Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1M5V:E54:E57
Extra
PDB:
ATOM 1 O3' G A 53 9.802 8.090 107.150 1.00 42.09 O
ATOM 2 P G A 54 8.893 7.777 108.441 1.00 41.55 P
ATOM 3 OP1 G A 54 9.114 6.348 108.778 1.00 51.33 O
ATOM 4 OP2 G A 54 7.512 8.259 108.172 1.00 48.36 O
ATOM 5 O5' G A 54 9.534 8.663 109.604 1.00 36.54 O
ATOM 6 C5' G A 54 10.898 8.485 110.000 1.00 32.27 C
ATOM 7 C4' G A 54 11.334 9.599 110.932 1.00 47.51 C
ATOM 8 O4' G A 54 10.915 10.870 110.370 1.00 36.56 O
ATOM 9 C3' G A 54 10.673 9.509 112.309 1.00 41.32 C
ATOM 10 O3' G A 54 11.605 9.839 113.340 1.00 52.51 O
ATOM 11 C2' G A 54 9.472 10.454 112.255 1.00 47.39 C
ATOM 12 O2' G A 54 9.334 11.199 113.445 1.00 68.80 O
ATOM 13 C1' G A 54 9.912 11.442 111.175 1.00 45.90 C
ATOM 14 N9 G A 54 8.917 12.092 110.335 1.00 43.13 N
ATOM 15 C8 G A 54 7.874 11.529 109.645 1.00 43.14 C
ATOM 16 N7 G A 54 7.190 12.405 108.954 1.00 39.57 N
ATOM 17 C5 G A 54 7.816 13.615 109.214 1.00 41.27 C
ATOM 18 C6 G A 54 7.526 14.926 108.747 1.00 42.60 C
ATOM 19 O6 G A 54 6.629 15.289 107.979 1.00 40.63 O
ATOM 20 N1 G A 54 8.413 15.863 109.267 1.00 43.31 N
ATOM 21 C2 G A 54 9.451 15.581 110.123 1.00 46.08 C
ATOM 22 N2 G A 54 10.207 16.625 110.513 1.00 34.99 N
ATOM 23 N3 G A 54 9.730 14.363 110.565 1.00 43.86 N
ATOM 24 C4 G A 54 8.878 13.438 110.072 1.00 45.01 C
ATOM 25 P U A 55 12.001 8.769 114.465 1.00 56.54 P
ATOM 26 OP1 U A 55 13.318 9.202 114.994 1.00 53.95 O
ATOM 27 OP2 U A 55 11.860 7.430 113.846 1.00 67.86 O
ATOM 28 O5' U A 55 10.912 8.943 115.625 1.00 53.48 O
TER
ATOM 1 O3' A B 56 6.262 10.614 113.950 1.00 67.53 O
ATOM 2 P U B 57 5.280 9.507 113.331 1.00 57.54 P
ATOM 3 OP1 U B 57 6.109 8.540 112.574 1.00 70.26 O
ATOM 4 OP2 U B 57 4.187 10.231 112.643 1.00 76.26 O
ATOM 5 O5' U B 57 4.669 8.759 114.609 1.00 69.30 O
ATOM 6 C5' U B 57 3.356 8.182 114.563 1.00 59.34 C
ATOM 7 C4' U B 57 3.106 7.272 115.758 1.00 63.35 C
ATOM 8 O4' U B 57 4.036 6.157 115.731 1.00 67.06 O
ATOM 9 C3' U B 57 3.345 7.987 117.086 1.00 59.14 C
ATOM 10 O3' U B 57 2.365 7.692 118.083 1.00 64.66 O
ATOM 11 C2' U B 57 4.752 7.591 117.523 1.00 61.17 C
ATOM 12 O2' U B 57 4.773 7.343 118.907 1.00 50.25 O
ATOM 13 C1' U B 57 4.928 6.247 116.817 1.00 62.22 C
ATOM 14 N1 U B 57 6.266 5.802 116.405 1.00 65.10 N
ATOM 15 C2 U B 57 7.029 5.133 117.356 1.00 68.46 C
ATOM 16 O2 U B 57 6.645 4.941 118.501 1.00 66.69 O
ATOM 17 N3 U B 57 8.253 4.692 116.917 1.00 66.32 N
ATOM 18 C4 U B 57 8.786 4.851 115.656 1.00 66.96 C
ATOM 19 O4 U B 57 9.906 4.394 115.413 1.00 62.95 O
ATOM 20 C5 U B 57 7.944 5.565 114.735 1.00 67.83 C
ATOM 21 C6 U B 57 6.743 6.008 115.135 1.00 65.88 C
