Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:0363:0364
Extra
PDB:
ATOM 1 O3' U A 362 93.691 90.665 -4.342 1.00 81.39 O
ATOM 2 P G A 363 94.104 89.643 -3.167 1.00 82.01 P
ATOM 3 OP1 G A 363 95.450 89.102 -3.472 1.00 82.27 O
ATOM 4 OP2 G A 363 92.973 88.697 -2.956 1.00 82.15 O
ATOM 5 O5' G A 363 94.274 90.570 -1.878 1.00 81.94 O
ATOM 6 C5' G A 363 93.154 91.268 -1.282 1.00 80.35 C
ATOM 7 C4' G A 363 93.424 91.517 0.187 1.00 79.49 C
ATOM 8 O4' G A 363 93.481 90.247 0.892 1.00 79.71 O
ATOM 9 C3' G A 363 94.763 92.176 0.495 1.00 78.97 C
ATOM 10 O3' G A 363 94.687 93.591 0.374 1.00 76.42 O
ATOM 11 C2' G A 363 95.042 91.731 1.927 1.00 79.71 C
ATOM 12 O2' G A 363 94.404 92.511 2.920 1.00 80.45 O
ATOM 13 C1' G A 363 94.455 90.317 1.923 1.00 79.94 C
ATOM 14 N9 G A 363 95.466 89.292 1.688 1.00 80.03 N
ATOM 15 C8 G A 363 96.057 88.957 0.493 1.00 80.40 C
ATOM 16 N7 G A 363 96.956 88.018 0.613 1.00 81.07 N
ATOM 17 C5 G A 363 96.952 87.712 1.966 1.00 81.08 C
ATOM 18 C6 G A 363 97.724 86.775 2.696 1.00 81.75 C
ATOM 19 O6 G A 363 98.600 86.004 2.280 1.00 82.15 O
ATOM 20 N1 G A 363 97.396 86.789 4.049 1.00 81.98 N
ATOM 21 C2 G A 363 96.448 87.600 4.625 1.00 81.24 C
ATOM 22 N2 G A 363 96.272 87.462 5.945 1.00 82.20 N
ATOM 23 N3 G A 363 95.727 88.479 3.956 1.00 80.77 N
ATOM 24 C4 G A 363 96.030 88.483 2.641 1.00 80.56 C
ATOM 25 P C A 364 95.936 94.413 -0.208 1.00 73.46 P
ATOM 26 OP1 C A 364 96.325 93.752 -1.476 1.00 74.77 O
ATOM 27 OP2 C A 364 96.949 94.601 0.863 1.00 73.71 O
ATOM 28 O5' C A 364 95.297 95.827 -0.562 1.00 70.61 O
TER
ATOM 1 O3' G B 363 94.687 93.591 0.374 1.00 76.42 O
ATOM 2 P C B 364 95.936 94.413 -0.208 1.00 73.46 P
ATOM 3 OP1 C B 364 96.325 93.752 -1.476 1.00 74.77 O
ATOM 4 OP2 C B 364 96.949 94.601 0.863 1.00 73.71 O
ATOM 5 O5' C B 364 95.297 95.827 -0.562 1.00 70.61 O
ATOM 6 C5' C B 364 96.118 96.949 -0.916 1.00 66.37 C
ATOM 7 C4' C B 364 95.304 98.217 -0.847 1.00 64.20 C
ATOM 8 O4' C B 364 94.238 98.153 -1.826 1.00 62.60 O
ATOM 9 C3' C B 364 94.586 98.436 0.475 1.00 63.67 C
ATOM 10 O3' C B 364 95.449 99.028 1.446 1.00 64.47 O
ATOM 11 C2' C B 364 93.424 99.330 0.072 1.00 62.55 C
ATOM 12 O2' C B 364 93.788 100.682 -0.093 1.00 62.78 O
ATOM 13 C1' C B 364 93.068 98.747 -1.294 1.00 62.36 C
ATOM 14 N1 C B 364 92.005 97.727 -1.228 1.00 62.95 N
ATOM 15 C2 C B 364 90.674 98.156 -1.146 1.00 63.79 C
ATOM 16 O2 C B 364 90.437 99.375 -1.105 1.00 65.19 O
ATOM 17 N3 C B 364 89.680 97.238 -1.118 1.00 63.21 N
ATOM 18 C4 C B 364 89.971 95.939 -1.172 1.00 61.96 C
ATOM 19 N4 C B 364 88.952 95.076 -1.183 1.00 60.54 N
ATOM 20 C5 C B 364 91.320 95.469 -1.229 1.00 61.67 C
ATOM 21 C6 C B 364 92.295 96.388 -1.253 1.00 62.09 C
