Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:0363:0364
Extra
PDB:
ATOM 1 O3' U A 362 93.714 90.792 -4.255 1.00 76.52 O
ATOM 2 P G A 363 94.157 89.761 -3.101 1.00 77.13 P
ATOM 3 OP1 G A 363 95.528 89.291 -3.415 1.00 76.33 O
ATOM 4 OP2 G A 363 93.062 88.765 -2.921 1.00 76.07 O
ATOM 5 O5' G A 363 94.272 90.661 -1.789 1.00 77.94 O
ATOM 6 C5' G A 363 93.128 91.355 -1.239 1.00 77.66 C
ATOM 7 C4' G A 363 93.348 91.628 0.233 1.00 77.42 C
ATOM 8 O4' G A 363 93.384 90.373 0.968 1.00 78.40 O
ATOM 9 C3' G A 363 94.672 92.293 0.582 1.00 76.96 C
ATOM 10 O3' G A 363 94.617 93.701 0.402 1.00 74.49 O
ATOM 11 C2' G A 363 94.860 91.905 2.043 1.00 77.69 C
ATOM 12 O2' G A 363 94.122 92.712 2.943 1.00 77.20 O
ATOM 13 C1' G A 363 94.305 90.477 2.045 1.00 78.18 C
ATOM 14 N9 G A 363 95.350 89.473 1.868 1.00 78.45 N
ATOM 15 C8 G A 363 96.019 89.159 0.708 1.00 79.05 C
ATOM 16 N7 G A 363 96.928 88.237 0.874 1.00 79.53 N
ATOM 17 C5 G A 363 96.850 87.917 2.222 1.00 79.57 C
ATOM 18 C6 G A 363 97.595 86.985 2.990 1.00 79.83 C
ATOM 19 O6 G A 363 98.508 86.234 2.620 1.00 80.14 O
ATOM 20 N1 G A 363 97.186 86.977 4.321 1.00 79.48 N
ATOM 21 C2 G A 363 96.188 87.764 4.845 1.00 79.06 C
ATOM 22 N2 G A 363 95.930 87.604 6.151 1.00 79.40 N
ATOM 23 N3 G A 363 95.493 88.640 4.142 1.00 78.76 N
ATOM 24 C4 G A 363 95.874 88.664 2.848 1.00 78.81 C
ATOM 25 P C A 364 95.860 94.475 -0.258 1.00 71.58 P
ATOM 26 OP1 C A 364 96.202 93.761 -1.515 1.00 72.25 O
ATOM 27 OP2 C A 364 96.914 94.694 0.772 1.00 70.45 O
ATOM 28 O5' C A 364 95.215 95.875 -0.647 1.00 67.75 O
TER
ATOM 1 O3' G B 363 94.617 93.701 0.402 1.00 74.49 O
ATOM 2 P C B 364 95.860 94.475 -0.258 1.00 71.58 P
ATOM 3 OP1 C B 364 96.202 93.761 -1.515 1.00 72.25 O
ATOM 4 OP2 C B 364 96.914 94.694 0.772 1.00 70.45 O
ATOM 5 O5' C B 364 95.215 95.875 -0.647 1.00 67.75 O
ATOM 6 C5' C B 364 96.022 97.027 -0.897 1.00 62.64 C
ATOM 7 C4' C B 364 95.165 98.262 -0.844 1.00 60.99 C
ATOM 8 O4' C B 364 94.074 98.115 -1.792 1.00 60.21 O
ATOM 9 C3' C B 364 94.453 98.493 0.477 1.00 60.94 C
ATOM 10 O3' C B 364 95.308 99.105 1.438 1.00 61.73 O
ATOM 11 C2' C B 364 93.280 99.371 0.063 1.00 59.90 C
ATOM 12 O2' C B 364 93.632 100.723 -0.152 1.00 58.33 O
ATOM 13 C1' C B 364 92.911 98.748 -1.282 1.00 59.75 C
ATOM 14 N1 C B 364 91.809 97.765 -1.211 1.00 59.36 N
ATOM 15 C2 C B 364 90.502 98.243 -1.057 1.00 59.39 C
ATOM 16 O2 C B 364 90.318 99.462 -0.948 1.00 60.55 O
ATOM 17 N3 C B 364 89.472 97.369 -1.033 1.00 59.06 N
ATOM 18 C4 C B 364 89.704 96.062 -1.149 1.00 58.55 C
ATOM 19 N4 C B 364 88.648 95.242 -1.140 1.00 56.71 N
ATOM 20 C5 C B 364 91.027 95.539 -1.285 1.00 57.60 C
ATOM 21 C6 C B 364 92.041 96.419 -1.308 1.00 58.40 C