ATOM 22 P A B 58 0.962 8.468 118.112 1.00 56.72 P
ATOM 23 OP1 A B 58 0.227 7.947 119.287 1.00 61.06 O
ATOM 24 OP2 A B 58 0.342 8.384 116.761 1.00 61.15 O
ATOM 25 O5' A B 58 1.357 9.980 118.405 1.00 57.13 O
TER
ATOM 2 P G A 54 8.893 7.777 108.441 1.00 41.55 P
ATOM 3 OP1 G A 54 9.114 6.348 108.778 1.00 51.33 O
ATOM 4 OP2 G A 54 7.512 8.259 108.172 1.00 48.36 O
ATOM 5 O5' G A 54 9.534 8.663 109.604 1.00 36.54 O
ATOM 6 C5' G A 54 10.898 8.485 110.000 1.00 32.27 C
ATOM 7 C4' G A 54 11.334 9.599 110.932 1.00 47.51 C
ATOM 8 O4' G A 54 10.915 10.870 110.370 1.00 36.56 O
ATOM 9 C3' G A 54 10.673 9.509 112.309 1.00 41.32 C
ATOM 10 O3' G A 54 11.605 9.839 113.340 1.00 52.51 O
ATOM 11 C2' G A 54 9.472 10.454 112.255 1.00 47.39 C
ATOM 12 O2' G A 54 9.334 11.199 113.445 1.00 68.80 O
ATOM 13 C1' G A 54 9.912 11.442 111.175 1.00 45.90 C
ATOM 14 N9 G A 54 8.917 12.092 110.335 1.00 43.13 N
ATOM 15 C8 G A 54 7.874 11.529 109.645 1.00 43.14 C
ATOM 16 N7 G A 54 7.190 12.405 108.954 1.00 39.57 N
ATOM 17 C5 G A 54 7.816 13.615 109.214 1.00 41.27 C
ATOM 18 C6 G A 54 7.526 14.926 108.747 1.00 42.60 C
ATOM 19 O6 G A 54 6.629 15.289 107.979 1.00 40.63 O
ATOM 20 N1 G A 54 8.413 15.863 109.267 1.00 43.31 N
ATOM 21 C2 G A 54 9.451 15.581 110.123 1.00 46.08 C
ATOM 22 N2 G A 54 10.207 16.625 110.513 1.00 34.99 N
ATOM 23 N3 G A 54 9.730 14.363 110.565 1.00 43.86 N
ATOM 24 C4 G A 54 8.878 13.438 110.072 1.00 45.01 C
ATOM 25 P U A 55 12.001 8.769 114.465 1.00 56.54 P
ATOM 26 OP1 U A 55 13.318 9.202 114.994 1.00 53.95 O
ATOM 27 OP2 U A 55 11.860 7.430 113.846 1.00 67.86 O
ATOM 28 O5' U A 55 10.912 8.943 115.625 1.00 53.48 O
TER
ATOM 1 O3' A B 56 6.262 10.614 113.950 1.00 67.53 O
ATOM 2 P U B 57 5.280 9.507 113.331 1.00 57.54 P
ATOM 3 OP1 U B 57 6.109 8.540 112.574 1.00 70.26 O
ATOM 4 OP2 U B 57 4.187 10.231 112.643 1.00 76.26 O
ATOM 5 O5' U B 57 4.669 8.759 114.609 1.00 69.30 O
ATOM 6 C5' U B 57 3.356 8.182 114.563 1.00 59.34 C
ATOM 7 C4' U B 57 3.106 7.272 115.758 1.00 63.35 C
ATOM 8 O4' U B 57 4.036 6.157 115.731 1.00 67.06 O
ATOM 9 C3' U B 57 3.345 7.987 117.086 1.00 59.14 C
ATOM 10 O3' U B 57 2.365 7.692 118.083 1.00 64.66 O
ATOM 11 C2' U B 57 4.752 7.591 117.523 1.00 61.17 C
ATOM 12 O2' U B 57 4.773 7.343 118.907 1.00 50.25 O
ATOM 13 C1' U B 57 4.928 6.247 116.817 1.00 62.22 C
ATOM 14 N1 U B 57 6.266 5.802 116.405 1.00 65.10 N
ATOM 15 C2 U B 57 7.029 5.133 117.356 1.00 68.46 C
ATOM 16 O2 U B 57 6.645 4.941 118.501 1.00 66.69 O
ATOM 17 N3 U B 57 8.253 4.692 116.917 1.00 66.32 N
ATOM 18 C4 U B 57 8.786 4.851 115.656 1.00 66.96 C
ATOM 19 O4 U B 57 9.906 4.394 115.413 1.00 62.95 O