ATOM 22 P C B 365 95.122 98.870 3.013 1.00 62.72 P
ATOM 23 OP1 C B 365 96.230 99.539 3.730 1.00 64.00 O
ATOM 24 OP2 C B 365 94.806 97.450 3.319 1.00 62.99 O
ATOM 25 O5' C B 365 93.810 99.750 3.205 1.00 62.35 O
TER
ATOM 2 P G A 363 94.104 89.643 -3.167 1.00 82.01 P
ATOM 3 OP1 G A 363 95.450 89.102 -3.472 1.00 82.27 O
ATOM 4 OP2 G A 363 92.973 88.697 -2.956 1.00 82.15 O
ATOM 5 O5' G A 363 94.274 90.570 -1.878 1.00 81.94 O
ATOM 6 C5' G A 363 93.154 91.268 -1.282 1.00 80.35 C
ATOM 7 C4' G A 363 93.424 91.517 0.187 1.00 79.49 C
ATOM 8 O4' G A 363 93.481 90.247 0.892 1.00 79.71 O
ATOM 9 C3' G A 363 94.763 92.176 0.495 1.00 78.97 C
ATOM 10 O3' G A 363 94.687 93.591 0.374 1.00 76.42 O
ATOM 11 C2' G A 363 95.042 91.731 1.927 1.00 79.71 C
ATOM 12 O2' G A 363 94.404 92.511 2.920 1.00 80.45 O
ATOM 13 C1' G A 363 94.455 90.317 1.923 1.00 79.94 C
ATOM 14 N9 G A 363 95.466 89.292 1.688 1.00 80.03 N
ATOM 15 C8 G A 363 96.057 88.957 0.493 1.00 80.40 C
ATOM 16 N7 G A 363 96.956 88.018 0.613 1.00 81.07 N
ATOM 17 C5 G A 363 96.952 87.712 1.966 1.00 81.08 C
ATOM 18 C6 G A 363 97.724 86.775 2.696 1.00 81.75 C
ATOM 19 O6 G A 363 98.600 86.004 2.280 1.00 82.15 O
ATOM 20 N1 G A 363 97.396 86.789 4.049 1.00 81.98 N
ATOM 21 C2 G A 363 96.448 87.600 4.625 1.00 81.24 C
ATOM 22 N2 G A 363 96.272 87.462 5.945 1.00 82.20 N
ATOM 23 N3 G A 363 95.727 88.479 3.956 1.00 80.77 N
ATOM 24 C4 G A 363 96.030 88.483 2.641 1.00 80.56 C
ATOM 25 P C A 364 95.936 94.413 -0.208 1.00 73.46 P
ATOM 26 OP1 C A 364 96.325 93.752 -1.476 1.00 74.77 O
ATOM 27 OP2 C A 364 96.949 94.601 0.863 1.00 73.71 O
ATOM 28 O5' C A 364 95.297 95.827 -0.562 1.00 70.61 O
TER
ATOM 1 O3' G B 363 94.687 93.591 0.374 1.00 76.42 O
ATOM 2 P C B 364 95.936 94.413 -0.208 1.00 73.46 P
ATOM 3 OP1 C B 364 96.325 93.752 -1.476 1.00 74.77 O
ATOM 4 OP2 C B 364 96.949 94.601 0.863 1.00 73.71 O
ATOM 5 O5' C B 364 95.297 95.827 -0.562 1.00 70.61 O
ATOM 6 C5' C B 364 96.118 96.949 -0.916 1.00 66.37 C
ATOM 7 C4' C B 364 95.304 98.217 -0.847 1.00 64.20 C
ATOM 8 O4' C B 364 94.238 98.153 -1.826 1.00 62.60 O
ATOM 9 C3' C B 364 94.586 98.436 0.475 1.00 63.67 C
ATOM 10 O3' C B 364 95.449 99.028 1.446 1.00 64.47 O
ATOM 11 C2' C B 364 93.424 99.330 0.072 1.00 62.55 C
ATOM 12 O2' C B 364 93.788 100.682 -0.093 1.00 62.78 O
ATOM 13 C1' C B 364 93.068 98.747 -1.294 1.00 62.36 C
ATOM 14 N1 C B 364 92.005 97.727 -1.228 1.00 62.95 N
ATOM 15 C2 C B 364 90.674 98.156 -1.146 1.00 63.79 C
ATOM 16 O2 C B 364 90.437 99.375 -1.105 1.00 65.19 O
ATOM 17 N3 C B 364 89.680 97.238 -1.118 1.00 63.21 N
ATOM 18 C4 C B 364 89.971 95.939 -1.172 1.00 61.96 C
ATOM 19 N4 C B 364 88.952 95.076 -1.183 1.00 60.54 N