ATOM 22 P C B 365 94.992 98.935 3.006 1.00 62.37 P
ATOM 23 OP1 C B 365 96.124 99.566 3.738 1.00 61.73 O
ATOM 24 OP2 C B 365 94.640 97.511 3.284 1.00 62.17 O
ATOM 25 O5' C B 365 93.689 99.827 3.219 1.00 58.80 O
TER
ATOM 2 P G A 363 94.157 89.761 -3.101 1.00 77.13 P
ATOM 3 OP1 G A 363 95.528 89.291 -3.415 1.00 76.33 O
ATOM 4 OP2 G A 363 93.062 88.765 -2.921 1.00 76.07 O
ATOM 5 O5' G A 363 94.272 90.661 -1.789 1.00 77.94 O
ATOM 6 C5' G A 363 93.128 91.355 -1.239 1.00 77.66 C
ATOM 7 C4' G A 363 93.348 91.628 0.233 1.00 77.42 C
ATOM 8 O4' G A 363 93.384 90.373 0.968 1.00 78.40 O
ATOM 9 C3' G A 363 94.672 92.293 0.582 1.00 76.96 C
ATOM 10 O3' G A 363 94.617 93.701 0.402 1.00 74.49 O
ATOM 11 C2' G A 363 94.860 91.905 2.043 1.00 77.69 C
ATOM 12 O2' G A 363 94.122 92.712 2.943 1.00 77.20 O
ATOM 13 C1' G A 363 94.305 90.477 2.045 1.00 78.18 C
ATOM 14 N9 G A 363 95.350 89.473 1.868 1.00 78.45 N
ATOM 15 C8 G A 363 96.019 89.159 0.708 1.00 79.05 C
ATOM 16 N7 G A 363 96.928 88.237 0.874 1.00 79.53 N
ATOM 17 C5 G A 363 96.850 87.917 2.222 1.00 79.57 C
ATOM 18 C6 G A 363 97.595 86.985 2.990 1.00 79.83 C
ATOM 19 O6 G A 363 98.508 86.234 2.620 1.00 80.14 O
ATOM 20 N1 G A 363 97.186 86.977 4.321 1.00 79.48 N
ATOM 21 C2 G A 363 96.188 87.764 4.845 1.00 79.06 C
ATOM 22 N2 G A 363 95.930 87.604 6.151 1.00 79.40 N
ATOM 23 N3 G A 363 95.493 88.640 4.142 1.00 78.76 N
ATOM 24 C4 G A 363 95.874 88.664 2.848 1.00 78.81 C
ATOM 25 P C A 364 95.860 94.475 -0.258 1.00 71.58 P
ATOM 26 OP1 C A 364 96.202 93.761 -1.515 1.00 72.25 O
ATOM 27 OP2 C A 364 96.914 94.694 0.772 1.00 70.45 O
ATOM 28 O5' C A 364 95.215 95.875 -0.647 1.00 67.75 O
TER
ATOM 1 O3' G B 363 94.617 93.701 0.402 1.00 74.49 O
ATOM 2 P C B 364 95.860 94.475 -0.258 1.00 71.58 P
ATOM 3 OP1 C B 364 96.202 93.761 -1.515 1.00 72.25 O
ATOM 4 OP2 C B 364 96.914 94.694 0.772 1.00 70.45 O
ATOM 5 O5' C B 364 95.215 95.875 -0.647 1.00 67.75 O
ATOM 6 C5' C B 364 96.022 97.027 -0.897 1.00 62.64 C
ATOM 7 C4' C B 364 95.165 98.262 -0.844 1.00 60.99 C
ATOM 8 O4' C B 364 94.074 98.115 -1.792 1.00 60.21 O
ATOM 9 C3' C B 364 94.453 98.493 0.477 1.00 60.94 C
ATOM 10 O3' C B 364 95.308 99.105 1.438 1.00 61.73 O
ATOM 11 C2' C B 364 93.280 99.371 0.063 1.00 59.90 C
ATOM 12 O2' C B 364 93.632 100.723 -0.152 1.00 58.33 O
ATOM 13 C1' C B 364 92.911 98.748 -1.282 1.00 59.75 C
ATOM 14 N1 C B 364 91.809 97.765 -1.211 1.00 59.36 N
ATOM 15 C2 C B 364 90.502 98.243 -1.057 1.00 59.39 C
ATOM 16 O2 C B 364 90.318 99.462 -0.948 1.00 60.55 O
ATOM 17 N3 C B 364 89.472 97.369 -1.033 1.00 59.06 N
ATOM 18 C4 C B 364 89.704 96.062 -1.149 1.00 58.55 C
ATOM 19 N4 C B 364 88.648 95.242 -1.140 1.00 56.71 N
