Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3B5S:C5:C8
Extra
PDB:
ATOM 1 O3' G A 4 28.535 3.872 40.830 1.00 64.43 O
ATOM 2 P G A 5 27.433 4.960 41.276 1.00 67.94 P
ATOM 3 OP1 G A 5 26.124 4.370 40.936 1.00 71.07 O
ATOM 4 OP2 G A 5 27.798 6.279 40.733 1.00 67.83 O
ATOM 5 O5' G A 5 27.517 4.959 42.866 1.00 64.02 O
ATOM 6 C5' G A 5 27.232 3.772 43.615 1.00 62.38 C
ATOM 7 C4' G A 5 27.569 3.976 45.069 1.00 64.22 C
ATOM 8 O4' G A 5 28.893 4.532 45.203 1.00 59.49 O
ATOM 9 C3' G A 5 26.624 4.991 45.701 1.00 61.68 C
ATOM 10 O3' G A 5 26.491 4.562 47.069 1.00 65.05 O
ATOM 11 C2' G A 5 27.367 6.320 45.600 1.00 61.51 C
ATOM 12 O2' G A 5 27.110 7.222 46.643 1.00 63.93 O
ATOM 13 C1' G A 5 28.817 5.844 45.684 1.00 59.32 C
ATOM 14 N9 G A 5 29.880 6.635 45.096 1.00 53.63 N
ATOM 15 C8 G A 5 29.909 7.206 43.855 1.00 55.26 C
ATOM 16 N7 G A 5 30.994 7.891 43.639 1.00 56.38 N
ATOM 17 C5 G A 5 31.721 7.759 44.807 1.00 55.25 C
ATOM 18 C6 G A 5 32.954 8.310 45.171 1.00 56.57 C
ATOM 19 O6 G A 5 33.668 9.076 44.517 1.00 61.27 O
ATOM 20 N1 G A 5 33.344 7.914 46.449 1.00 53.96 N
ATOM 21 C2 G A 5 32.622 7.105 47.279 1.00 54.09 C
ATOM 22 N2 G A 5 33.183 6.845 48.471 1.00 51.48 N
ATOM 23 N3 G A 5 31.443 6.595 46.956 1.00 52.34 N
ATOM 24 C4 G A 5 31.057 6.964 45.708 1.00 52.55 C
ATOM 25 P U A 6 25.074 4.574 47.840 1.00 67.03 P
ATOM 26 OP1 U A 6 25.183 3.487 48.847 1.00 63.01 O
ATOM 27 OP2 U A 6 23.984 4.552 46.826 1.00 61.85 O
ATOM 28 O5' U A 6 25.053 5.977 48.609 1.00 69.04 O
TER
ATOM 1 P C B 8 25.640 10.577 45.147 1.00 63.34 P
ATOM 2 OP1 C B 8 25.747 9.171 45.632 1.00 64.89 O
ATOM 3 OP2 C B 8 25.734 10.857 43.681 1.00 62.72 O
ATOM 4 O5' C B 8 24.277 11.198 45.715 1.00 64.95 O
ATOM 5 C5' C B 8 23.738 12.464 45.291 1.00 65.84 C
ATOM 6 C4' C B 8 22.358 12.673 45.916 1.00 70.11 C
ATOM 7 O4' C B 8 21.575 11.457 45.761 1.00 72.95 O
ATOM 8 C3' C B 8 22.461 12.903 47.433 1.00 70.08 C
ATOM 9 O3' C B 8 21.415 13.738 47.929 1.00 66.69 O
ATOM 10 C2' C B 8 22.232 11.539 48.075 1.00 70.33 C
ATOM 11 O2' C B 8 21.531 11.605 49.300 1.00 73.19 O
ATOM 12 C1' C B 8 21.327 10.892 47.032 1.00 70.71 C
ATOM 13 N1 C B 8 21.305 9.437 46.983 1.00 75.50 N
ATOM 14 C2 C B 8 20.141 8.836 47.348 1.00 77.90 C
ATOM 15 O2 C B 8 19.142 9.541 47.545 1.00 77.55 O
ATOM 16 N3 C B 8 20.122 7.489 47.467 1.00 77.85 N
ATOM 17 C4 C B 8 21.206 6.756 47.202 1.00 77.87 C
ATOM 18 N4 C B 8 21.090 5.436 47.319 1.00 75.27 N
ATOM 19 C5 C B 8 22.419 7.359 46.784 1.00 76.62 C
ATOM 20 C6 C B 8 22.427 8.712 46.703 1.00 75.81 C
ATOM 21 P A B 9 21.492 15.331 47.869 1.00 71.65 P
ATOM 22 OP1 A B 9 20.217 15.676 48.579 1.00 68.74 O