ATOM 20 C5 C B 364 91.320 95.469 -1.229 1.00 61.67 C
ATOM 21 C6 C B 364 92.295 96.388 -1.253 1.00 62.09 C
ATOM 22 P C B 365 95.122 98.870 3.013 1.00 62.72 P
ATOM 23 OP1 C B 365 96.230 99.539 3.730 1.00 64.00 O
ATOM 24 OP2 C B 365 94.806 97.450 3.319 1.00 62.99 O
ATOM 25 O5' C B 365 93.810 99.750 3.205 1.00 62.35 O
TER
Atoms:
OP1: (95.450,89.102,-3.472)
OP2: (92.973,88.697,-2.956)
C3': (94.763,92.176,0.495)
C1': (94.455,90.317,1.923)
C5': (93.154,91.268,-1.282)
O6: (98.600,86.004,2.280)
O4': (93.481,90.247,0.892)
C8: (96.057,88.957,0.493)
C2: (96.448,87.600,4.625)
C6: (97.724,86.775,2.696)
C5: (96.952,87.712,1.966)
C4: (96.030,88.483,2.641)
P: (94.104,89.643,-3.167)
C4': (93.424,91.517,0.187)
C2': (95.042,91.731,1.927)
O2': (94.404,92.511,2.920)
N1: (97.396,86.789,4.049)
N2: (96.272,87.462,5.945)
N3: (95.727,88.479,3.956)
N7: (96.956,88.018,0.613)
N9: (95.466,89.292,1.688)
O5': (94.274,90.570,-1.878)
O3': (94.687,93.591,0.374)
OP2: (92.973,88.697,-2.956)
C3': (94.763,92.176,0.495)
C1': (94.455,90.317,1.923)
C5': (93.154,91.268,-1.282)
O6: (98.600,86.004,2.280)
O4': (93.481,90.247,0.892)
C8: (96.057,88.957,0.493)
C2: (96.448,87.600,4.625)
C6: (97.724,86.775,2.696)
C5: (96.952,87.712,1.966)
C4: (96.030,88.483,2.641)
P: (94.104,89.643,-3.167)
C4': (93.424,91.517,0.187)
C2': (95.042,91.731,1.927)
O2': (94.404,92.511,2.920)
N1: (97.396,86.789,4.049)
N2: (96.272,87.462,5.945)
N3: (95.727,88.479,3.956)
N7: (96.956,88.018,0.613)
N9: (95.466,89.292,1.688)
O5': (94.274,90.570,-1.878)
O3': (94.687,93.591,0.374)
C2: (90.674,98.156,-1.146)
OP1: (96.325,93.752,-1.476)
OP2: (96.949,94.601,0.863)
C4: (89.971,95.939,-1.172)
O5': (95.297,95.827,-0.562)
C3': (94.586,98.436,0.475)
C1': (93.068,98.747,-1.294)
O4': (94.238,98.153,-1.826)
C5': (96.118,96.949,-0.916)
P: (95.936,94.413,-0.208)
O2: (90.437,99.375,-1.105)
C4': (95.304,98.217,-0.847)
C2': (93.424,99.330,0.072)
O2': (93.788,100.682,-0.093)
N1: (92.005,97.727,-1.228)
N3: (89.680,97.238,-1.118)
N4: (88.952,95.076,-1.183)
C6: (92.295,96.388,-1.253)
C5: (91.320,95.469,-1.229)
O3': (95.449,99.028,1.446)
OP1: (96.325,93.752,-1.476)
OP2: (96.949,94.601,0.863)
C4: (89.971,95.939,-1.172)
O5': (95.297,95.827,-0.562)
C3': (94.586,98.436,0.475)
C1': (93.068,98.747,-1.294)
O4': (94.238,98.153,-1.826)
C5': (96.118,96.949,-0.916)
P: (95.936,94.413,-0.208)
O2: (90.437,99.375,-1.105)
C4': (95.304,98.217,-0.847)
C2': (93.424,99.330,0.072)
O2': (93.788,100.682,-0.093)
N1: (92.005,97.727,-1.228)
N3: (89.680,97.238,-1.118)
N4: (88.952,95.076,-1.183)
C6: (92.295,96.388,-1.253)
C5: (91.320,95.469,-1.229)
O3': (95.449,99.028,1.446)
Image (generated by PyMOL):