Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1M5O:E54:E57
Extra
PDB:
ATOM 1 O3' G A 53 12.430 8.475 108.729 1.00 54.94 O
ATOM 2 P G A 54 11.532 8.210 110.039 1.00 51.55 P
ATOM 3 OP1 G A 54 11.628 6.753 110.329 1.00 61.45 O
ATOM 4 OP2 G A 54 10.198 8.830 109.842 1.00 60.00 O
ATOM 5 O5' G A 54 12.336 8.991 111.171 1.00 44.79 O
ATOM 6 C5' G A 54 13.761 9.004 111.135 1.00 49.57 C
ATOM 7 C4' G A 54 14.321 9.896 112.210 1.00 54.02 C
ATOM 8 O4' G A 54 13.967 11.278 111.948 1.00 45.63 O
ATOM 9 C3' G A 54 13.739 9.572 113.562 1.00 57.60 C
ATOM 10 O3' G A 54 14.657 8.995 114.500 1.00 73.72 O
ATOM 11 C2' G A 54 12.606 10.577 113.804 1.00 55.74 C
ATOM 12 O2' G A 54 12.471 11.051 115.123 1.00 57.58 O
ATOM 13 C1' G A 54 13.012 11.737 112.883 1.00 53.88 C
ATOM 14 N9 G A 54 11.967 12.442 112.142 1.00 50.47 N
ATOM 15 C8 G A 54 10.856 11.911 111.532 1.00 47.17 C
ATOM 16 N7 G A 54 10.140 12.808 110.901 1.00 46.57 N
ATOM 17 C5 G A 54 10.812 14.005 111.119 1.00 49.13 C
ATOM 18 C6 G A 54 10.513 15.339 110.679 1.00 51.90 C
ATOM 19 O6 G A 54 9.566 15.735 109.979 1.00 51.30 O
ATOM 20 N1 G A 54 11.460 16.251 111.136 1.00 49.62 N
ATOM 21 C2 G A 54 12.552 15.936 111.908 1.00 50.46 C
ATOM 22 N2 G A 54 13.351 16.958 112.244 1.00 44.91 N
ATOM 23 N3 G A 54 12.841 14.708 112.321 1.00 51.01 N
ATOM 24 C4 G A 54 11.935 13.800 111.892 1.00 49.55 C
ATOM 25 P U A 55 15.067 9.784 115.833 1.00 62.75 P
ATOM 26 OP1 U A 55 14.772 11.223 115.633 1.00 90.09 O
ATOM 27 OP2 U A 55 16.434 9.369 116.220 1.00 65.97 O
ATOM 28 O5' U A 55 14.072 9.183 116.914 1.00 63.94 O
TER
ATOM 1 O3' A B 56 7.898 11.483 115.249 1.00 51.45 O
ATOM 2 P U B 57 8.413 9.971 115.328 1.00 58.41 P
ATOM 3 OP1 U B 57 9.885 9.981 115.510 1.00 77.00 O
ATOM 4 OP2 U B 57 7.824 9.303 114.140 1.00 69.37 O
ATOM 5 O5' U B 57 7.731 9.379 116.647 1.00 59.01 O
ATOM 6 C5' U B 57 6.434 8.778 116.605 1.00 50.33 C
ATOM 7 C4' U B 57 6.226 7.861 117.798 1.00 64.59 C
ATOM 8 O4' U B 57 7.159 6.754 117.725 1.00 66.95 O
ATOM 9 C3' U B 57 6.526 8.582 119.109 1.00 61.41 C
ATOM 10 O3' U B 57 5.578 8.325 120.145 1.00 76.84 O
ATOM 11 C2' U B 57 7.954 8.190 119.480 1.00 61.26 C
ATOM 12 O2' U B 57 8.088 7.960 120.863 1.00 65.00 O
ATOM 13 C1' U B 57 8.096 6.843 118.773 1.00 62.29 C
ATOM 14 N1 U B 57 9.421 6.423 118.299 1.00 69.91 N
ATOM 15 C2 U B 57 10.233 5.758 119.208 1.00 72.63 C
ATOM 16 O2 U B 57 9.897 5.539 120.363 1.00 73.86 O
ATOM 17 N3 U B 57 11.446 5.355 118.715 1.00 71.39 N
ATOM 18 C4 U B 57 11.923 5.541 117.438 1.00 74.64 C
ATOM 19 O4 U B 57 13.038 5.111 117.145 1.00 75.73 O
ATOM 20 C5 U B 57 11.032 6.244 116.559 1.00 73.63 C
ATOM 21 C6 U B 57 9.840 6.654 117.012 1.00 71.77 C
