Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJW:0363:0364
Extra
PDB:
ATOM 1 O3' U A 362 93.611 90.515 -4.385 1.00 70.45 O
ATOM 2 P G A 363 94.036 89.619 -3.118 1.00 71.55 P
ATOM 3 OP1 G A 363 95.403 89.102 -3.365 1.00 71.68 O
ATOM 4 OP2 G A 363 92.934 88.660 -2.828 1.00 71.15 O
ATOM 5 O5' G A 363 94.153 90.664 -1.918 1.00 71.99 O
ATOM 6 C5' G A 363 92.987 91.298 -1.345 1.00 71.09 C
ATOM 7 C4' G A 363 93.180 91.491 0.144 1.00 70.75 C
ATOM 8 O4' G A 363 93.177 90.201 0.814 1.00 72.67 O
ATOM 9 C3' G A 363 94.505 92.116 0.556 1.00 69.97 C
ATOM 10 O3' G A 363 94.476 93.528 0.454 1.00 66.18 O
ATOM 11 C2' G A 363 94.653 91.652 1.999 1.00 72.08 C
ATOM 12 O2' G A 363 93.918 92.438 2.919 1.00 72.42 O
ATOM 13 C1' G A 363 94.072 90.235 1.919 1.00 73.51 C
ATOM 14 N9 G A 363 95.109 89.227 1.713 1.00 75.19 N
ATOM 15 C8 G A 363 95.747 88.915 0.534 1.00 76.00 C
ATOM 16 N7 G A 363 96.672 88.005 0.676 1.00 76.93 N
ATOM 17 C5 G A 363 96.637 87.688 2.027 1.00 77.33 C
ATOM 18 C6 G A 363 97.420 86.773 2.773 1.00 78.36 C
ATOM 19 O6 G A 363 98.343 86.044 2.377 1.00 79.74 O
ATOM 20 N1 G A 363 97.045 86.756 4.115 1.00 77.95 N
ATOM 21 C2 G A 363 96.051 87.525 4.668 1.00 77.21 C
ATOM 22 N2 G A 363 95.836 87.361 5.981 1.00 77.69 N
ATOM 23 N3 G A 363 95.321 88.390 3.986 1.00 76.89 N
ATOM 24 C4 G A 363 95.666 88.420 2.679 1.00 76.50 C
ATOM 25 P C A 364 95.632 94.291 -0.349 1.00 63.12 P
ATOM 26 OP1 C A 364 95.763 93.611 -1.662 1.00 64.27 O
ATOM 27 OP2 C A 364 96.822 94.434 0.525 1.00 62.92 O
ATOM 28 O5' C A 364 94.999 95.726 -0.600 1.00 59.89 O
TER
ATOM 1 O3' G B 363 94.476 93.528 0.454 1.00 66.18 O
ATOM 2 P C B 364 95.632 94.291 -0.349 1.00 63.12 P
ATOM 3 OP1 C B 364 95.763 93.611 -1.662 1.00 64.27 O
ATOM 4 OP2 C B 364 96.822 94.434 0.525 1.00 62.92 O
ATOM 5 O5' C B 364 94.999 95.726 -0.600 1.00 59.89 O
ATOM 6 C5' C B 364 95.812 96.838 -0.987 1.00 55.48 C
ATOM 7 C4' C B 364 94.993 98.101 -0.954 1.00 53.28 C
ATOM 8 O4' C B 364 93.906 97.992 -1.908 1.00 52.31 O
ATOM 9 C3' C B 364 94.289 98.371 0.364 1.00 52.59 C
ATOM 10 O3' C B 364 95.155 98.986 1.306 1.00 52.47 O
ATOM 11 C2' C B 364 93.147 99.279 -0.061 1.00 51.61 C
ATOM 12 O2' C B 364 93.576 100.603 -0.294 1.00 52.16 O
ATOM 13 C1' C B 364 92.755 98.648 -1.397 1.00 51.00 C
ATOM 14 N1 C B 364 91.648 97.674 -1.303 1.00 49.87 N
ATOM 15 C2 C B 364 90.339 98.154 -1.133 1.00 48.88 C
ATOM 16 O2 C B 364 90.154 99.373 -1.018 1.00 48.83 O
ATOM 17 N3 C B 364 89.311 97.278 -1.100 1.00 47.83 N
ATOM 18 C4 C B 364 89.545 95.972 -1.225 1.00 47.82 C
ATOM 19 N4 C B 364 88.494 95.150 -1.228 1.00 46.49 N
ATOM 20 C5 C B 364 90.866 95.451 -1.364 1.00 48.08 C
ATOM 21 C6 C B 364 91.878 96.328 -1.396 1.00 48.99 C
