Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:B21:B22
Extra
PDB:
ATOM 1 O3' G A 20 58.314 8.968 112.803 1.00 96.85 O
ATOM 2 P G A 21 59.496 7.866 112.760 1.00 98.75 P
ATOM 3 OP1 G A 21 59.438 7.022 114.006 1.00 99.31 O
ATOM 4 OP2 G A 21 60.781 8.536 112.414 1.00 97.62 O
ATOM 5 O5' G A 21 59.074 6.986 111.514 1.00101.14 O
ATOM 6 C5' G A 21 60.029 6.370 110.754 1.00105.37 C
ATOM 7 C4' G A 21 59.769 6.713 109.269 1.00108.28 C
ATOM 8 O4' G A 21 59.616 8.153 109.167 1.00107.45 O
ATOM 9 C3' G A 21 60.932 6.364 108.398 1.00111.36 C
ATOM 10 O3' G A 21 60.850 5.052 107.922 1.00117.85 O
ATOM 11 C2' G A 21 60.987 7.432 107.331 1.00109.49 C
ATOM 12 O2' G A 21 60.129 7.259 106.252 1.00109.97 O
ATOM 13 C1' G A 21 60.470 8.637 108.117 1.00107.42 C
ATOM 14 N9 G A 21 61.416 9.630 108.645 1.00105.32 N
ATOM 15 C8 G A 21 62.116 9.576 109.830 1.00105.25 C
ATOM 16 N7 G A 21 62.828 10.649 110.054 1.00103.92 N
ATOM 17 C5 G A 21 62.575 11.480 108.973 1.00102.82 C
ATOM 18 C6 G A 21 63.048 12.803 108.706 1.00101.21 C
ATOM 19 O6 G A 21 63.784 13.530 109.402 1.00100.31 O
ATOM 20 N1 G A 21 62.578 13.268 107.495 1.00 99.23 N
ATOM 21 C2 G A 21 61.747 12.565 106.649 1.00 99.24 C
ATOM 22 N2 G A 21 61.396 13.158 105.517 1.00 97.51 N
ATOM 23 N3 G A 21 61.286 11.350 106.889 1.00101.08 N
ATOM 24 C4 G A 21 61.739 10.863 108.066 1.00103.27 C
ATOM 25 P U A 22 62.248 4.195 107.818 1.00122.58 P
ATOM 26 OP1 U A 22 62.721 4.035 109.246 1.00121.71 O
ATOM 27 OP2 U A 22 63.183 4.781 106.849 1.00122.88 O
ATOM 28 O5' U A 22 61.677 2.788 107.227 1.00126.62 O
TER
ATOM 1 O3' G B 21 60.850 5.052 107.922 1.00117.85 O
ATOM 2 P U B 22 62.248 4.195 107.818 1.00122.58 P
ATOM 3 OP1 U B 22 62.721 4.035 109.246 1.00121.71 O
ATOM 4 OP2 U B 22 63.183 4.781 106.849 1.00122.88 O
ATOM 5 O5' U B 22 61.677 2.788 107.227 1.00126.62 O
ATOM 6 C5' U B 22 62.326 1.365 107.179 1.00134.08 C
ATOM 7 C4' U B 22 61.326 0.216 107.069 1.00138.87 C
ATOM 8 O4' U B 22 60.644 0.223 108.310 1.00140.55 O
ATOM 9 C3' U B 22 60.178 0.219 105.991 1.00141.04 C
ATOM 10 O3' U B 22 60.504 -0.139 104.629 1.00143.04 O
ATOM 11 C2' U B 22 59.143 -0.760 106.642 1.00141.68 C
ATOM 12 O2' U B 22 59.448 -2.258 106.622 1.00141.76 O
ATOM 13 C1' U B 22 59.339 -0.389 108.133 1.00142.32 C
ATOM 14 N1 U B 22 58.306 0.535 108.598 1.00143.91 N
ATOM 15 C2 U B 22 57.082 0.013 108.811 1.00144.57 C
ATOM 16 O2 U B 22 56.844 -1.197 108.777 1.00144.87 O
ATOM 17 N3 U B 22 56.061 0.896 109.053 1.00144.93 N
ATOM 18 C4 U B 22 56.159 2.251 109.100 1.00144.99 C
ATOM 19 O4 U B 22 55.196 2.986 109.440 1.00145.16 O
ATOM 20 C5 U B 22 57.506 2.715 108.939 1.00144.76 C
ATOM 21 C6 U B 22 58.520 1.866 108.730 1.00144.49 C