ATOM 20 C5 U B 57 7.944 5.565 114.735 1.00 67.83 C
ATOM 21 C6 U B 57 6.743 6.008 115.135 1.00 65.88 C
ATOM 22 P A B 58 0.962 8.468 118.112 1.00 56.72 P
ATOM 23 OP1 A B 58 0.227 7.947 119.287 1.00 61.06 O
ATOM 24 OP2 A B 58 0.342 8.384 116.761 1.00 61.15 O
ATOM 25 O5' A B 58 1.357 9.980 118.405 1.00 57.13 O
TER
Atoms:
OP1: (9.114,6.348,108.778)
OP2: (7.512,8.259,108.172)
C3': (10.673,9.509,112.309)
C1': (9.912,11.442,111.175)
C5': (10.898,8.485,110.000)
O6: (6.629,15.289,107.979)
O4': (10.915,10.870,110.370)
C8: (7.874,11.529,109.645)
C2: (9.451,15.581,110.123)
C6: (7.526,14.926,108.747)
C5: (7.816,13.615,109.214)
C4: (8.878,13.438,110.072)
P: (8.893,7.777,108.441)
C4': (11.334,9.599,110.932)
C2': (9.472,10.454,112.255)
O2': (9.334,11.199,113.445)
N1: (8.413,15.863,109.267)
N2: (10.207,16.625,110.513)
N3: (9.730,14.363,110.565)
N7: (7.190,12.405,108.954)
N9: (8.917,12.092,110.335)
O5': (9.534,8.663,109.604)
O3': (11.605,9.839,113.340)
OP2: (7.512,8.259,108.172)
C3': (10.673,9.509,112.309)
C1': (9.912,11.442,111.175)
C5': (10.898,8.485,110.000)
O6: (6.629,15.289,107.979)
O4': (10.915,10.870,110.370)
C8: (7.874,11.529,109.645)
C2: (9.451,15.581,110.123)
C6: (7.526,14.926,108.747)
C5: (7.816,13.615,109.214)
C4: (8.878,13.438,110.072)
P: (8.893,7.777,108.441)
C4': (11.334,9.599,110.932)
C2': (9.472,10.454,112.255)
O2': (9.334,11.199,113.445)
N1: (8.413,15.863,109.267)
N2: (10.207,16.625,110.513)
N3: (9.730,14.363,110.565)
N7: (7.190,12.405,108.954)
N9: (8.917,12.092,110.335)
O5': (9.534,8.663,109.604)
O3': (11.605,9.839,113.340)
C4: (8.786,4.851,115.656)
N3: (8.253,4.692,116.917)
OP1: (6.109,8.540,112.574)
OP2: (4.187,10.231,112.643)
C2: (7.029,5.133,117.356)
C1': (4.928,6.247,116.817)
C3': (3.345,7.987,117.086)
O5': (4.669,8.759,114.609)
O4': (4.036,6.157,115.731)
C5': (3.356,8.182,114.563)
P: (5.280,9.507,113.331)
C4': (3.106,7.272,115.758)
C2': (4.752,7.591,117.523)
O2': (4.773,7.343,118.907)
N1: (6.266,5.802,116.405)
O4: (9.906,4.394,115.413)
O2: (6.645,4.941,118.501)
C6: (6.743,6.008,115.135)
C5: (7.944,5.565,114.735)
O3': (2.365,7.692,118.083)
N3: (8.253,4.692,116.917)
OP1: (6.109,8.540,112.574)
OP2: (4.187,10.231,112.643)
C2: (7.029,5.133,117.356)
C1': (4.928,6.247,116.817)
C3': (3.345,7.987,117.086)
O5': (4.669,8.759,114.609)
O4': (4.036,6.157,115.731)
C5': (3.356,8.182,114.563)
P: (5.280,9.507,113.331)
C4': (3.106,7.272,115.758)
C2': (4.752,7.591,117.523)
O2': (4.773,7.343,118.907)
N1: (6.266,5.802,116.405)
O4: (9.906,4.394,115.413)
O2: (6.645,4.941,118.501)
C6: (6.743,6.008,115.135)
C5: (7.944,5.565,114.735)
O3': (2.365,7.692,118.083)
Image (generated by PyMOL):