60 O
ATOM 2 P G A 363 94.325 89.492 -2.664 1.00 87.80 P
ATOM 3 OP1 G A 363 95.682 88.959 -2.949 1.00 87.90 O
ATOM 4 OP2 G A 363 93.193 88.540 -2.419 1.00 88.00 O
ATOM 5 O5' G A 363 94.470 90.491 -1.430 1.00 86.92 O
ATOM 6 C5' G A 363 93.333 91.210 -0.892 1.00 84.40 C
ATOM 7 C4' G A 363 93.541 91.468 0.585 1.00 81.76 C
ATOM 8 O4' G A 363 93.601 90.194 1.281 1.00 81.56 O
ATOM 9 C3' G A 363 94.856 92.133 0.960 1.00 80.72 C
ATOM 10 O3' G A 363 94.816 93.540 0.813 1.00 77.23 O
ATOM 11 C2' G A 363 95.020 91.730 2.417 1.00 81.28 C
ATOM 12 O2' G A 363 94.245 92.525 3.294 1.00 81.96 O
ATOM 13 C1' G A 363 94.487 90.295 2.390 1.00 81.62 C
ATOM 14 N9 G A 363 95.556 89.305 2.248 1.00 81.74 N
ATOM 15 C8 G A 363 96.294 89.033 1.120 1.00 81.52 C
ATOM 16 N7 G A 363 97.207 88.118 1.311 1.00 82.15 N
ATOM 17 C5 G A 363 97.063 87.758 2.644 1.00 82.28 C
ATOM 18 C6 G A 363 97.787 86.813 3.430 1.00 82.83 C
ATOM 19 O6 G A 363 98.742 86.094 3.097 1.00 82.91 O
ATOM 20 N1 G A 363 97.303 86.757 4.733 1.00 82.63 N
ATOM 21 C2 G A 363 96.263 87.509 5.223 1.00 82.25 C
ATOM 22 N2 G A 363 95.931 87.299 6.507 1.00 82.04 N
ATOM 23 N3 G A 363 95.591 88.400 4.507 1.00 82.26 N
ATOM 24 C4 G A 363 96.041 88.471 3.236 1.00 82.05 C
ATOM 25 P C A 364 96.036 94.298 0.102 1.00 74.47 P
ATOM 26 OP1 C A 364 96.094 93.713 -1.265 1.00 74.57 O
ATOM 27 OP2 C A 364 97.230 94.221 0.994 1.00 72.69 O
ATOM 28 O5' C A 364 95.492 95.794 0.018 1.00 73.70 O
TER
ATOM 1 O3' G B 363 94.816 93.540 0.813 1.00 77.23 O
ATOM 2 P C B 364 96.036 94.298 0.102 1.00 74.47 P
ATOM 3 OP1 C B 364 96.094 93.713 -1.265 1.00 74.57 O
ATOM 4 OP2 C B 364 97.230 94.221 0.994 1.00 72.69 O
ATOM 5 O5' C B 364 95.492 95.794 0.018 1.00 73.70 O
ATOM 6 C5' C B 364 96.329 96.901 -0.351 1.00 72.30 C
ATOM 7 C4' C B 364 95.513 98.174 -0.342 1.00 71.98 C
ATOM 8 O4' C B 364 94.491 98.083 -1.372 1.00 71.35 O
ATOM 9 C3' C B 364 94.730 98.459 0.937 1.00 71.89 C
ATOM 10 O3' C B 364 95.556 99.083 1.930 1.00 72.06 O
ATOM 11 C2' C B 364 93.595 99.345 0.429 1.00 71.63 C
ATOM 12 O2' C B 364 93.977 100.686 0.193 1.00 72.97 O
ATOM 13 C1' C B 364 93.296 98.695 -0.922 1.00 70.55 C
ATOM 14 N1 C B 364 92.234 97.675 -0.872 1.00 69.55 N
ATOM 15 C2 C B 364 90.905 98.097 -0.817 1.00 69.49 C
ATOM 16 O2 C B 364 90.658 99.309 -0.756 1.00 69.80 O
ATOM 17 N3 C B 364 89.916 97.180 -0.829 1.00 69.71 N
ATOM 18 C4 C B 364 90.208 95.883 -0.890 1.00 69.38 C
ATOM 19 N4 C B 364 89.184 95.024 -0.946 1.00 68.46 N
ATOM 20 C5 C B 364 91.556 95.415 -0.908 1.00 69.63 C
ATOM 21 C6 C B 364 92.530 96.338 -0.895 1.00 69.47 C
ATOM 22 P C B 365 95.192 98.948 3.505 1.00 71.08 P
