Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:0363:0364
Extra
PDB:
ATOM 1 O3' U A 362 94.093 90.936 -3.945 1.00 93.29 O
ATOM 2 P G A 363 94.500 89.831 -2.848 1.00 93.88 P
ATOM 3 OP1 G A 363 95.860 89.326 -3.177 1.00 92.89 O
ATOM 4 OP2 G A 363 93.372 88.867 -2.722 1.00 94.48 O
ATOM 5 O5' G A 363 94.628 90.649 -1.484 1.00 93.73 O
ATOM 6 C5' G A 363 93.490 91.301 -0.872 1.00 91.80 C
ATOM 7 C4' G A 363 93.795 91.623 0.578 1.00 90.72 C
ATOM 8 O4' G A 363 93.895 90.394 1.353 1.00 91.36 O
ATOM 9 C3' G A 363 95.125 92.325 0.821 1.00 89.68 C
ATOM 10 O3' G A 363 95.023 93.726 0.611 1.00 85.94 O
ATOM 11 C2' G A 363 95.426 91.973 2.274 1.00 90.81 C
ATOM 12 O2' G A 363 94.747 92.783 3.214 1.00 91.73 O
ATOM 13 C1' G A 363 94.896 90.539 2.351 1.00 91.50 C
ATOM 14 N9 G A 363 95.941 89.553 2.100 1.00 92.38 N
ATOM 15 C8 G A 363 96.607 89.335 0.915 1.00 93.24 C
ATOM 16 N7 G A 363 97.501 88.389 0.996 1.00 94.10 N
ATOM 17 C5 G A 363 97.420 87.953 2.311 1.00 93.91 C
ATOM 18 C6 G A 363 98.149 86.945 2.984 1.00 94.21 C
ATOM 19 O6 G A 363 99.040 86.210 2.534 1.00 94.78 O
ATOM 20 N1 G A 363 97.750 86.829 4.315 1.00 94.14 N
ATOM 21 C2 G A 363 96.772 87.588 4.918 1.00 93.44 C
ATOM 22 N2 G A 363 96.525 87.323 6.212 1.00 93.29 N
ATOM 23 N3 G A 363 96.085 88.534 4.297 1.00 92.71 N
ATOM 24 C4 G A 363 96.459 88.661 3.006 1.00 93.01 C
ATOM 25 P C A 364 96.261 94.536 -0.009 1.00 81.74 P
ATOM 26 OP1 C A 364 96.428 94.055 -1.402 1.00 82.56 O
ATOM 27 OP2 C A 364 97.413 94.482 0.935 1.00 80.75 O
ATOM 28 O5' C A 364 95.704 96.022 -0.071 1.00 78.95 O
TER
ATOM 1 O3' G B 363 95.023 93.726 0.611 1.00 85.94 O
ATOM 2 P C B 364 96.261 94.536 -0.009 1.00 81.74 P
ATOM 3 OP1 C B 364 96.428 94.055 -1.402 1.00 82.56 O
ATOM 4 OP2 C B 364 97.413 94.482 0.935 1.00 80.75 O
ATOM 5 O5' C B 364 95.704 96.022 -0.071 1.00 78.95 O
ATOM 6 C5' C B 364 96.542 97.118 -0.440 1.00 76.33 C
ATOM 7 C4' C B 364 95.724 98.381 -0.498 1.00 76.05 C
ATOM 8 O4' C B 364 94.697 98.235 -1.515 1.00 75.24 O
ATOM 9 C3' C B 364 94.935 98.690 0.762 1.00 76.11 C
ATOM 10 O3' C B 364 95.739 99.307 1.762 1.00 76.99 O
ATOM 11 C2' C B 364 93.823 99.583 0.232 1.00 75.57 C
ATOM 12 O2' C B 364 94.238 100.911 -0.021 1.00 75.64 O
ATOM 13 C1' C B 364 93.514 98.897 -1.098 1.00 74.94 C
ATOM 14 N1 C B 364 92.425 97.907 -1.002 1.00 74.88 N
ATOM 15 C2 C B 364 91.108 98.371 -0.930 1.00 75.10 C
ATOM 16 O2 C B 364 90.902 99.593 -0.920 1.00 75.56 O
ATOM 17 N3 C B 364 90.092 97.480 -0.878 1.00 74.97 N
ATOM 18 C4 C B 364 90.351 96.173 -0.905 1.00 74.79 C
ATOM 19 N4 C B 364 89.313 95.335 -0.900 1.00 74.30 N
ATOM 20 C5 C B 364 91.685 95.668 -0.951 1.00 74.55 C
ATOM 21 C6 C B 364 92.683 96.563 -0.995 1.00 74.56 C
