Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2D2K:D5:D8
Extra
PDB:
ATOM 1 O3' G A 4 28.611 3.180 39.568 1.00 50.21 O
ATOM 2 P G A 5 27.494 4.325 39.702 1.00 53.80 P
ATOM 3 OP1 G A 5 26.264 3.809 39.044 1.00 49.96 O
ATOM 4 OP2 G A 5 28.094 5.600 39.240 1.00 52.29 O
ATOM 5 O5' G A 5 27.265 4.460 41.271 1.00 47.63 O
ATOM 6 C5' G A 5 27.267 3.310 42.090 1.00 49.07 C
ATOM 7 C4' G A 5 27.650 3.667 43.502 1.00 52.38 C
ATOM 8 O4' G A 5 28.986 4.213 43.525 1.00 51.36 O
ATOM 9 C3' G A 5 26.746 4.752 44.064 1.00 52.83 C
ATOM 10 O3' G A 5 26.414 4.435 45.399 1.00 53.09 O
ATOM 11 C2' G A 5 27.499 6.062 43.893 1.00 51.81 C
ATOM 12 O2' G A 5 27.351 6.880 45.027 1.00 59.14 O
ATOM 13 C1' G A 5 28.939 5.564 43.891 1.00 45.23 C
ATOM 14 N9 G A 5 29.964 6.291 43.171 1.00 40.81 N
ATOM 15 C8 G A 5 29.968 6.692 41.859 1.00 42.60 C
ATOM 16 N7 G A 5 31.054 7.340 41.528 1.00 40.06 N
ATOM 17 C5 G A 5 31.805 7.364 42.698 1.00 41.73 C
ATOM 18 C6 G A 5 33.080 7.936 42.967 1.00 44.06 C
ATOM 19 O6 G A 5 33.821 8.574 42.196 1.00 49.10 O
ATOM 20 N1 G A 5 33.471 7.710 44.287 1.00 43.92 N
ATOM 21 C2 G A 5 32.731 7.027 45.223 1.00 43.96 C
ATOM 22 N2 G A 5 33.284 6.899 46.442 1.00 46.01 N
ATOM 23 N3 G A 5 31.541 6.505 44.985 1.00 42.13 N
ATOM 24 C4 G A 5 31.145 6.711 43.715 1.00 40.53 C
ATOM 25 P U A 6 24.889 4.477 45.875 0.50 57.07 P
ATOM 26 OP1 U A 6 24.720 3.499 46.979 0.50 56.63 O
ATOM 27 OP2 U A 6 24.045 4.373 44.653 0.50 55.21 O
ATOM 28 O5' U A 6 24.712 5.939 46.486 0.50 58.78 O
TER
ATOM 1 O3' A B 7 26.999 10.550 43.250 0.50 54.38 O
ATOM 2 P U B 8 25.457 10.346 42.823 0.50 57.15 P
ATOM 3 OP1 U B 8 25.028 9.053 43.419 0.50 59.81 O
ATOM 4 OP2 U B 8 25.384 10.535 41.353 0.50 57.56 O
ATOM 5 O5' U B 8 24.654 11.537 43.535 0.50 62.40 O
ATOM 6 C5' U B 8 23.620 12.300 42.876 0.50 62.74 C
ATOM 7 C4' U B 8 22.321 12.199 43.660 0.50 63.31 C
ATOM 8 O4' U B 8 21.840 10.850 43.524 0.50 68.02 O
ATOM 9 C3' U B 8 22.460 12.476 45.162 0.50 63.74 C
ATOM 10 O3' U B 8 21.736 13.645 45.609 0.50 60.91 O
ATOM 11 C2' U B 8 21.713 11.331 45.857 0.50 65.66 C
ATOM 12 O2' U B 8 20.669 11.791 46.675 0.50 67.98 O
ATOM 13 C1' U B 8 21.167 10.496 44.695 0.50 70.69 C
ATOM 14 N1 U B 8 21.161 9.036 44.828 0.50 75.84 N
ATOM 15 C2 U B 8 20.000 8.462 45.305 0.50 78.78 C
ATOM 16 O2 U B 8 19.026 9.119 45.640 0.50 79.44 O
ATOM 17 N3 U B 8 20.016 7.093 45.373 0.50 80.77 N
ATOM 18 C4 U B 8 21.055 6.258 45.022 0.50 80.88 C
ATOM 19 O4 U B 8 20.897 5.036 45.089 0.50 82.76 O
ATOM 20 C5 U B 8 22.231 6.933 44.555 0.50 79.50 C
ATOM 21 C6 U B 8 22.242 8.268 44.478 0.50 77.35 C