ATOM 23 OP1 C B 365 96.284 99.624 4.252 1.00 71.58 O
ATOM 24 OP2 C B 365 94.839 97.544 3.844 1.00 70.99 O
ATOM 25 O5' C B 365 93.884 99.831 3.657 1.00 69.70 O
TER
ATOM 2 P G A 363 94.325 89.492 -2.664 1.00 87.80 P
ATOM 3 OP1 G A 363 95.682 88.959 -2.949 1.00 87.90 O
ATOM 4 OP2 G A 363 93.193 88.540 -2.419 1.00 88.00 O
ATOM 5 O5' G A 363 94.470 90.491 -1.430 1.00 86.92 O
ATOM 6 C5' G A 363 93.333 91.210 -0.892 1.00 84.40 C
ATOM 7 C4' G A 363 93.541 91.468 0.585 1.00 81.76 C
ATOM 8 O4' G A 363 93.601 90.194 1.281 1.00 81.56 O
ATOM 9 C3' G A 363 94.856 92.133 0.960 1.00 80.72 C
ATOM 10 O3' G A 363 94.816 93.540 0.813 1.00 77.23 O
ATOM 11 C2' G A 363 95.020 91.730 2.417 1.00 81.28 C
ATOM 12 O2' G A 363 94.245 92.525 3.294 1.00 81.96 O
ATOM 13 C1' G A 363 94.487 90.295 2.390 1.00 81.62 C
ATOM 14 N9 G A 363 95.556 89.305 2.248 1.00 81.74 N
ATOM 15 C8 G A 363 96.294 89.033 1.120 1.00 81.52 C
ATOM 16 N7 G A 363 97.207 88.118 1.311 1.00 82.15 N
ATOM 17 C5 G A 363 97.063 87.758 2.644 1.00 82.28 C
ATOM 18 C6 G A 363 97.787 86.813 3.430 1.00 82.83 C
ATOM 19 O6 G A 363 98.742 86.094 3.097 1.00 82.91 O
ATOM 20 N1 G A 363 97.303 86.757 4.733 1.00 82.63 N
ATOM 21 C2 G A 363 96.263 87.509 5.223 1.00 82.25 C
ATOM 22 N2 G A 363 95.931 87.299 6.507 1.00 82.04 N
ATOM 23 N3 G A 363 95.591 88.400 4.507 1.00 82.26 N
ATOM 24 C4 G A 363 96.041 88.471 3.236 1.00 82.05 C
ATOM 25 P C A 364 96.036 94.298 0.102 1.00 74.47 P
ATOM 26 OP1 C A 364 96.094 93.713 -1.265 1.00 74.57 O
ATOM 27 OP2 C A 364 97.230 94.221 0.994 1.00 72.69 O
ATOM 28 O5' C A 364 95.492 95.794 0.018 1.00 73.70 O
TER
ATOM 1 O3' G B 363 94.816 93.540 0.813 1.00 77.23 O
ATOM 2 P C B 364 96.036 94.298 0.102 1.00 74.47 P
ATOM 3 OP1 C B 364 96.094 93.713 -1.265 1.00 74.57 O
ATOM 4 OP2 C B 364 97.230 94.221 0.994 1.00 72.69 O
ATOM 5 O5' C B 364 95.492 95.794 0.018 1.00 73.70 O
ATOM 6 C5' C B 364 96.329 96.901 -0.351 1.00 72.30 C
ATOM 7 C4' C B 364 95.513 98.174 -0.342 1.00 71.98 C
ATOM 8 O4' C B 364 94.491 98.083 -1.372 1.00 71.35 O
ATOM 9 C3' C B 364 94.730 98.459 0.937 1.00 71.89 C
ATOM 10 O3' C B 364 95.556 99.083 1.930 1.00 72.06 O
ATOM 11 C2' C B 364 93.595 99.345 0.429 1.00 71.63 C
ATOM 12 O2' C B 364 93.977 100.686 0.193 1.00 72.97 O
ATOM 13 C1' C B 364 93.296 98.695 -0.922 1.00 70.55 C
ATOM 14 N1 C B 364 92.234 97.675 -0.872 1.00 69.55 N
ATOM 15 C2 C B 364 90.905 98.097 -0.817 1.00 69.49 C
ATOM 16 O2 C B 364 90.658 99.309 -0.756 1.00 69.80 O
ATOM 17 N3 C B 364 89.916 97.180 -0.829 1.00 69.71 N
ATOM 18 C4 C B 364 90.208 95.883 -0.890 1.00 69.38 C
ATOM 19 N4 C B 364 89.184 95.024 -0.946 1.00 68.46 N