ATOM 22 P C B 365 95.357 99.126 3.314 1.00 76.35 P
ATOM 23 OP1 C B 365 96.427 99.802 4.094 1.00 76.95 O
ATOM 24 OP2 C B 365 95.051 97.690 3.582 1.00 76.67 O
ATOM 25 O5' C B 365 94.018 99.973 3.462 1.00 73.76 O
TER
ATOM 2 P G A 363 94.500 89.831 -2.848 1.00 93.88 P
ATOM 3 OP1 G A 363 95.860 89.326 -3.177 1.00 92.89 O
ATOM 4 OP2 G A 363 93.372 88.867 -2.722 1.00 94.48 O
ATOM 5 O5' G A 363 94.628 90.649 -1.484 1.00 93.73 O
ATOM 6 C5' G A 363 93.490 91.301 -0.872 1.00 91.80 C
ATOM 7 C4' G A 363 93.795 91.623 0.578 1.00 90.72 C
ATOM 8 O4' G A 363 93.895 90.394 1.353 1.00 91.36 O
ATOM 9 C3' G A 363 95.125 92.325 0.821 1.00 89.68 C
ATOM 10 O3' G A 363 95.023 93.726 0.611 1.00 85.94 O
ATOM 11 C2' G A 363 95.426 91.973 2.274 1.00 90.81 C
ATOM 12 O2' G A 363 94.747 92.783 3.214 1.00 91.73 O
ATOM 13 C1' G A 363 94.896 90.539 2.351 1.00 91.50 C
ATOM 14 N9 G A 363 95.941 89.553 2.100 1.00 92.38 N
ATOM 15 C8 G A 363 96.607 89.335 0.915 1.00 93.24 C
ATOM 16 N7 G A 363 97.501 88.389 0.996 1.00 94.10 N
ATOM 17 C5 G A 363 97.420 87.953 2.311 1.00 93.91 C
ATOM 18 C6 G A 363 98.149 86.945 2.984 1.00 94.21 C
ATOM 19 O6 G A 363 99.040 86.210 2.534 1.00 94.78 O
ATOM 20 N1 G A 363 97.750 86.829 4.315 1.00 94.14 N
ATOM 21 C2 G A 363 96.772 87.588 4.918 1.00 93.44 C
ATOM 22 N2 G A 363 96.525 87.323 6.212 1.00 93.29 N
ATOM 23 N3 G A 363 96.085 88.534 4.297 1.00 92.71 N
ATOM 24 C4 G A 363 96.459 88.661 3.006 1.00 93.01 C
ATOM 25 P C A 364 96.261 94.536 -0.009 1.00 81.74 P
ATOM 26 OP1 C A 364 96.428 94.055 -1.402 1.00 82.56 O
ATOM 27 OP2 C A 364 97.413 94.482 0.935 1.00 80.75 O
ATOM 28 O5' C A 364 95.704 96.022 -0.071 1.00 78.95 O
TER
ATOM 1 O3' G B 363 95.023 93.726 0.611 1.00 85.94 O
ATOM 2 P C B 364 96.261 94.536 -0.009 1.00 81.74 P
ATOM 3 OP1 C B 364 96.428 94.055 -1.402 1.00 82.56 O
ATOM 4 OP2 C B 364 97.413 94.482 0.935 1.00 80.75 O
ATOM 5 O5' C B 364 95.704 96.022 -0.071 1.00 78.95 O
ATOM 6 C5' C B 364 96.542 97.118 -0.440 1.00 76.33 C
ATOM 7 C4' C B 364 95.724 98.381 -0.498 1.00 76.05 C
ATOM 8 O4' C B 364 94.697 98.235 -1.515 1.00 75.24 O
ATOM 9 C3' C B 364 94.935 98.690 0.762 1.00 76.11 C
ATOM 10 O3' C B 364 95.739 99.307 1.762 1.00 76.99 O
ATOM 11 C2' C B 364 93.823 99.583 0.232 1.00 75.57 C
ATOM 12 O2' C B 364 94.238 100.911 -0.021 1.00 75.64 O
ATOM 13 C1' C B 364 93.514 98.897 -1.098 1.00 74.94 C
ATOM 14 N1 C B 364 92.425 97.907 -1.002 1.00 74.88 N
ATOM 15 C2 C B 364 91.108 98.371 -0.930 1.00 75.10 C
ATOM 16 O2 C B 364 90.902 99.593 -0.920 1.00 75.56 O
ATOM 17 N3 C B 364 90.092 97.480 -0.878 1.00 74.97 N
ATOM 18 C4 C B 364 90.351 96.173 -0.905 1.00 74.79 C
ATOM 19 N4 C B 364 89.313 95.335 -0.900 1.00 74.30 N
