Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3B5A:C5:C8
Extra
PDB:
ATOM 1 O3' G A 4 28.620 3.321 40.365 1.00 69.08 O
ATOM 2 P G A 5 27.550 4.396 40.751 1.00 72.44 P
ATOM 3 OP1 G A 5 26.218 3.879 40.320 1.00 71.79 O
ATOM 4 OP2 G A 5 27.985 5.735 40.216 1.00 71.23 O
ATOM 5 O5' G A 5 27.614 4.438 42.343 1.00 67.72 O
ATOM 6 C5' G A 5 27.427 3.217 43.082 1.00 68.40 C
ATOM 7 C4' G A 5 27.682 3.463 44.564 1.00 71.38 C
ATOM 8 O4' G A 5 29.002 4.052 44.748 1.00 68.03 O
ATOM 9 C3' G A 5 26.762 4.396 45.280 1.00 70.09 C
ATOM 10 O3' G A 5 26.601 3.998 46.646 1.00 77.16 O
ATOM 11 C2' G A 5 27.411 5.770 45.069 1.00 69.68 C
ATOM 12 O2' G A 5 26.994 6.765 45.992 1.00 69.26 O
ATOM 13 C1' G A 5 28.873 5.384 45.209 1.00 67.49 C
ATOM 14 N9 G A 5 29.867 6.236 44.527 1.00 62.34 N
ATOM 15 C8 G A 5 29.873 6.786 43.264 1.00 61.17 C
ATOM 16 N7 G A 5 30.944 7.490 43.021 1.00 60.58 N
ATOM 17 C5 G A 5 31.679 7.396 44.199 1.00 58.86 C
ATOM 18 C6 G A 5 32.922 7.971 44.551 1.00 58.27 C
ATOM 19 O6 G A 5 33.633 8.706 43.882 1.00 59.84 O
ATOM 20 N1 G A 5 33.316 7.591 45.832 1.00 53.23 N
ATOM 21 C2 G A 5 32.592 6.770 46.668 1.00 56.76 C
ATOM 22 N2 G A 5 33.133 6.549 47.859 1.00 52.38 N
ATOM 23 N3 G A 5 31.420 6.225 46.358 1.00 56.15 N
ATOM 24 C4 G A 5 31.030 6.608 45.120 1.00 58.13 C
ATOM 25 P U A 6 25.144 3.766 47.276 1.00 80.28 P
ATOM 26 OP1 U A 6 25.217 2.778 48.364 1.00 76.85 O
ATOM 27 OP2 U A 6 24.163 3.568 46.212 1.00 78.61 O
ATOM 28 O5' U A 6 24.828 5.215 47.892 1.00 83.48 O
TER
ATOM 1 O3' G B 7 26.915 10.245 45.156 1.00 83.58 O
ATOM 2 P C B 8 25.520 9.751 44.451 1.00 89.49 P
ATOM 3 OP1 C B 8 25.293 8.327 44.709 1.00 87.79 O
ATOM 4 OP2 C B 8 25.600 10.202 43.042 1.00 91.45 O
ATOM 5 O5' C B 8 24.378 10.629 45.154 1.00 91.06 O
ATOM 6 C5' C B 8 23.661 11.560 44.400 1.00 90.58 C
ATOM 7 C4' C B 8 22.206 11.696 44.828 1.00 92.02 C
ATOM 8 O4' C B 8 21.582 10.368 44.895 1.00 92.53 O
ATOM 9 C3' C B 8 22.144 12.243 46.276 1.00 90.68 C
ATOM 10 O3' C B 8 21.217 13.367 46.368 1.00 87.52 O
ATOM 11 C2' C B 8 21.842 11.034 47.161 1.00 91.71 C
ATOM 12 O2' C B 8 21.141 11.303 48.335 1.00 88.57 O
ATOM 13 C1' C B 8 21.056 10.172 46.191 1.00 95.18 C
ATOM 14 N1 C B 8 20.890 8.756 46.553 1.00100.72 N
ATOM 15 C2 C B 8 19.649 8.373 47.075 1.00102.66 C
ATOM 16 O2 C B 8 18.728 9.196 47.126 1.00103.00 O
ATOM 17 N3 C B 8 19.498 7.105 47.527 1.00104.33 N
ATOM 18 C4 C B 8 20.510 6.244 47.445 1.00104.55 C
ATOM 19 N4 C B 8 20.306 5.019 47.938 1.00105.80 N
ATOM 20 C5 C B 8 21.766 6.606 46.872 1.00103.10 C
ATOM 21 C6 C B 8 21.910 7.873 46.437 1.00101.79 C