ATOM 20 C5 C B 364 91.556 95.415 -0.908 1.00 69.63 C
ATOM 21 C6 C B 364 92.530 96.338 -0.895 1.00 69.47 C
ATOM 22 P C B 365 95.192 98.948 3.505 1.00 71.08 P
ATOM 23 OP1 C B 365 96.284 99.624 4.252 1.00 71.58 O
ATOM 24 OP2 C B 365 94.839 97.544 3.844 1.00 70.99 O
ATOM 25 O5' C B 365 93.884 99.831 3.657 1.00 69.70 O
TER
Atoms:
OP1: (95.682,88.959,-2.949)
OP2: (93.193,88.540,-2.419)
C3': (94.856,92.133,0.960)
C1': (94.487,90.295,2.390)
C5': (93.333,91.210,-0.892)
O6: (98.742,86.094,3.097)
O4': (93.601,90.194,1.281)
C8: (96.294,89.033,1.120)
C2: (96.263,87.509,5.223)
C6: (97.787,86.813,3.430)
C5: (97.063,87.758,2.644)
C4: (96.041,88.471,3.236)
P: (94.325,89.492,-2.664)
C4': (93.541,91.468,0.585)
C2': (95.020,91.730,2.417)
O2': (94.245,92.525,3.294)
N1: (97.303,86.757,4.733)
N2: (95.931,87.299,6.507)
N3: (95.591,88.400,4.507)
N7: (97.207,88.118,1.311)
N9: (95.556,89.305,2.248)
O5': (94.470,90.491,-1.430)
O3': (94.816,93.540,0.813)
OP2: (93.193,88.540,-2.419)
C3': (94.856,92.133,0.960)
C1': (94.487,90.295,2.390)
C5': (93.333,91.210,-0.892)
O6: (98.742,86.094,3.097)
O4': (93.601,90.194,1.281)
C8: (96.294,89.033,1.120)
C2: (96.263,87.509,5.223)
C6: (97.787,86.813,3.430)
C5: (97.063,87.758,2.644)
C4: (96.041,88.471,3.236)
P: (94.325,89.492,-2.664)
C4': (93.541,91.468,0.585)
C2': (95.020,91.730,2.417)
O2': (94.245,92.525,3.294)
N1: (97.303,86.757,4.733)
N2: (95.931,87.299,6.507)
N3: (95.591,88.400,4.507)
N7: (97.207,88.118,1.311)
N9: (95.556,89.305,2.248)
O5': (94.470,90.491,-1.430)
O3': (94.816,93.540,0.813)
C2: (90.905,98.097,-0.817)
OP1: (96.094,93.713,-1.265)
OP2: (97.230,94.221,0.994)
C4: (90.208,95.883,-0.890)
O5': (95.492,95.794,0.018)
C3': (94.730,98.459,0.937)
C1': (93.296,98.695,-0.922)
O4': (94.491,98.083,-1.372)
C5': (96.329,96.901,-0.351)
P: (96.036,94.298,0.102)
O2: (90.658,99.309,-0.756)
C4': (95.513,98.174,-0.342)
C2': (93.595,99.345,0.429)
O2': (93.977,100.686,0.193)
N1: (92.234,97.675,-0.872)
N3: (89.916,97.180,-0.829)
N4: (89.184,95.024,-0.946)
C6: (92.530,96.338,-0.895)
C5: (91.556,95.415,-0.908)
O3': (95.556,99.083,1.930)
OP1: (96.094,93.713,-1.265)
OP2: (97.230,94.221,0.994)
C4: (90.208,95.883,-0.890)
O5': (95.492,95.794,0.018)
C3': (94.730,98.459,0.937)
C1': (93.296,98.695,-0.922)
O4': (94.491,98.083,-1.372)
C5': (96.329,96.901,-0.351)
P: (96.036,94.298,0.102)
O2: (90.658,99.309,-0.756)
C4': (95.513,98.174,-0.342)
C2': (93.595,99.345,0.429)
O2': (93.977,100.686,0.193)
N1: (92.234,97.675,-0.872)
N3: (89.916,97.180,-0.829)
N4: (89.184,95.024,-0.946)
C6: (92.530,96.338,-0.895)
C5: (91.556,95.415,-0.908)
O3': (95.556,99.083,1.930)
Image (generated by PyMOL):