ATOM 20 C5 C B 364 91.685 95.668 -0.951 1.00 74.55 C
ATOM 21 C6 C B 364 92.683 96.563 -0.995 1.00 74.56 C
ATOM 22 P C B 365 95.357 99.126 3.314 1.00 76.35 P
ATOM 23 OP1 C B 365 96.427 99.802 4.094 1.00 76.95 O
ATOM 24 OP2 C B 365 95.051 97.690 3.582 1.00 76.67 O
ATOM 25 O5' C B 365 94.018 99.973 3.462 1.00 73.76 O
TER
Atoms:
OP1: (95.860,89.326,-3.177)
OP2: (93.372,88.867,-2.722)
C3': (95.125,92.325,0.821)
C1': (94.896,90.539,2.351)
C5': (93.490,91.301,-0.872)
O6: (99.040,86.210,2.534)
O4': (93.895,90.394,1.353)
C8: (96.607,89.335,0.915)
C2: (96.772,87.588,4.918)
C6: (98.149,86.945,2.984)
C5: (97.420,87.953,2.311)
C4: (96.459,88.661,3.006)
P: (94.500,89.831,-2.848)
C4': (93.795,91.623,0.578)
C2': (95.426,91.973,2.274)
O2': (94.747,92.783,3.214)
N1: (97.750,86.829,4.315)
N2: (96.525,87.323,6.212)
N3: (96.085,88.534,4.297)
N7: (97.501,88.389,0.996)
N9: (95.941,89.553,2.100)
O5': (94.628,90.649,-1.484)
O3': (95.023,93.726,0.611)
OP2: (93.372,88.867,-2.722)
C3': (95.125,92.325,0.821)
C1': (94.896,90.539,2.351)
C5': (93.490,91.301,-0.872)
O6: (99.040,86.210,2.534)
O4': (93.895,90.394,1.353)
C8: (96.607,89.335,0.915)
C2: (96.772,87.588,4.918)
C6: (98.149,86.945,2.984)
C5: (97.420,87.953,2.311)
C4: (96.459,88.661,3.006)
P: (94.500,89.831,-2.848)
C4': (93.795,91.623,0.578)
C2': (95.426,91.973,2.274)
O2': (94.747,92.783,3.214)
N1: (97.750,86.829,4.315)
N2: (96.525,87.323,6.212)
N3: (96.085,88.534,4.297)
N7: (97.501,88.389,0.996)
N9: (95.941,89.553,2.100)
O5': (94.628,90.649,-1.484)
O3': (95.023,93.726,0.611)
C2: (91.108,98.371,-0.930)
OP1: (96.428,94.055,-1.402)
OP2: (97.413,94.482,0.935)
C4: (90.351,96.173,-0.905)
O5': (95.704,96.022,-0.071)
C3': (94.935,98.690,0.762)
C1': (93.514,98.897,-1.098)
O4': (94.697,98.235,-1.515)
C5': (96.542,97.118,-0.440)
P: (96.261,94.536,-0.009)
O2: (90.902,99.593,-0.920)
C4': (95.724,98.381,-0.498)
C2': (93.823,99.583,0.232)
O2': (94.238,100.911,-0.021)
N1: (92.425,97.907,-1.002)
N3: (90.092,97.480,-0.878)
N4: (89.313,95.335,-0.900)
C6: (92.683,96.563,-0.995)
C5: (91.685,95.668,-0.951)
O3': (95.739,99.307,1.762)
OP1: (96.428,94.055,-1.402)
OP2: (97.413,94.482,0.935)
C4: (90.351,96.173,-0.905)
O5': (95.704,96.022,-0.071)
C3': (94.935,98.690,0.762)
C1': (93.514,98.897,-1.098)
O4': (94.697,98.235,-1.515)
C5': (96.542,97.118,-0.440)
P: (96.261,94.536,-0.009)
O2: (90.902,99.593,-0.920)
C4': (95.724,98.381,-0.498)
C2': (93.823,99.583,0.232)
O2': (94.238,100.911,-0.021)
N1: (92.425,97.907,-1.002)
N3: (90.092,97.480,-0.878)
N4: (89.313,95.335,-0.900)
C6: (92.683,96.563,-0.995)
C5: (91.685,95.668,-0.951)
O3': (95.739,99.307,1.762)
Image (generated by PyMOL):