ATOM 22 P A B 9 21.477 14.642 47.338 1.00 82.86 P
ATOM 23 OP1 A B 9 20.384 14.612 48.345 1.00 80.55 O
ATOM 24 OP2 A B 9 21.637 15.821 46.449 1.00 83.32 O
ATOM 25 O5' A B 9 22.856 14.411 48.087 1.00 78.43 O
TER
ATOM 2 P G A 5 27.550 4.396 40.751 1.00 72.44 P
ATOM 3 OP1 G A 5 26.218 3.879 40.320 1.00 71.79 O
ATOM 4 OP2 G A 5 27.985 5.735 40.216 1.00 71.23 O
ATOM 5 O5' G A 5 27.614 4.438 42.343 1.00 67.72 O
ATOM 6 C5' G A 5 27.427 3.217 43.082 1.00 68.40 C
ATOM 7 C4' G A 5 27.682 3.463 44.564 1.00 71.38 C
ATOM 8 O4' G A 5 29.002 4.052 44.748 1.00 68.03 O
ATOM 9 C3' G A 5 26.762 4.396 45.280 1.00 70.09 C
ATOM 10 O3' G A 5 26.601 3.998 46.646 1.00 77.16 O
ATOM 11 C2' G A 5 27.411 5.770 45.069 1.00 69.68 C
ATOM 12 O2' G A 5 26.994 6.765 45.992 1.00 69.26 O
ATOM 13 C1' G A 5 28.873 5.384 45.209 1.00 67.49 C
ATOM 14 N9 G A 5 29.867 6.236 44.527 1.00 62.34 N
ATOM 15 C8 G A 5 29.873 6.786 43.264 1.00 61.17 C
ATOM 16 N7 G A 5 30.944 7.490 43.021 1.00 60.58 N
ATOM 17 C5 G A 5 31.679 7.396 44.199 1.00 58.86 C
ATOM 18 C6 G A 5 32.922 7.971 44.551 1.00 58.27 C
ATOM 19 O6 G A 5 33.633 8.706 43.882 1.00 59.84 O
ATOM 20 N1 G A 5 33.316 7.591 45.832 1.00 53.23 N
ATOM 21 C2 G A 5 32.592 6.770 46.668 1.00 56.76 C
ATOM 22 N2 G A 5 33.133 6.549 47.859 1.00 52.38 N
ATOM 23 N3 G A 5 31.420 6.225 46.358 1.00 56.15 N
ATOM 24 C4 G A 5 31.030 6.608 45.120 1.00 58.13 C
ATOM 25 P U A 6 25.144 3.766 47.276 1.00 80.28 P
ATOM 26 OP1 U A 6 25.217 2.778 48.364 1.00 76.85 O
ATOM 27 OP2 U A 6 24.163 3.568 46.212 1.00 78.61 O
ATOM 28 O5' U A 6 24.828 5.215 47.892 1.00 83.48 O
TER
ATOM 1 O3' G B 7 26.915 10.245 45.156 1.00 83.58 O
ATOM 2 P C B 8 25.520 9.751 44.451 1.00 89.49 P
ATOM 3 OP1 C B 8 25.293 8.327 44.709 1.00 87.79 O
ATOM 4 OP2 C B 8 25.600 10.202 43.042 1.00 91.45 O
ATOM 5 O5' C B 8 24.378 10.629 45.154 1.00 91.06 O
ATOM 6 C5' C B 8 23.661 11.560 44.400 1.00 90.58 C
ATOM 7 C4' C B 8 22.206 11.696 44.828 1.00 92.02 C
ATOM 8 O4' C B 8 21.582 10.368 44.895 1.00 92.53 O
ATOM 9 C3' C B 8 22.144 12.243 46.276 1.00 90.68 C
ATOM 10 O3' C B 8 21.217 13.367 46.368 1.00 87.52 O
ATOM 11 C2' C B 8 21.842 11.034 47.161 1.00 91.71 C
ATOM 12 O2' C B 8 21.141 11.303 48.335 1.00 88.57 O
ATOM 13 C1' C B 8 21.056 10.172 46.191 1.00 95.18 C
ATOM 14 N1 C B 8 20.890 8.756 46.553 1.00100.72 N
ATOM 15 C2 C B 8 19.649 8.373 47.075 1.00102.66 C
ATOM 16 O2 C B 8 18.728 9.196 47.126 1.00103.00 O
ATOM 17 N3 C B 8 19.498 7.105 47.527 1.00104.33 N
ATOM 18 C4 C B 8 20.510 6.244 47.445 1.00104.55 C
ATOM 19 N4 C B 8 20.306 5.019 47.938 1.00105.80 N
ATOM 20 C5 C B 8 21.766 6.606 46.872 1.00103.10 C
