ClaRNA

Doublet info:

Details

Nucleotide types: GC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1ZFT:D5:D8

Extra

PDB:
ATOM 1 O3' G A 4 28.665 3.520 40.727 1.00 64.46 O
ATOM 2 P G A 5 27.609 4.693 41.033 1.00 66.33 P
ATOM 3 OP1 G A 5 26.309 4.249 40.482 1.00 62.76 O
ATOM 4 OP2 G A 5 28.187 5.979 40.587 1.00 60.02 O
ATOM 5 O5' G A 5 27.496 4.682 42.622 1.00 64.09 O
ATOM 6 C5' G A 5 27.393 3.449 43.322 1.00 60.12 C
ATOM 7 C4' G A 5 27.743 3.637 44.778 1.00 62.11 C
ATOM 8 O4' G A 5 29.059 4.217 44.902 1.00 61.54 O
ATOM 9 C3' G A 5 26.791 4.605 45.469 1.00 61.52 C
ATOM 10 O3' G A 5 26.539 4.074 46.770 1.00 64.98 O
ATOM 11 C2' G A 5 27.499 5.960 45.435 1.00 62.41 C
ATOM 12 O2' G A 5 27.295 6.755 46.580 1.00 60.32 O
ATOM 13 C1' G A 5 28.957 5.514 45.422 1.00 60.98 C
ATOM 14 N9 G A 5 29.989 6.348 44.842 1.00 58.70 N
ATOM 15 C8 G A 5 30.021 6.947 43.609 1.00 59.57 C
ATOM 16 N7 G A 5 31.111 7.636 43.407 1.00 58.76 N
ATOM 17 C5 G A 5 31.836 7.477 44.583 1.00 56.33 C
ATOM 18 C6 G A 5 33.095 8.002 44.969 1.00 55.82 C
ATOM 19 O6 G A 5 33.840 8.759 44.334 1.00 56.03 O
ATOM 20 N1 G A 5 33.457 7.576 46.248 1.00 55.51 N
ATOM 21 C2 G A 5 32.696 6.769 47.059 1.00 58.36 C
ATOM 22 N2 G A 5 33.207 6.472 48.260 1.00 56.90 N
ATOM 23 N3 G A 5 31.517 6.291 46.715 1.00 58.39 N
ATOM 24 C4 G A 5 31.154 6.681 45.472 1.00 57.80 C
ATOM 25 P U A 6 25.125 4.279 47.479 1.00 69.12 P
ATOM 26 OP1 U A 6 24.996 3.188 48.472 1.00 62.43 O
ATOM 27 OP2 U A 6 24.109 4.432 46.413 1.00 62.90 O
ATOM 28 O5' U A 6 25.283 5.638 48.292 1.00 68.69 O
TER

ATOM 1 O3' A B 7 27.040 11.000 45.580 1.00 62.38 O
ATOM 2 P C B 8 25.698 10.329 45.004 1.00 65.21 P
ATOM 3 OP1 C B 8 25.684 8.883 45.365 1.00 66.54 O
ATOM 4 OP2 C B 8 25.673 10.725 43.576 1.00 66.80 O
ATOM 5 O5' C B 8 24.499 11.088 45.739 1.00 67.57 O
ATOM 6 C5' C B 8 23.843 12.215 45.137 1.00 67.53 C
ATOM 7 C4' C B 8 22.425 12.377 45.680 1.00 69.73 C
ATOM 8 O4' C B 8 21.718 11.120 45.512 1.00 70.80 O
ATOM 9 C3' C B 8 22.409 12.670 47.188 1.00 71.40 C
ATOM 10 O3' C B 8 21.369 13.571 47.597 1.00 69.68 O
ATOM 11 C2' C B 8 22.186 11.320 47.860 1.00 71.93 C
ATOM 12 O2' C B 8 21.332 11.426 48.974 1.00 74.16 O
ATOM 13 C1' C B 8 21.424 10.571 46.771 1.00 74.60 C
ATOM 14 N1 C B 8 21.505 9.115 46.737 1.00 77.61 N
ATOM 15 C2 C B 8 20.382 8.398 47.148 1.00 79.84 C
ATOM 16 O2 C B 8 19.352 9.020 47.455 1.00 78.99 O
ATOM 17 N3 C B 8 20.436 7.057 47.195 1.00 81.00 N
ATOM 18 C4 C B 8 21.551 6.424 46.834 1.00 81.69 C
ATOM 19 N4 C B 8 21.562 5.094 46.921 1.00 83.60 N
ATOM 20 C5 C B 8 22.704 7.128 46.373 1.00 80.09 C
ATOM 21 C6 C B 8 22.637 8.462 46.341 1.00 77.98 C
ATOM 22 P A B 9 21.549 15.157 47.489 1.00 73.10 P
ATOM 23 OP1 A B 9 20.397 15.732 48.232 1.00 69.89 O
ATOM 24 OP2 A B 9 21.762 15.528 46.060 1.00 71.94 O
ATOM 25 O5' A B 9 22.858 15.441 48.339 1.00 69.77 O
TER

Atoms:
OP1: (26.309,4.249,40.482)
OP2: (28.187,5.979,40.587)
C3': (26.791,4.605,45.469)
C1': (28.957,5.514,45.422)
C5': (27.393,3.449,43.322)
O6: (33.840,8.759,44.334)
O4': (29.059,4.217,44.902)
C8: (30.021,6.947,43.609)
C2: (32.696,6.769,47.059)
C6: (33.095,8.002,44.969)
C5: (31.836,7.477,44.583)
C4: (31.154,6.681,45.472)
P: (27.609,4.693,41.033)
C4': (27.743,3.637,44.778)
C2': (27.499,5.960,45.435)
O2': (27.295,6.755,46.580)
N1: (33.457,7.576,46.248)
N2: (33.207,6.472,48.260)
N3: (31.517,6.291,46.715)
N7: (31.111,7.636,43.407)
N9: (29.989,6.348,44.842)
O5': (27.496,4.682,42.622)
O3': (26.539,4.074,46.770)
C2: (20.382,8.398,47.148)
OP1: (25.684,8.883,45.365)
OP2: (25.673,10.725,43.576)
C4: (21.551,6.424,46.834)
O5': (24.499,11.088,45.739)
C3': (22.409,12.670,47.188)
C1': (21.424,10.571,46.771)
O4': (21.718,11.120,45.512)
C5': (23.843,12.215,45.137)
P: (25.698,10.329,45.004)
O2: (19.352,9.020,47.455)
C4': (22.425,12.377,45.680)
C2': (22.186,11.320,47.860)
O2': (21.332,11.426,48.974)
N1: (21.505,9.115,46.737)
N3: (20.436,7.057,47.195)
N4: (21.562,5.094,46.921)
C6: (22.637,8.462,46.341)
C5: (22.704,7.128,46.373)
O3': (21.369,13.571,47.597)
Image (generated by PyMOL):
PyMOL image
show in jmol