ATOM 22 P A B 9 22.024 15.112 45.003 1.00 60.75 P
ATOM 23 OP1 A B 9 20.792 15.914 45.199 1.00 62.19 O
ATOM 24 OP2 A B 9 22.605 15.016 43.647 1.00 61.45 O
ATOM 25 O5' A B 9 23.068 15.737 46.016 1.00 54.83 O
TER
ATOM 2 P G A 5 27.494 4.325 39.702 1.00 53.80 P
ATOM 3 OP1 G A 5 26.264 3.809 39.044 1.00 49.96 O
ATOM 4 OP2 G A 5 28.094 5.600 39.240 1.00 52.29 O
ATOM 5 O5' G A 5 27.265 4.460 41.271 1.00 47.63 O
ATOM 6 C5' G A 5 27.267 3.310 42.090 1.00 49.07 C
ATOM 7 C4' G A 5 27.650 3.667 43.502 1.00 52.38 C
ATOM 8 O4' G A 5 28.986 4.213 43.525 1.00 51.36 O
ATOM 9 C3' G A 5 26.746 4.752 44.064 1.00 52.83 C
ATOM 10 O3' G A 5 26.414 4.435 45.399 1.00 53.09 O
ATOM 11 C2' G A 5 27.499 6.062 43.893 1.00 51.81 C
ATOM 12 O2' G A 5 27.351 6.880 45.027 1.00 59.14 O
ATOM 13 C1' G A 5 28.939 5.564 43.891 1.00 45.23 C
ATOM 14 N9 G A 5 29.964 6.291 43.171 1.00 40.81 N
ATOM 15 C8 G A 5 29.968 6.692 41.859 1.00 42.60 C
ATOM 16 N7 G A 5 31.054 7.340 41.528 1.00 40.06 N
ATOM 17 C5 G A 5 31.805 7.364 42.698 1.00 41.73 C
ATOM 18 C6 G A 5 33.080 7.936 42.967 1.00 44.06 C
ATOM 19 O6 G A 5 33.821 8.574 42.196 1.00 49.10 O
ATOM 20 N1 G A 5 33.471 7.710 44.287 1.00 43.92 N
ATOM 21 C2 G A 5 32.731 7.027 45.223 1.00 43.96 C
ATOM 22 N2 G A 5 33.284 6.899 46.442 1.00 46.01 N
ATOM 23 N3 G A 5 31.541 6.505 44.985 1.00 42.13 N
ATOM 24 C4 G A 5 31.145 6.711 43.715 1.00 40.53 C
ATOM 25 P U A 6 24.889 4.477 45.875 0.50 57.07 P
ATOM 26 OP1 U A 6 24.720 3.499 46.979 0.50 56.63 O
ATOM 27 OP2 U A 6 24.045 4.373 44.653 0.50 55.21 O
ATOM 28 O5' U A 6 24.712 5.939 46.486 0.50 58.78 O
TER
ATOM 1 O3' A B 7 26.999 10.550 43.250 0.50 54.38 O
ATOM 2 P U B 8 25.457 10.346 42.823 0.50 57.15 P
ATOM 3 OP1 U B 8 25.028 9.053 43.419 0.50 59.81 O
ATOM 4 OP2 U B 8 25.384 10.535 41.353 0.50 57.56 O
ATOM 5 O5' U B 8 24.654 11.537 43.535 0.50 62.40 O
ATOM 6 C5' U B 8 23.620 12.300 42.876 0.50 62.74 C
ATOM 7 C4' U B 8 22.321 12.199 43.660 0.50 63.31 C
ATOM 8 O4' U B 8 21.840 10.850 43.524 0.50 68.02 O
ATOM 9 C3' U B 8 22.460 12.476 45.162 0.50 63.74 C
ATOM 10 O3' U B 8 21.736 13.645 45.609 0.50 60.91 O
ATOM 11 C2' U B 8 21.713 11.331 45.857 0.50 65.66 C
ATOM 12 O2' U B 8 20.669 11.791 46.675 0.50 67.98 O
ATOM 13 C1' U B 8 21.167 10.496 44.695 0.50 70.69 C
ATOM 14 N1 U B 8 21.161 9.036 44.828 0.50 75.84 N
ATOM 15 C2 U B 8 20.000 8.462 45.305 0.50 78.78 C
ATOM 16 O2 U B 8 19.026 9.119 45.640 0.50 79.44 O
ATOM 17 N3 U B 8 20.016 7.093 45.373 0.50 80.77 N
ATOM 18 C4 U B 8 21.055 6.258 45.022 0.50 80.88 C
ATOM 19 O4 U B 8 20.897 5.036 45.089 0.50 82.76 O
ATOM 20 C5 U B 8 22.231 6.933 44.555 0.50 79.50 C