ATOM 22 P A B 58 4.133 9.024 120.129 1.00 65.79 P
ATOM 23 OP1 A B 58 3.327 8.361 121.182 1.00 75.90 O
ATOM 24 OP2 A B 58 3.633 9.044 118.730 1.00 72.36 O
ATOM 25 O5' A B 58 4.422 10.520 120.589 1.00 69.55 O
TER
ATOM 2 P G A 54 11.532 8.210 110.039 1.00 51.55 P
ATOM 3 OP1 G A 54 11.628 6.753 110.329 1.00 61.45 O
ATOM 4 OP2 G A 54 10.198 8.830 109.842 1.00 60.00 O
ATOM 5 O5' G A 54 12.336 8.991 111.171 1.00 44.79 O
ATOM 6 C5' G A 54 13.761 9.004 111.135 1.00 49.57 C
ATOM 7 C4' G A 54 14.321 9.896 112.210 1.00 54.02 C
ATOM 8 O4' G A 54 13.967 11.278 111.948 1.00 45.63 O
ATOM 9 C3' G A 54 13.739 9.572 113.562 1.00 57.60 C
ATOM 10 O3' G A 54 14.657 8.995 114.500 1.00 73.72 O
ATOM 11 C2' G A 54 12.606 10.577 113.804 1.00 55.74 C
ATOM 12 O2' G A 54 12.471 11.051 115.123 1.00 57.58 O
ATOM 13 C1' G A 54 13.012 11.737 112.883 1.00 53.88 C
ATOM 14 N9 G A 54 11.967 12.442 112.142 1.00 50.47 N
ATOM 15 C8 G A 54 10.856 11.911 111.532 1.00 47.17 C
ATOM 16 N7 G A 54 10.140 12.808 110.901 1.00 46.57 N
ATOM 17 C5 G A 54 10.812 14.005 111.119 1.00 49.13 C
ATOM 18 C6 G A 54 10.513 15.339 110.679 1.00 51.90 C
ATOM 19 O6 G A 54 9.566 15.735 109.979 1.00 51.30 O
ATOM 20 N1 G A 54 11.460 16.251 111.136 1.00 49.62 N
ATOM 21 C2 G A 54 12.552 15.936 111.908 1.00 50.46 C
ATOM 22 N2 G A 54 13.351 16.958 112.244 1.00 44.91 N
ATOM 23 N3 G A 54 12.841 14.708 112.321 1.00 51.01 N
ATOM 24 C4 G A 54 11.935 13.800 111.892 1.00 49.55 C
ATOM 25 P U A 55 15.067 9.784 115.833 1.00 62.75 P
ATOM 26 OP1 U A 55 14.772 11.223 115.633 1.00 90.09 O
ATOM 27 OP2 U A 55 16.434 9.369 116.220 1.00 65.97 O
ATOM 28 O5' U A 55 14.072 9.183 116.914 1.00 63.94 O
TER
ATOM 1 O3' A B 56 7.898 11.483 115.249 1.00 51.45 O
ATOM 2 P U B 57 8.413 9.971 115.328 1.00 58.41 P
ATOM 3 OP1 U B 57 9.885 9.981 115.510 1.00 77.00 O
ATOM 4 OP2 U B 57 7.824 9.303 114.140 1.00 69.37 O
ATOM 5 O5' U B 57 7.731 9.379 116.647 1.00 59.01 O
ATOM 6 C5' U B 57 6.434 8.778 116.605 1.00 50.33 C
ATOM 7 C4' U B 57 6.226 7.861 117.798 1.00 64.59 C
ATOM 8 O4' U B 57 7.159 6.754 117.725 1.00 66.95 O
ATOM 9 C3' U B 57 6.526 8.582 119.109 1.00 61.41 C
ATOM 10 O3' U B 57 5.578 8.325 120.145 1.00 76.84 O
ATOM 11 C2' U B 57 7.954 8.190 119.480 1.00 61.26 C
ATOM 12 O2' U B 57 8.088 7.960 120.863 1.00 65.00 O
ATOM 13 C1' U B 57 8.096 6.843 118.773 1.00 62.29 C
ATOM 14 N1 U B 57 9.421 6.423 118.299 1.00 69.91 N
ATOM 15 C2 U B 57 10.233 5.758 119.208 1.00 72.63 C
ATOM 16 O2 U B 57 9.897 5.539 120.363 1.00 73.86 O
ATOM 17 N3 U B 57 11.446 5.355 118.715 1.00 71.39 N
ATOM 18 C4 U B 57 11.923 5.541 117.438 1.00 74.64 C
ATOM 19 O4 U B 57 13.038 5.111 117.145 1.00 75.73 O