ATOM 22 P U B 23 61.980 -0.230 104.142 1.00144.55 P
ATOM 23 OP1 U B 23 62.218 -1.680 104.418 1.00145.07 O
ATOM 24 OP2 U B 23 62.412 0.784 104.992 1.00144.71 O
ATOM 25 O5' U B 23 61.885 -0.099 102.531 1.00144.79 O
TER
ATOM 2 P G A 21 59.496 7.866 112.760 1.00 98.75 P
ATOM 3 OP1 G A 21 59.438 7.022 114.006 1.00 99.31 O
ATOM 4 OP2 G A 21 60.781 8.536 112.414 1.00 97.62 O
ATOM 5 O5' G A 21 59.074 6.986 111.514 1.00101.14 O
ATOM 6 C5' G A 21 60.029 6.370 110.754 1.00105.37 C
ATOM 7 C4' G A 21 59.769 6.713 109.269 1.00108.28 C
ATOM 8 O4' G A 21 59.616 8.153 109.167 1.00107.45 O
ATOM 9 C3' G A 21 60.932 6.364 108.398 1.00111.36 C
ATOM 10 O3' G A 21 60.850 5.052 107.922 1.00117.85 O
ATOM 11 C2' G A 21 60.987 7.432 107.331 1.00109.49 C
ATOM 12 O2' G A 21 60.129 7.259 106.252 1.00109.97 O
ATOM 13 C1' G A 21 60.470 8.637 108.117 1.00107.42 C
ATOM 14 N9 G A 21 61.416 9.630 108.645 1.00105.32 N
ATOM 15 C8 G A 21 62.116 9.576 109.830 1.00105.25 C
ATOM 16 N7 G A 21 62.828 10.649 110.054 1.00103.92 N
ATOM 17 C5 G A 21 62.575 11.480 108.973 1.00102.82 C
ATOM 18 C6 G A 21 63.048 12.803 108.706 1.00101.21 C
ATOM 19 O6 G A 21 63.784 13.530 109.402 1.00100.31 O
ATOM 20 N1 G A 21 62.578 13.268 107.495 1.00 99.23 N
ATOM 21 C2 G A 21 61.747 12.565 106.649 1.00 99.24 C
ATOM 22 N2 G A 21 61.396 13.158 105.517 1.00 97.51 N
ATOM 23 N3 G A 21 61.286 11.350 106.889 1.00101.08 N
ATOM 24 C4 G A 21 61.739 10.863 108.066 1.00103.27 C
ATOM 25 P U A 22 62.248 4.195 107.818 1.00122.58 P
ATOM 26 OP1 U A 22 62.721 4.035 109.246 1.00121.71 O
ATOM 27 OP2 U A 22 63.183 4.781 106.849 1.00122.88 O
ATOM 28 O5' U A 22 61.677 2.788 107.227 1.00126.62 O
TER
ATOM 1 O3' G B 21 60.850 5.052 107.922 1.00117.85 O
ATOM 2 P U B 22 62.248 4.195 107.818 1.00122.58 P
ATOM 3 OP1 U B 22 62.721 4.035 109.246 1.00121.71 O
ATOM 4 OP2 U B 22 63.183 4.781 106.849 1.00122.88 O
ATOM 5 O5' U B 22 61.677 2.788 107.227 1.00126.62 O
ATOM 6 C5' U B 22 62.326 1.365 107.179 1.00134.08 C
ATOM 7 C4' U B 22 61.326 0.216 107.069 1.00138.87 C
ATOM 8 O4' U B 22 60.644 0.223 108.310 1.00140.55 O
ATOM 9 C3' U B 22 60.178 0.219 105.991 1.00141.04 C
ATOM 10 O3' U B 22 60.504 -0.139 104.629 1.00143.04 O
ATOM 11 C2' U B 22 59.143 -0.760 106.642 1.00141.68 C
ATOM 12 O2' U B 22 59.448 -2.258 106.622 1.00141.76 O
ATOM 13 C1' U B 22 59.339 -0.389 108.133 1.00142.32 C
ATOM 14 N1 U B 22 58.306 0.535 108.598 1.00143.91 N
ATOM 15 C2 U B 22 57.082 0.013 108.811 1.00144.57 C
ATOM 16 O2 U B 22 56.844 -1.197 108.777 1.00144.87 O
ATOM 17 N3 U B 22 56.061 0.896 109.053 1.00144.93 N
ATOM 18 C4 U B 22 56.159 2.251 109.100 1.00144.99 C
ATOM 19 O4 U B 22 55.196 2.986 109.440 1.00145.16 O
ATOM 20 C5 U B 22 57.506 2.715 108.939 1.00144.76 C