ATOM 22 P C B 365 94.857 98.830 2.875 1.00 52.01 P
ATOM 23 OP1 C B 365 95.980 99.477 3.589 1.00 52.48 O
ATOM 24 OP2 C B 365 94.530 97.410 3.161 1.00 52.83 O
ATOM 25 O5' C B 365 93.552 99.711 3.096 1.00 49.61 O
TER
ATOM 2 P G A 363 94.036 89.619 -3.118 1.00 71.55 P
ATOM 3 OP1 G A 363 95.403 89.102 -3.365 1.00 71.68 O
ATOM 4 OP2 G A 363 92.934 88.660 -2.828 1.00 71.15 O
ATOM 5 O5' G A 363 94.153 90.664 -1.918 1.00 71.99 O
ATOM 6 C5' G A 363 92.987 91.298 -1.345 1.00 71.09 C
ATOM 7 C4' G A 363 93.180 91.491 0.144 1.00 70.75 C
ATOM 8 O4' G A 363 93.177 90.201 0.814 1.00 72.67 O
ATOM 9 C3' G A 363 94.505 92.116 0.556 1.00 69.97 C
ATOM 10 O3' G A 363 94.476 93.528 0.454 1.00 66.18 O
ATOM 11 C2' G A 363 94.653 91.652 1.999 1.00 72.08 C
ATOM 12 O2' G A 363 93.918 92.438 2.919 1.00 72.42 O
ATOM 13 C1' G A 363 94.072 90.235 1.919 1.00 73.51 C
ATOM 14 N9 G A 363 95.109 89.227 1.713 1.00 75.19 N
ATOM 15 C8 G A 363 95.747 88.915 0.534 1.00 76.00 C
ATOM 16 N7 G A 363 96.672 88.005 0.676 1.00 76.93 N
ATOM 17 C5 G A 363 96.637 87.688 2.027 1.00 77.33 C
ATOM 18 C6 G A 363 97.420 86.773 2.773 1.00 78.36 C
ATOM 19 O6 G A 363 98.343 86.044 2.377 1.00 79.74 O
ATOM 20 N1 G A 363 97.045 86.756 4.115 1.00 77.95 N
ATOM 21 C2 G A 363 96.051 87.525 4.668 1.00 77.21 C
ATOM 22 N2 G A 363 95.836 87.361 5.981 1.00 77.69 N
ATOM 23 N3 G A 363 95.321 88.390 3.986 1.00 76.89 N
ATOM 24 C4 G A 363 95.666 88.420 2.679 1.00 76.50 C
ATOM 25 P C A 364 95.632 94.291 -0.349 1.00 63.12 P
ATOM 26 OP1 C A 364 95.763 93.611 -1.662 1.00 64.27 O
ATOM 27 OP2 C A 364 96.822 94.434 0.525 1.00 62.92 O
ATOM 28 O5' C A 364 94.999 95.726 -0.600 1.00 59.89 O
TER
ATOM 1 O3' G B 363 94.476 93.528 0.454 1.00 66.18 O
ATOM 2 P C B 364 95.632 94.291 -0.349 1.00 63.12 P
ATOM 3 OP1 C B 364 95.763 93.611 -1.662 1.00 64.27 O
ATOM 4 OP2 C B 364 96.822 94.434 0.525 1.00 62.92 O
ATOM 5 O5' C B 364 94.999 95.726 -0.600 1.00 59.89 O
ATOM 6 C5' C B 364 95.812 96.838 -0.987 1.00 55.48 C
ATOM 7 C4' C B 364 94.993 98.101 -0.954 1.00 53.28 C
ATOM 8 O4' C B 364 93.906 97.992 -1.908 1.00 52.31 O
ATOM 9 C3' C B 364 94.289 98.371 0.364 1.00 52.59 C
ATOM 10 O3' C B 364 95.155 98.986 1.306 1.00 52.47 O
ATOM 11 C2' C B 364 93.147 99.279 -0.061 1.00 51.61 C
ATOM 12 O2' C B 364 93.576 100.603 -0.294 1.00 52.16 O
ATOM 13 C1' C B 364 92.755 98.648 -1.397 1.00 51.00 C
ATOM 14 N1 C B 364 91.648 97.674 -1.303 1.00 49.87 N
ATOM 15 C2 C B 364 90.339 98.154 -1.133 1.00 48.88 C
ATOM 16 O2 C B 364 90.154 99.373 -1.018 1.00 48.83 O
ATOM 17 N3 C B 364 89.311 97.278 -1.100 1.00 47.83 N
ATOM 18 C4 C B 364 89.545 95.972 -1.225 1.00 47.82 C
ATOM 19 N4 C B 364 88.494 95.150 -1.228 1.00 46.49 N
