Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1M5P:E54:E57
Extra
PDB:
ATOM 1 O3' G A 53 11.209 8.410 107.932 1.00 68.45 O
ATOM 2 P G A 54 10.409 8.122 109.299 1.00 70.45 P
ATOM 3 OP1 G A 54 10.674 6.707 109.684 1.00 70.08 O
ATOM 4 OP2 G A 54 9.007 8.588 109.146 1.00 71.79 O
ATOM 5 O5' G A 54 11.163 9.046 110.352 1.00 58.13 O
ATOM 6 C5' G A 54 12.587 9.095 110.370 1.00 48.93 C
ATOM 7 C4' G A 54 13.052 9.930 111.525 1.00 59.70 C
ATOM 8 O4' G A 54 12.645 11.307 111.322 1.00 54.06 O
ATOM 9 C3' G A 54 12.383 9.491 112.802 1.00 62.24 C
ATOM 10 O3' G A 54 13.189 8.773 113.744 1.00 76.18 O
ATOM 11 C2' G A 54 11.183 10.423 113.017 1.00 68.98 C
ATOM 12 O2' G A 54 10.866 10.807 114.337 1.00 56.89 O
ATOM 13 C1' G A 54 11.603 11.658 112.214 1.00 68.54 C
ATOM 14 N9 G A 54 10.570 12.335 111.437 1.00 62.88 N
ATOM 15 C8 G A 54 9.529 11.768 110.743 1.00 60.79 C
ATOM 16 N7 G A 54 8.819 12.641 110.081 1.00 56.94 N
ATOM 17 C5 G A 54 9.418 13.860 110.370 1.00 65.49 C
ATOM 18 C6 G A 54 9.092 15.178 109.937 1.00 65.71 C
ATOM 19 O6 G A 54 8.187 15.536 109.178 1.00 70.49 O
ATOM 20 N1 G A 54 9.954 16.124 110.481 1.00 64.11 N
ATOM 21 C2 G A 54 11.000 15.845 111.326 1.00 64.85 C
ATOM 22 N2 G A 54 11.714 16.896 111.739 1.00 63.05 N
ATOM 23 N3 G A 54 11.320 14.625 111.733 1.00 62.79 N
ATOM 24 C4 G A 54 10.491 13.688 111.220 1.00 65.00 C
ATOM 25 P U A 55 13.678 9.474 115.099 1.00 67.91 P
ATOM 26 OP1 U A 55 13.465 10.934 114.952 1.00 93.13 O
ATOM 27 OP2 U A 55 15.030 8.966 115.420 1.00 81.88 O
ATOM 28 O5' U A 55 12.672 8.876 116.177 1.00 63.63 O
TER
ATOM 1 O3' A B 56 7.855 10.915 114.741 1.00 70.96 O
ATOM 2 P U B 57 6.802 9.852 114.186 1.00 68.94 P
ATOM 3 OP1 U B 57 7.551 8.848 113.390 1.00 86.62 O
ATOM 4 OP2 U B 57 5.720 10.642 113.545 1.00 78.41 O
ATOM 5 O5' U B 57 6.235 9.135 115.500 1.00 79.32 O
ATOM 6 C5' U B 57 4.976 8.445 115.471 1.00 84.06 C
ATOM 7 C4' U B 57 4.813 7.521 116.671 1.00 75.08 C
ATOM 8 O4' U B 57 5.803 6.465 116.629 1.00 84.17 O
ATOM 9 C3' U B 57 5.034 8.249 117.992 1.00 61.41 C
ATOM 10 O3' U B 57 4.088 7.862 118.979 1.00 69.67 O
ATOM 11 C2' U B 57 6.473 7.948 118.394 1.00 73.23 C
ATOM 12 O2' U B 57 6.585 7.727 119.778 1.00 81.49 O
ATOM 13 C1' U B 57 6.697 6.608 117.701 1.00 75.42 C
ATOM 14 N1 U B 57 8.038 6.168 117.305 1.00 88.47 N
ATOM 15 C2 U B 57 8.793 5.545 118.277 1.00 94.46 C
ATOM 16 O2 U B 57 8.402 5.397 119.423 1.00 98.48 O
ATOM 17 N3 U B 57 10.019 5.094 117.862 1.00 96.08 N
ATOM 18 C4 U B 57 10.557 5.205 116.601 1.00 93.79 C
ATOM 19 O4 U B 57 11.674 4.736 116.380 1.00 91.05 O
ATOM 20 C5 U B 57 9.719 5.878 115.652 1.00 93.30 C
ATOM 21 C6 U B 57 8.518 6.330 116.031 1.00 91.26 C