ATOM 21 C6 C B 8 21.910 7.873 46.437 1.00101.79 C
ATOM 22 P A B 9 21.477 14.642 47.338 1.00 82.86 P
ATOM 23 OP1 A B 9 20.384 14.612 48.345 1.00 80.55 O
ATOM 24 OP2 A B 9 21.637 15.821 46.449 1.00 83.32 O
ATOM 25 O5' A B 9 22.856 14.411 48.087 1.00 78.43 O
TER
Atoms:
OP1: (26.218,3.879,40.320)
OP2: (27.985,5.735,40.216)
C3': (26.762,4.396,45.280)
C1': (28.873,5.384,45.209)
C5': (27.427,3.217,43.082)
O6: (33.633,8.706,43.882)
O4': (29.002,4.052,44.748)
C8: (29.873,6.786,43.264)
C2: (32.592,6.770,46.668)
C6: (32.922,7.971,44.551)
C5: (31.679,7.396,44.199)
C4: (31.030,6.608,45.120)
P: (27.550,4.396,40.751)
C4': (27.682,3.463,44.564)
C2': (27.411,5.770,45.069)
O2': (26.994,6.765,45.992)
N1: (33.316,7.591,45.832)
N2: (33.133,6.549,47.859)
N3: (31.420,6.225,46.358)
N7: (30.944,7.490,43.021)
N9: (29.867,6.236,44.527)
O5': (27.614,4.438,42.343)
O3': (26.601,3.998,46.646)
OP2: (27.985,5.735,40.216)
C3': (26.762,4.396,45.280)
C1': (28.873,5.384,45.209)
C5': (27.427,3.217,43.082)
O6: (33.633,8.706,43.882)
O4': (29.002,4.052,44.748)
C8: (29.873,6.786,43.264)
C2: (32.592,6.770,46.668)
C6: (32.922,7.971,44.551)
C5: (31.679,7.396,44.199)
C4: (31.030,6.608,45.120)
P: (27.550,4.396,40.751)
C4': (27.682,3.463,44.564)
C2': (27.411,5.770,45.069)
O2': (26.994,6.765,45.992)
N1: (33.316,7.591,45.832)
N2: (33.133,6.549,47.859)
N3: (31.420,6.225,46.358)
N7: (30.944,7.490,43.021)
N9: (29.867,6.236,44.527)
O5': (27.614,4.438,42.343)
O3': (26.601,3.998,46.646)
C2: (19.649,8.373,47.075)
OP1: (25.293,8.327,44.709)
OP2: (25.600,10.202,43.042)
C4: (20.510,6.244,47.445)
O5': (24.378,10.629,45.154)
C3': (22.144,12.243,46.276)
C1': (21.056,10.172,46.191)
O4': (21.582,10.368,44.895)
C5': (23.661,11.560,44.400)
P: (25.520,9.751,44.451)
O2: (18.728,9.196,47.126)
C4': (22.206,11.696,44.828)
C2': (21.842,11.034,47.161)
O2': (21.141,11.303,48.335)
N1: (20.890,8.756,46.553)
N3: (19.498,7.105,47.527)
N4: (20.306,5.019,47.938)
C6: (21.910,7.873,46.437)
C5: (21.766,6.606,46.872)
O3': (21.217,13.367,46.368)
OP1: (25.293,8.327,44.709)
OP2: (25.600,10.202,43.042)
C4: (20.510,6.244,47.445)
O5': (24.378,10.629,45.154)
C3': (22.144,12.243,46.276)
C1': (21.056,10.172,46.191)
O4': (21.582,10.368,44.895)
C5': (23.661,11.560,44.400)
P: (25.520,9.751,44.451)
O2: (18.728,9.196,47.126)
C4': (22.206,11.696,44.828)
C2': (21.842,11.034,47.161)
O2': (21.141,11.303,48.335)
N1: (20.890,8.756,46.553)
N3: (19.498,7.105,47.527)
N4: (20.306,5.019,47.938)
C6: (21.910,7.873,46.437)
C5: (21.766,6.606,46.872)
O3': (21.217,13.367,46.368)
Image (generated by PyMOL):