ATOM 20 C5 C B 364 91.027 95.539 -1.285 1.00 57.60 C
ATOM 21 C6 C B 364 92.041 96.419 -1.308 1.00 58.40 C
ATOM 22 P C B 365 94.992 98.935 3.006 1.00 62.37 P
ATOM 23 OP1 C B 365 96.124 99.566 3.738 1.00 61.73 O
ATOM 24 OP2 C B 365 94.640 97.511 3.284 1.00 62.17 O
ATOM 25 O5' C B 365 93.689 99.827 3.219 1.00 58.80 O
TER
Atoms:
OP1: (95.528,89.291,-3.415)
OP2: (93.062,88.765,-2.921)
C3': (94.672,92.293,0.582)
C1': (94.305,90.477,2.045)
C5': (93.128,91.355,-1.239)
O6: (98.508,86.234,2.620)
O4': (93.384,90.373,0.968)
C8: (96.019,89.159,0.708)
C2: (96.188,87.764,4.845)
C6: (97.595,86.985,2.990)
C5: (96.850,87.917,2.222)
C4: (95.874,88.664,2.848)
P: (94.157,89.761,-3.101)
C4': (93.348,91.628,0.233)
C2': (94.860,91.905,2.043)
O2': (94.122,92.712,2.943)
N1: (97.186,86.977,4.321)
N2: (95.930,87.604,6.151)
N3: (95.493,88.640,4.142)
N7: (96.928,88.237,0.874)
N9: (95.350,89.473,1.868)
O5': (94.272,90.661,-1.789)
O3': (94.617,93.701,0.402)
OP2: (93.062,88.765,-2.921)
C3': (94.672,92.293,0.582)
C1': (94.305,90.477,2.045)
C5': (93.128,91.355,-1.239)
O6: (98.508,86.234,2.620)
O4': (93.384,90.373,0.968)
C8: (96.019,89.159,0.708)
C2: (96.188,87.764,4.845)
C6: (97.595,86.985,2.990)
C5: (96.850,87.917,2.222)
C4: (95.874,88.664,2.848)
P: (94.157,89.761,-3.101)
C4': (93.348,91.628,0.233)
C2': (94.860,91.905,2.043)
O2': (94.122,92.712,2.943)
N1: (97.186,86.977,4.321)
N2: (95.930,87.604,6.151)
N3: (95.493,88.640,4.142)
N7: (96.928,88.237,0.874)
N9: (95.350,89.473,1.868)
O5': (94.272,90.661,-1.789)
O3': (94.617,93.701,0.402)
C2: (90.502,98.243,-1.057)
OP1: (96.202,93.761,-1.515)
OP2: (96.914,94.694,0.772)
C4: (89.704,96.062,-1.149)
O5': (95.215,95.875,-0.647)
C3': (94.453,98.493,0.477)
C1': (92.911,98.748,-1.282)
O4': (94.074,98.115,-1.792)
C5': (96.022,97.027,-0.897)
P: (95.860,94.475,-0.258)
O2: (90.318,99.462,-0.948)
C4': (95.165,98.262,-0.844)
C2': (93.280,99.371,0.063)
O2': (93.632,100.723,-0.152)
N1: (91.809,97.765,-1.211)
N3: (89.472,97.369,-1.033)
N4: (88.648,95.242,-1.140)
C6: (92.041,96.419,-1.308)
C5: (91.027,95.539,-1.285)
O3': (95.308,99.105,1.438)
OP1: (96.202,93.761,-1.515)
OP2: (96.914,94.694,0.772)
C4: (89.704,96.062,-1.149)
O5': (95.215,95.875,-0.647)
C3': (94.453,98.493,0.477)
C1': (92.911,98.748,-1.282)
O4': (94.074,98.115,-1.792)
C5': (96.022,97.027,-0.897)
P: (95.860,94.475,-0.258)
O2: (90.318,99.462,-0.948)
C4': (95.165,98.262,-0.844)
C2': (93.280,99.371,0.063)
O2': (93.632,100.723,-0.152)
N1: (91.809,97.765,-1.211)
N3: (89.472,97.369,-1.033)
N4: (88.648,95.242,-1.140)
C6: (92.041,96.419,-1.308)
C5: (91.027,95.539,-1.285)
O3': (95.308,99.105,1.438)
Image (generated by PyMOL):