ATOM 22 P A B 58 2.710 8.664 119.141 1.00 78.05 P
ATOM 23 OP1 A B 58 2.034 8.181 120.372 1.00 63.67 O
ATOM 24 OP2 A B 58 1.984 8.624 117.843 1.00 69.41 O
ATOM 25 O5' A B 58 3.193 10.150 119.414 1.00 72.26 O
TER
ATOM 2 P G A 54 10.409 8.122 109.299 1.00 70.45 P
ATOM 3 OP1 G A 54 10.674 6.707 109.684 1.00 70.08 O
ATOM 4 OP2 G A 54 9.007 8.588 109.146 1.00 71.79 O
ATOM 5 O5' G A 54 11.163 9.046 110.352 1.00 58.13 O
ATOM 6 C5' G A 54 12.587 9.095 110.370 1.00 48.93 C
ATOM 7 C4' G A 54 13.052 9.930 111.525 1.00 59.70 C
ATOM 8 O4' G A 54 12.645 11.307 111.322 1.00 54.06 O
ATOM 9 C3' G A 54 12.383 9.491 112.802 1.00 62.24 C
ATOM 10 O3' G A 54 13.189 8.773 113.744 1.00 76.18 O
ATOM 11 C2' G A 54 11.183 10.423 113.017 1.00 68.98 C
ATOM 12 O2' G A 54 10.866 10.807 114.337 1.00 56.89 O
ATOM 13 C1' G A 54 11.603 11.658 112.214 1.00 68.54 C
ATOM 14 N9 G A 54 10.570 12.335 111.437 1.00 62.88 N
ATOM 15 C8 G A 54 9.529 11.768 110.743 1.00 60.79 C
ATOM 16 N7 G A 54 8.819 12.641 110.081 1.00 56.94 N
ATOM 17 C5 G A 54 9.418 13.860 110.370 1.00 65.49 C
ATOM 18 C6 G A 54 9.092 15.178 109.937 1.00 65.71 C
ATOM 19 O6 G A 54 8.187 15.536 109.178 1.00 70.49 O
ATOM 20 N1 G A 54 9.954 16.124 110.481 1.00 64.11 N
ATOM 21 C2 G A 54 11.000 15.845 111.326 1.00 64.85 C
ATOM 22 N2 G A 54 11.714 16.896 111.739 1.00 63.05 N
ATOM 23 N3 G A 54 11.320 14.625 111.733 1.00 62.79 N
ATOM 24 C4 G A 54 10.491 13.688 111.220 1.00 65.00 C
ATOM 25 P U A 55 13.678 9.474 115.099 1.00 67.91 P
ATOM 26 OP1 U A 55 13.465 10.934 114.952 1.00 93.13 O
ATOM 27 OP2 U A 55 15.030 8.966 115.420 1.00 81.88 O
ATOM 28 O5' U A 55 12.672 8.876 116.177 1.00 63.63 O
TER
ATOM 1 O3' A B 56 7.855 10.915 114.741 1.00 70.96 O
ATOM 2 P U B 57 6.802 9.852 114.186 1.00 68.94 P
ATOM 3 OP1 U B 57 7.551 8.848 113.390 1.00 86.62 O
ATOM 4 OP2 U B 57 5.720 10.642 113.545 1.00 78.41 O
ATOM 5 O5' U B 57 6.235 9.135 115.500 1.00 79.32 O
ATOM 6 C5' U B 57 4.976 8.445 115.471 1.00 84.06 C
ATOM 7 C4' U B 57 4.813 7.521 116.671 1.00 75.08 C
ATOM 8 O4' U B 57 5.803 6.465 116.629 1.00 84.17 O
ATOM 9 C3' U B 57 5.034 8.249 117.992 1.00 61.41 C
ATOM 10 O3' U B 57 4.088 7.862 118.979 1.00 69.67 O
ATOM 11 C2' U B 57 6.473 7.948 118.394 1.00 73.23 C
ATOM 12 O2' U B 57 6.585 7.727 119.778 1.00 81.49 O
ATOM 13 C1' U B 57 6.697 6.608 117.701 1.00 75.42 C
ATOM 14 N1 U B 57 8.038 6.168 117.305 1.00 88.47 N
ATOM 15 C2 U B 57 8.793 5.545 118.277 1.00 94.46 C
ATOM 16 O2 U B 57 8.402 5.397 119.423 1.00 98.48 O
ATOM 17 N3 U B 57 10.019 5.094 117.862 1.00 96.08 N
ATOM 18 C4 U B 57 10.557 5.205 116.601 1.00 93.79 C
ATOM 19 O4 U B 57 11.674 4.736 116.380 1.00 91.05 O