ATOM 20 C5 C B 364 90.866 95.451 -1.364 1.00 48.08 C
ATOM 21 C6 C B 364 91.878 96.328 -1.396 1.00 48.99 C
ATOM 22 P C B 365 94.857 98.830 2.875 1.00 52.01 P
ATOM 23 OP1 C B 365 95.980 99.477 3.589 1.00 52.48 O
ATOM 24 OP2 C B 365 94.530 97.410 3.161 1.00 52.83 O
ATOM 25 O5' C B 365 93.552 99.711 3.096 1.00 49.61 O
TER
Atoms:
OP1: (95.403,89.102,-3.365)
OP2: (92.934,88.660,-2.828)
C3': (94.505,92.116,0.556)
C1': (94.072,90.235,1.919)
C5': (92.987,91.298,-1.345)
O6: (98.343,86.044,2.377)
O4': (93.177,90.201,0.814)
C8: (95.747,88.915,0.534)
C2: (96.051,87.525,4.668)
C6: (97.420,86.773,2.773)
C5: (96.637,87.688,2.027)
C4: (95.666,88.420,2.679)
P: (94.036,89.619,-3.118)
C4': (93.180,91.491,0.144)
C2': (94.653,91.652,1.999)
O2': (93.918,92.438,2.919)
N1: (97.045,86.756,4.115)
N2: (95.836,87.361,5.981)
N3: (95.321,88.390,3.986)
N7: (96.672,88.005,0.676)
N9: (95.109,89.227,1.713)
O5': (94.153,90.664,-1.918)
O3': (94.476,93.528,0.454)
OP2: (92.934,88.660,-2.828)
C3': (94.505,92.116,0.556)
C1': (94.072,90.235,1.919)
C5': (92.987,91.298,-1.345)
O6: (98.343,86.044,2.377)
O4': (93.177,90.201,0.814)
C8: (95.747,88.915,0.534)
C2: (96.051,87.525,4.668)
C6: (97.420,86.773,2.773)
C5: (96.637,87.688,2.027)
C4: (95.666,88.420,2.679)
P: (94.036,89.619,-3.118)
C4': (93.180,91.491,0.144)
C2': (94.653,91.652,1.999)
O2': (93.918,92.438,2.919)
N1: (97.045,86.756,4.115)
N2: (95.836,87.361,5.981)
N3: (95.321,88.390,3.986)
N7: (96.672,88.005,0.676)
N9: (95.109,89.227,1.713)
O5': (94.153,90.664,-1.918)
O3': (94.476,93.528,0.454)
C2: (90.339,98.154,-1.133)
OP1: (95.763,93.611,-1.662)
OP2: (96.822,94.434,0.525)
C4: (89.545,95.972,-1.225)
O5': (94.999,95.726,-0.600)
C3': (94.289,98.371,0.364)
C1': (92.755,98.648,-1.397)
O4': (93.906,97.992,-1.908)
C5': (95.812,96.838,-0.987)
P: (95.632,94.291,-0.349)
O2: (90.154,99.373,-1.018)
C4': (94.993,98.101,-0.954)
C2': (93.147,99.279,-0.061)
O2': (93.576,100.603,-0.294)
N1: (91.648,97.674,-1.303)
N3: (89.311,97.278,-1.100)
N4: (88.494,95.150,-1.228)
C6: (91.878,96.328,-1.396)
C5: (90.866,95.451,-1.364)
O3': (95.155,98.986,1.306)
OP1: (95.763,93.611,-1.662)
OP2: (96.822,94.434,0.525)
C4: (89.545,95.972,-1.225)
O5': (94.999,95.726,-0.600)
C3': (94.289,98.371,0.364)
C1': (92.755,98.648,-1.397)
O4': (93.906,97.992,-1.908)
C5': (95.812,96.838,-0.987)
P: (95.632,94.291,-0.349)
O2: (90.154,99.373,-1.018)
C4': (94.993,98.101,-0.954)
C2': (93.147,99.279,-0.061)
O2': (93.576,100.603,-0.294)
N1: (91.648,97.674,-1.303)
N3: (89.311,97.278,-1.100)
N4: (88.494,95.150,-1.228)
C6: (91.878,96.328,-1.396)
C5: (90.866,95.451,-1.364)
O3': (95.155,98.986,1.306)
Image (generated by PyMOL):