ClaRNA

Doublet info:

Details

Nucleotide types: GC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQP:0363:0364

Extra

PDB:
ATOM 1 O3' U A 362 93.080 89.805 -4.522 1.00 77.02 O
ATOM 2 P G A 363 93.383 88.747 -3.350 1.00 76.59 P
ATOM 3 OP1 G A 363 94.676 88.086 -3.665 1.00 75.89 O
ATOM 4 OP2 G A 363 92.163 87.918 -3.143 1.00 75.66 O
ATOM 5 O5' G A 363 93.609 89.643 -2.048 1.00 77.23 O
ATOM 6 C5' G A 363 92.525 90.391 -1.450 1.00 76.07 C
ATOM 7 C4' G A 363 92.810 90.644 0.014 1.00 75.84 C
ATOM 8 O4' G A 363 92.828 89.386 0.739 1.00 77.51 O
ATOM 9 C3' G A 363 94.164 91.268 0.317 1.00 75.07 C
ATOM 10 O3' G A 363 94.117 92.676 0.164 1.00 71.00 O
ATOM 11 C2' G A 363 94.396 90.856 1.765 1.00 76.34 C
ATOM 12 O2' G A 363 93.693 91.661 2.694 1.00 75.48 O
ATOM 13 C1' G A 363 93.806 89.443 1.768 1.00 78.06 C
ATOM 14 N9 G A 363 94.801 88.402 1.517 1.00 80.18 N
ATOM 15 C8 G A 363 95.364 88.064 0.307 1.00 80.91 C
ATOM 16 N7 G A 363 96.231 87.092 0.399 1.00 81.94 N
ATOM 17 C5 G A 363 96.242 86.767 1.749 1.00 82.68 C
ATOM 18 C6 G A 363 96.991 85.783 2.456 1.00 83.50 C
ATOM 19 O6 G A 363 97.820 84.974 2.013 1.00 84.11 O
ATOM 20 N1 G A 363 96.693 85.794 3.815 1.00 83.75 N
ATOM 21 C2 G A 363 95.791 86.636 4.419 1.00 83.12 C
ATOM 22 N2 G A 363 95.640 86.486 5.741 1.00 84.57 N
ATOM 23 N3 G A 363 95.089 87.554 3.776 1.00 82.26 N
ATOM 24 C4 G A 363 95.363 87.565 2.453 1.00 81.84 C
ATOM 25 P C A 364 95.269 93.433 -0.655 1.00 68.49 P
ATOM 26 OP1 C A 364 95.314 92.843 -2.020 1.00 68.99 O
ATOM 27 OP2 C A 364 96.504 93.468 0.175 1.00 67.66 O
ATOM 28 O5' C A 364 94.683 94.907 -0.788 1.00 66.14 O
TER

ATOM 1 O3' G B 363 94.117 92.676 0.164 1.00 71.00 O
ATOM 2 P C B 364 95.269 93.433 -0.655 1.00 68.49 P
ATOM 3 OP1 C B 364 95.314 92.843 -2.020 1.00 68.99 O
ATOM 4 OP2 C B 364 96.504 93.468 0.175 1.00 67.66 O
ATOM 5 O5' C B 364 94.683 94.907 -0.788 1.00 66.14 O
ATOM 6 C5' C B 364 95.520 96.018 -1.134 1.00 62.65 C
ATOM 7 C4' C B 364 94.702 97.286 -1.157 1.00 60.93 C
ATOM 8 O4' C B 364 93.660 97.162 -2.161 1.00 59.47 O
ATOM 9 C3' C B 364 93.932 97.585 0.119 1.00 59.67 C
ATOM 10 O3' C B 364 94.747 98.187 1.114 1.00 60.34 O
ATOM 11 C2' C B 364 92.821 98.495 -0.383 1.00 58.74 C
ATOM 12 O2' C B 364 93.243 99.822 -0.622 1.00 57.62 O
ATOM 13 C1' C B 364 92.486 97.827 -1.717 1.00 59.16 C
ATOM 14 N1 C B 364 91.395 96.839 -1.601 1.00 57.63 N
ATOM 15 C2 C B 364 90.088 97.306 -1.417 1.00 57.70 C
ATOM 16 O2 C B 364 89.892 98.529 -1.334 1.00 59.06 O
ATOM 17 N3 C B 364 89.075 96.418 -1.334 1.00 56.22 N
ATOM 18 C4 C B 364 89.323 95.112 -1.417 1.00 55.98 C
ATOM 19 N4 C B 364 88.287 94.276 -1.336 1.00 55.91 N
ATOM 20 C5 C B 364 90.644 94.605 -1.589 1.00 55.46 C
ATOM 21 C6 C B 364 91.641 95.495 -1.674 1.00 56.16 C
ATOM 22 P C B 365 94.390 97.976 2.667 1.00 60.26 P
ATOM 23 OP1 C B 365 95.511 98.575 3.434 1.00 60.75 O
ATOM 24 OP2 C B 365 94.023 96.552 2.898 1.00 61.03 O
ATOM 25 O5' C B 365 93.086 98.866 2.880 1.00 57.41 O
TER

Atoms:
OP1: (94.676,88.086,-3.665)
OP2: (92.163,87.918,-3.143)
C3': (94.164,91.268,0.317)
C1': (93.806,89.443,1.768)
C5': (92.525,90.391,-1.450)
O6: (97.820,84.974,2.013)
O4': (92.828,89.386,0.739)
C8: (95.364,88.064,0.307)
C2: (95.791,86.636,4.419)
C6: (96.991,85.783,2.456)
C5: (96.242,86.767,1.749)
C4: (95.363,87.565,2.453)
P: (93.383,88.747,-3.350)
C4': (92.810,90.644,0.014)
C2': (94.396,90.856,1.765)
O2': (93.693,91.661,2.694)
N1: (96.693,85.794,3.815)
N2: (95.640,86.486,5.741)
N3: (95.089,87.554,3.776)
N7: (96.231,87.092,0.399)
N9: (94.801,88.402,1.517)
O5': (93.609,89.643,-2.048)
O3': (94.117,92.676,0.164)
C2: (90.088,97.306,-1.417)
OP1: (95.314,92.843,-2.020)
OP2: (96.504,93.468,0.175)
C4: (89.323,95.112,-1.417)
O5': (94.683,94.907,-0.788)
C3': (93.932,97.585,0.119)
C1': (92.486,97.827,-1.717)
O4': (93.660,97.162,-2.161)
C5': (95.520,96.018,-1.134)
P: (95.269,93.433,-0.655)
O2: (89.892,98.529,-1.334)
C4': (94.702,97.286,-1.157)
C2': (92.821,98.495,-0.383)
O2': (93.243,99.822,-0.622)
N1: (91.395,96.839,-1.601)
N3: (89.075,96.418,-1.334)
N4: (88.287,94.276,-1.336)
C6: (91.641,95.495,-1.674)
C5: (90.644,94.605,-1.589)
O3': (94.747,98.187,1.114)
Image (generated by PyMOL):
PyMOL image
show in jmol