ATOM 20 C5 U B 57 9.719 5.878 115.652 1.00 93.30 C
ATOM 21 C6 U B 57 8.518 6.330 116.031 1.00 91.26 C
ATOM 22 P A B 58 2.710 8.664 119.141 1.00 78.05 P
ATOM 23 OP1 A B 58 2.034 8.181 120.372 1.00 63.67 O
ATOM 24 OP2 A B 58 1.984 8.624 117.843 1.00 69.41 O
ATOM 25 O5' A B 58 3.193 10.150 119.414 1.00 72.26 O
TER
Atoms:
OP1: (10.674,6.707,109.684)
OP2: (9.007,8.588,109.146)
C3': (12.383,9.491,112.802)
C1': (11.603,11.658,112.214)
C5': (12.587,9.095,110.370)
O6: (8.187,15.536,109.178)
O4': (12.645,11.307,111.322)
C8: (9.529,11.768,110.743)
C2: (11.000,15.845,111.326)
C6: (9.092,15.178,109.937)
C5: (9.418,13.860,110.370)
C4: (10.491,13.688,111.220)
P: (10.409,8.122,109.299)
C4': (13.052,9.930,111.525)
C2': (11.183,10.423,113.017)
O2': (10.866,10.807,114.337)
N1: (9.954,16.124,110.481)
N2: (11.714,16.896,111.739)
N3: (11.320,14.625,111.733)
N7: (8.819,12.641,110.081)
N9: (10.570,12.335,111.437)
O5': (11.163,9.046,110.352)
O3': (13.189,8.773,113.744)
OP2: (9.007,8.588,109.146)
C3': (12.383,9.491,112.802)
C1': (11.603,11.658,112.214)
C5': (12.587,9.095,110.370)
O6: (8.187,15.536,109.178)
O4': (12.645,11.307,111.322)
C8: (9.529,11.768,110.743)
C2: (11.000,15.845,111.326)
C6: (9.092,15.178,109.937)
C5: (9.418,13.860,110.370)
C4: (10.491,13.688,111.220)
P: (10.409,8.122,109.299)
C4': (13.052,9.930,111.525)
C2': (11.183,10.423,113.017)
O2': (10.866,10.807,114.337)
N1: (9.954,16.124,110.481)
N2: (11.714,16.896,111.739)
N3: (11.320,14.625,111.733)
N7: (8.819,12.641,110.081)
N9: (10.570,12.335,111.437)
O5': (11.163,9.046,110.352)
O3': (13.189,8.773,113.744)
C4: (10.557,5.205,116.601)
N3: (10.019,5.094,117.862)
OP1: (7.551,8.848,113.390)
OP2: (5.720,10.642,113.545)
C2: (8.793,5.545,118.277)
C1': (6.697,6.608,117.701)
C3': (5.034,8.249,117.992)
O5': (6.235,9.135,115.500)
O4': (5.803,6.465,116.629)
C5': (4.976,8.445,115.471)
P: (6.802,9.852,114.186)
C4': (4.813,7.521,116.671)
C2': (6.473,7.948,118.394)
O2': (6.585,7.727,119.778)
N1: (8.038,6.168,117.305)
O4: (11.674,4.736,116.380)
O2: (8.402,5.397,119.423)
C6: (8.518,6.330,116.031)
C5: (9.719,5.878,115.652)
O3': (4.088,7.862,118.979)
N3: (10.019,5.094,117.862)
OP1: (7.551,8.848,113.390)
OP2: (5.720,10.642,113.545)
C2: (8.793,5.545,118.277)
C1': (6.697,6.608,117.701)
C3': (5.034,8.249,117.992)
O5': (6.235,9.135,115.500)
O4': (5.803,6.465,116.629)
C5': (4.976,8.445,115.471)
P: (6.802,9.852,114.186)
C4': (4.813,7.521,116.671)
C2': (6.473,7.948,118.394)
O2': (6.585,7.727,119.778)
N1: (8.038,6.168,117.305)
O4: (11.674,4.736,116.380)
O2: (8.402,5.397,119.423)
C6: (8.518,6.330,116.031)
C5: (9.719,5.878,115.652)
O3': (4.088,7.862,118.979)
Image (generated by PyMOL):