ClaRNA

Doublet info:

Details

Nucleotide types: GC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2FGP:D5:D8

Extra

PDB:
ATOM 1 O3' G A 4 28.640 3.657 39.278 1.00 81.05 O
ATOM 2 P G A 5 27.511 4.790 39.512 1.00 81.16 P
ATOM 3 OP1 G A 5 26.235 4.254 38.976 1.00 80.43 O
ATOM 4 OP2 G A 5 28.013 6.097 39.016 1.00 82.56 O
ATOM 5 O5' G A 5 27.380 4.838 41.098 1.00 77.25 O
ATOM 6 C5' G A 5 27.405 3.628 41.844 1.00 74.83 C
ATOM 7 C4' G A 5 27.756 3.897 43.288 1.00 78.66 C
ATOM 8 O4' G A 5 29.054 4.527 43.386 1.00 81.83 O
ATOM 9 C3' G A 5 26.769 4.864 43.926 1.00 78.56 C
ATOM 10 O3' G A 5 26.545 4.385 45.255 1.00 81.15 O
ATOM 11 C2' G A 5 27.433 6.238 43.812 1.00 77.40 C
ATOM 12 O2' G A 5 27.152 7.124 44.867 1.00 76.74 O
ATOM 13 C1' G A 5 28.907 5.841 43.851 1.00 74.25 C
ATOM 14 N9 G A 5 29.934 6.673 43.258 1.00 67.49 N
ATOM 15 C8 G A 5 29.966 7.232 42.010 1.00 68.63 C
ATOM 16 N7 G A 5 31.035 7.948 41.802 1.00 68.15 N
ATOM 17 C5 G A 5 31.746 7.849 42.989 1.00 65.50 C
ATOM 18 C6 G A 5 32.970 8.440 43.377 1.00 65.20 C
ATOM 19 O6 G A 5 33.686 9.225 42.732 1.00 65.03 O
ATOM 20 N1 G A 5 33.333 8.059 44.669 1.00 66.54 N
ATOM 21 C2 G A 5 32.596 7.236 45.489 1.00 69.50 C
ATOM 22 N2 G A 5 33.108 6.985 46.704 1.00 69.55 N
ATOM 23 N3 G A 5 31.442 6.702 45.141 1.00 66.98 N
ATOM 24 C4 G A 5 31.082 7.050 43.888 1.00 65.70 C
ATOM 25 P U A 6 25.136 4.579 45.968 1.00 86.24 P
ATOM 26 OP1 U A 6 24.968 3.453 46.917 1.00 79.61 O
ATOM 27 OP2 U A 6 24.147 4.796 44.889 1.00 80.75 O
ATOM 28 O5' U A 6 25.321 5.910 46.823 1.00 91.76 O
TER

ATOM 1 O3' A B 7 26.975 10.996 43.661 1.00 76.64 O
ATOM 2 P C B 8 25.592 10.359 43.188 1.00 80.27 P
ATOM 3 OP1 C B 8 25.530 8.965 43.699 1.00 82.44 O
ATOM 4 OP2 C B 8 25.551 10.604 41.727 1.00 78.69 O
ATOM 5 O5' C B 8 24.464 11.259 43.873 1.00 84.42 O
ATOM 6 C5' C B 8 23.751 12.252 43.116 1.00 85.19 C
ATOM 7 C4' C B 8 22.327 12.418 43.630 1.00 85.85 C
ATOM 8 O4' C B 8 21.654 11.132 43.584 1.00 86.42 O
ATOM 9 C3' C B 8 22.321 12.848 45.098 1.00 87.11 C
ATOM 10 O3' C B 8 21.269 13.774 45.397 1.00 85.27 O
ATOM 11 C2' C B 8 22.142 11.556 45.890 1.00 87.68 C
ATOM 12 O2' C B 8 21.316 11.725 47.016 1.00 93.41 O
ATOM 13 C1' C B 8 21.372 10.701 44.889 1.00 89.01 C
ATOM 14 N1 C B 8 21.430 9.240 44.982 1.00 92.42 N
ATOM 15 C2 C B 8 20.232 8.552 45.227 1.00 93.49 C
ATOM 16 O2 C B 8 19.174 9.194 45.299 1.00 92.25 O
ATOM 17 N3 C B 8 20.252 7.213 45.371 1.00 95.33 N
ATOM 18 C4 C B 8 21.405 6.552 45.268 1.00 96.74 C
ATOM 19 N4 C B 8 21.378 5.225 45.428 1.00 98.87 N
ATOM 20 C5 C B 8 22.640 7.223 44.997 1.00 96.05 C
ATOM 21 C6 C B 8 22.604 8.557 44.861 1.00 94.72 C
ATOM 22 P A B 9 21.497 15.358 45.307 1.00 90.56 P
ATOM 23 OP1 A B 9 20.302 15.960 45.937 1.00 86.75 O
ATOM 24 OP2 A B 9 21.856 15.737 43.911 1.00 88.38 O
ATOM 25 O5' A B 9 22.725 15.632 46.276 1.00 88.60 O
TER

Atoms:
OP1: (26.235,4.254,38.976)
OP2: (28.013,6.097,39.016)
C3': (26.769,4.864,43.926)
C1': (28.907,5.841,43.851)
C5': (27.405,3.628,41.844)
O6: (33.686,9.225,42.732)
O4': (29.054,4.527,43.386)
C8: (29.966,7.232,42.010)
C2: (32.596,7.236,45.489)
C6: (32.970,8.440,43.377)
C5: (31.746,7.849,42.989)
C4: (31.082,7.050,43.888)
P: (27.511,4.790,39.512)
C4': (27.756,3.897,43.288)
C2': (27.433,6.238,43.812)
O2': (27.152,7.124,44.867)
N1: (33.333,8.059,44.669)
N2: (33.108,6.985,46.704)
N3: (31.442,6.702,45.141)
N7: (31.035,7.948,41.802)
N9: (29.934,6.673,43.258)
O5': (27.380,4.838,41.098)
O3': (26.545,4.385,45.255)
C2: (20.232,8.552,45.227)
OP1: (25.530,8.965,43.699)
OP2: (25.551,10.604,41.727)
C4: (21.405,6.552,45.268)
O5': (24.464,11.259,43.873)
C3': (22.321,12.848,45.098)
C1': (21.372,10.701,44.889)
O4': (21.654,11.132,43.584)
C5': (23.751,12.252,43.116)
P: (25.592,10.359,43.188)
O2: (19.174,9.194,45.299)
C4': (22.327,12.418,43.630)
C2': (22.142,11.556,45.890)
O2': (21.316,11.725,47.016)
N1: (21.430,9.240,44.982)
N3: (20.252,7.213,45.371)
N4: (21.378,5.225,45.428)
C6: (22.604,8.557,44.861)
C5: (22.640,7.223,44.997)
O3': (21.269,13.774,45.397)
Image (generated by PyMOL):
PyMOL image
show in jmol