ATOM 20 C5 U B 57 11.032 6.244 116.559 1.00 73.63 C
ATOM 21 C6 U B 57 9.840 6.654 117.012 1.00 71.77 C
ATOM 22 P A B 58 4.133 9.024 120.129 1.00 65.79 P
ATOM 23 OP1 A B 58 3.327 8.361 121.182 1.00 75.90 O
ATOM 24 OP2 A B 58 3.633 9.044 118.730 1.00 72.36 O
ATOM 25 O5' A B 58 4.422 10.520 120.589 1.00 69.55 O
TER
Atoms:
OP1: (11.628,6.753,110.329)
OP2: (10.198,8.830,109.842)
C3': (13.739,9.572,113.562)
C1': (13.012,11.737,112.883)
C5': (13.761,9.004,111.135)
O6: (9.566,15.735,109.979)
O4': (13.967,11.278,111.948)
C8: (10.856,11.911,111.532)
C2: (12.552,15.936,111.908)
C6: (10.513,15.339,110.679)
C5: (10.812,14.005,111.119)
C4: (11.935,13.800,111.892)
P: (11.532,8.210,110.039)
C4': (14.321,9.896,112.210)
C2': (12.606,10.577,113.804)
O2': (12.471,11.051,115.123)
N1: (11.460,16.251,111.136)
N2: (13.351,16.958,112.244)
N3: (12.841,14.708,112.321)
N7: (10.140,12.808,110.901)
N9: (11.967,12.442,112.142)
O5': (12.336,8.991,111.171)
O3': (14.657,8.995,114.500)
OP2: (10.198,8.830,109.842)
C3': (13.739,9.572,113.562)
C1': (13.012,11.737,112.883)
C5': (13.761,9.004,111.135)
O6: (9.566,15.735,109.979)
O4': (13.967,11.278,111.948)
C8: (10.856,11.911,111.532)
C2: (12.552,15.936,111.908)
C6: (10.513,15.339,110.679)
C5: (10.812,14.005,111.119)
C4: (11.935,13.800,111.892)
P: (11.532,8.210,110.039)
C4': (14.321,9.896,112.210)
C2': (12.606,10.577,113.804)
O2': (12.471,11.051,115.123)
N1: (11.460,16.251,111.136)
N2: (13.351,16.958,112.244)
N3: (12.841,14.708,112.321)
N7: (10.140,12.808,110.901)
N9: (11.967,12.442,112.142)
O5': (12.336,8.991,111.171)
O3': (14.657,8.995,114.500)
C4: (11.923,5.541,117.438)
N3: (11.446,5.355,118.715)
OP1: (9.885,9.981,115.510)
OP2: (7.824,9.303,114.140)
C2: (10.233,5.758,119.208)
C1': (8.096,6.843,118.773)
C3': (6.526,8.582,119.109)
O5': (7.731,9.379,116.647)
O4': (7.159,6.754,117.725)
C5': (6.434,8.778,116.605)
P: (8.413,9.971,115.328)
C4': (6.226,7.861,117.798)
C2': (7.954,8.190,119.480)
O2': (8.088,7.960,120.863)
N1: (9.421,6.423,118.299)
O4: (13.038,5.111,117.145)
O2: (9.897,5.539,120.363)
C6: (9.840,6.654,117.012)
C5: (11.032,6.244,116.559)
O3': (5.578,8.325,120.145)
N3: (11.446,5.355,118.715)
OP1: (9.885,9.981,115.510)
OP2: (7.824,9.303,114.140)
C2: (10.233,5.758,119.208)
C1': (8.096,6.843,118.773)
C3': (6.526,8.582,119.109)
O5': (7.731,9.379,116.647)
O4': (7.159,6.754,117.725)
C5': (6.434,8.778,116.605)
P: (8.413,9.971,115.328)
C4': (6.226,7.861,117.798)
C2': (7.954,8.190,119.480)
O2': (8.088,7.960,120.863)
N1: (9.421,6.423,118.299)
O4: (13.038,5.111,117.145)
O2: (9.897,5.539,120.363)
C6: (9.840,6.654,117.012)
C5: (11.032,6.244,116.559)
O3': (5.578,8.325,120.145)
Image (generated by PyMOL):