ATOM 21 C6 U B 22 58.520 1.866 108.730 1.00144.49 C
ATOM 22 P U B 23 61.980 -0.230 104.142 1.00144.55 P
ATOM 23 OP1 U B 23 62.218 -1.680 104.418 1.00145.07 O
ATOM 24 OP2 U B 23 62.412 0.784 104.992 1.00144.71 O
ATOM 25 O5' U B 23 61.885 -0.099 102.531 1.00144.79 O
TER
Atoms:
OP1: (59.438,7.022,114.006)
OP2: (60.781,8.536,112.414)
C3': (60.932,6.364,108.398)
C1': (60.470,8.637,108.117)
C5': (60.029,6.370,110.754)
O6: (63.784,13.530,109.402)
O4': (59.616,8.153,109.167)
C8: (62.116,9.576,109.830)
C2: (61.747,12.565,106.649)
C6: (63.048,12.803,108.706)
C5: (62.575,11.480,108.973)
C4: (61.739,10.863,108.066)
P: (59.496,7.866,112.760)
C4': (59.769,6.713,109.269)
C2': (60.987,7.432,107.331)
O2': (60.129,7.259,106.252)
N1: (62.578,13.268,107.495)
N2: (61.396,13.158,105.517)
N3: (61.286,11.350,106.889)
N7: (62.828,10.649,110.054)
N9: (61.416,9.630,108.645)
O5': (59.074,6.986,111.514)
O3': (60.850,5.052,107.922)
OP2: (60.781,8.536,112.414)
C3': (60.932,6.364,108.398)
C1': (60.470,8.637,108.117)
C5': (60.029,6.370,110.754)
O6: (63.784,13.530,109.402)
O4': (59.616,8.153,109.167)
C8: (62.116,9.576,109.830)
C2: (61.747,12.565,106.649)
C6: (63.048,12.803,108.706)
C5: (62.575,11.480,108.973)
C4: (61.739,10.863,108.066)
P: (59.496,7.866,112.760)
C4': (59.769,6.713,109.269)
C2': (60.987,7.432,107.331)
O2': (60.129,7.259,106.252)
N1: (62.578,13.268,107.495)
N2: (61.396,13.158,105.517)
N3: (61.286,11.350,106.889)
N7: (62.828,10.649,110.054)
N9: (61.416,9.630,108.645)
O5': (59.074,6.986,111.514)
O3': (60.850,5.052,107.922)
C4: (56.159,2.251,109.100)
N3: (56.061,0.896,109.053)
OP1: (62.721,4.035,109.246)
OP2: (63.183,4.781,106.849)
C2: (57.082,0.013,108.811)
C1': (59.339,-0.389,108.133)
C3': (60.178,0.219,105.991)
O5': (61.677,2.788,107.227)
O4': (60.644,0.223,108.310)
C5': (62.326,1.365,107.179)
P: (62.248,4.195,107.818)
C4': (61.326,0.216,107.069)
C2': (59.143,-0.760,106.642)
O2': (59.448,-2.258,106.622)
N1: (58.306,0.535,108.598)
O4: (55.196,2.986,109.440)
O2: (56.844,-1.197,108.777)
C6: (58.520,1.866,108.730)
C5: (57.506,2.715,108.939)
O3': (60.504,-0.139,104.629)
N3: (56.061,0.896,109.053)
OP1: (62.721,4.035,109.246)
OP2: (63.183,4.781,106.849)
C2: (57.082,0.013,108.811)
C1': (59.339,-0.389,108.133)
C3': (60.178,0.219,105.991)
O5': (61.677,2.788,107.227)
O4': (60.644,0.223,108.310)
C5': (62.326,1.365,107.179)
P: (62.248,4.195,107.818)
C4': (61.326,0.216,107.069)
C2': (59.143,-0.760,106.642)
O2': (59.448,-2.258,106.622)
N1: (58.306,0.535,108.598)
O4: (55.196,2.986,109.440)
O2: (56.844,-1.197,108.777)
C6: (58.520,1.866,108.730)
C5: (57.506,2.715,108.939)
O3': (60.504,-0.139,104.629)
Image (generated by PyMOL):