ATOM 21 C6 U B 8 22.242 8.268 44.478 0.50 77.35 C
ATOM 22 P A B 9 22.024 15.112 45.003 1.00 60.75 P
ATOM 23 OP1 A B 9 20.792 15.914 45.199 1.00 62.19 O
ATOM 24 OP2 A B 9 22.605 15.016 43.647 1.00 61.45 O
ATOM 25 O5' A B 9 23.068 15.737 46.016 1.00 54.83 O
TER
Atoms:
OP1: (26.264,3.809,39.044)
OP2: (28.094,5.600,39.240)
C3': (26.746,4.752,44.064)
C1': (28.939,5.564,43.891)
C5': (27.267,3.310,42.090)
O6: (33.821,8.574,42.196)
O4': (28.986,4.213,43.525)
C8: (29.968,6.692,41.859)
C2: (32.731,7.027,45.223)
C6: (33.080,7.936,42.967)
C5: (31.805,7.364,42.698)
C4: (31.145,6.711,43.715)
P: (27.494,4.325,39.702)
C4': (27.650,3.667,43.502)
C2': (27.499,6.062,43.893)
O2': (27.351,6.880,45.027)
N1: (33.471,7.710,44.287)
N2: (33.284,6.899,46.442)
N3: (31.541,6.505,44.985)
N7: (31.054,7.340,41.528)
N9: (29.964,6.291,43.171)
O5': (27.265,4.460,41.271)
O3': (26.414,4.435,45.399)
OP2: (28.094,5.600,39.240)
C3': (26.746,4.752,44.064)
C1': (28.939,5.564,43.891)
C5': (27.267,3.310,42.090)
O6: (33.821,8.574,42.196)
O4': (28.986,4.213,43.525)
C8: (29.968,6.692,41.859)
C2: (32.731,7.027,45.223)
C6: (33.080,7.936,42.967)
C5: (31.805,7.364,42.698)
C4: (31.145,6.711,43.715)
P: (27.494,4.325,39.702)
C4': (27.650,3.667,43.502)
C2': (27.499,6.062,43.893)
O2': (27.351,6.880,45.027)
N1: (33.471,7.710,44.287)
N2: (33.284,6.899,46.442)
N3: (31.541,6.505,44.985)
N7: (31.054,7.340,41.528)
N9: (29.964,6.291,43.171)
O5': (27.265,4.460,41.271)
O3': (26.414,4.435,45.399)
C4: (21.055,6.258,45.022)
N3: (20.016,7.093,45.373)
OP1: (25.028,9.053,43.419)
OP2: (25.384,10.535,41.353)
C2: (20.000,8.462,45.305)
C1': (21.167,10.496,44.695)
C3': (22.460,12.476,45.162)
O5': (24.654,11.537,43.535)
O4': (21.840,10.850,43.524)
C5': (23.620,12.300,42.876)
P: (25.457,10.346,42.823)
C4': (22.321,12.199,43.660)
C2': (21.713,11.331,45.857)
O2': (20.669,11.791,46.675)
N1: (21.161,9.036,44.828)
O4: (20.897,5.036,45.089)
O2: (19.026,9.119,45.640)
C6: (22.242,8.268,44.478)
C5: (22.231,6.933,44.555)
O3': (21.736,13.645,45.609)
N3: (20.016,7.093,45.373)
OP1: (25.028,9.053,43.419)
OP2: (25.384,10.535,41.353)
C2: (20.000,8.462,45.305)
C1': (21.167,10.496,44.695)
C3': (22.460,12.476,45.162)
O5': (24.654,11.537,43.535)
O4': (21.840,10.850,43.524)
C5': (23.620,12.300,42.876)
P: (25.457,10.346,42.823)
C4': (22.321,12.199,43.660)
C2': (21.713,11.331,45.857)
O2': (20.669,11.791,46.675)
N1: (21.161,9.036,44.828)
O4: (20.897,5.036,45.089)
O2: (19.026,9.119,45.640)
C6: (22.242,8.268,44.478)
C5: (22.231,6.933,44.555)
O3': (21.736,13.645,45.609)
Image (generated by PyMOL):