ATOM 23 OP2 A B 9 21.751 15.864 46.502 1.00 63.59 O
ATOM 24 O5' A B 9 22.719 15.680 48.809 1.00 65.16 O
TER
ATOM 2 P G A 5 27.433 4.960 41.276 1.00 67.94 P
ATOM 3 OP1 G A 5 26.124 4.370 40.936 1.00 71.07 O
ATOM 4 OP2 G A 5 27.798 6.279 40.733 1.00 67.83 O
ATOM 5 O5' G A 5 27.517 4.959 42.866 1.00 64.02 O
ATOM 6 C5' G A 5 27.232 3.772 43.615 1.00 62.38 C
ATOM 7 C4' G A 5 27.569 3.976 45.069 1.00 64.22 C
ATOM 8 O4' G A 5 28.893 4.532 45.203 1.00 59.49 O
ATOM 9 C3' G A 5 26.624 4.991 45.701 1.00 61.68 C
ATOM 10 O3' G A 5 26.491 4.562 47.069 1.00 65.05 O
ATOM 11 C2' G A 5 27.367 6.320 45.600 1.00 61.51 C
ATOM 12 O2' G A 5 27.110 7.222 46.643 1.00 63.93 O
ATOM 13 C1' G A 5 28.817 5.844 45.684 1.00 59.32 C
ATOM 14 N9 G A 5 29.880 6.635 45.096 1.00 53.63 N
ATOM 15 C8 G A 5 29.909 7.206 43.855 1.00 55.26 C
ATOM 16 N7 G A 5 30.994 7.891 43.639 1.00 56.38 N
ATOM 17 C5 G A 5 31.721 7.759 44.807 1.00 55.25 C
ATOM 18 C6 G A 5 32.954 8.310 45.171 1.00 56.57 C
ATOM 19 O6 G A 5 33.668 9.076 44.517 1.00 61.27 O
ATOM 20 N1 G A 5 33.344 7.914 46.449 1.00 53.96 N
ATOM 21 C2 G A 5 32.622 7.105 47.279 1.00 54.09 C
ATOM 22 N2 G A 5 33.183 6.845 48.471 1.00 51.48 N
ATOM 23 N3 G A 5 31.443 6.595 46.956 1.00 52.34 N
ATOM 24 C4 G A 5 31.057 6.964 45.708 1.00 52.55 C
ATOM 25 P U A 6 25.074 4.574 47.840 1.00 67.03 P
ATOM 26 OP1 U A 6 25.183 3.487 48.847 1.00 63.01 O
ATOM 27 OP2 U A 6 23.984 4.552 46.826 1.00 61.85 O
ATOM 28 O5' U A 6 25.053 5.977 48.609 1.00 69.04 O
TER
ATOM 1 P C B 8 25.640 10.577 45.147 1.00 63.34 P
ATOM 2 OP1 C B 8 25.747 9.171 45.632 1.00 64.89 O
ATOM 3 OP2 C B 8 25.734 10.857 43.681 1.00 62.72 O
ATOM 4 O5' C B 8 24.277 11.198 45.715 1.00 64.95 O
ATOM 5 C5' C B 8 23.738 12.464 45.291 1.00 65.84 C
ATOM 6 C4' C B 8 22.358 12.673 45.916 1.00 70.11 C
ATOM 7 O4' C B 8 21.575 11.457 45.761 1.00 72.95 O
ATOM 8 C3' C B 8 22.461 12.903 47.433 1.00 70.08 C
ATOM 9 O3' C B 8 21.415 13.738 47.929 1.00 66.69 O
ATOM 10 C2' C B 8 22.232 11.539 48.075 1.00 70.33 C
ATOM 11 O2' C B 8 21.531 11.605 49.300 1.00 73.19 O
ATOM 12 C1' C B 8 21.327 10.892 47.032 1.00 70.71 C
ATOM 13 N1 C B 8 21.305 9.437 46.983 1.00 75.50 N
ATOM 14 C2 C B 8 20.141 8.836 47.348 1.00 77.90 C
ATOM 15 O2 C B 8 19.142 9.541 47.545 1.00 77.55 O
ATOM 16 N3 C B 8 20.122 7.489 47.467 1.00 77.85 N
ATOM 17 C4 C B 8 21.206 6.756 47.202 1.00 77.87 C
ATOM 18 N4 C B 8 21.090 5.436 47.319 1.00 75.27 N
ATOM 19 C5 C B 8 22.419 7.359 46.784 1.00 76.62 C
ATOM 20 C6 C B 8 22.427 8.712 46.703 1.00 75.81 C
ATOM 21 P A B 9 21.492 15.331 47.869 1.00 71.65 P
ATOM 22 OP1 A B 9 20.217 15.676 48.579 1.00 68.74 O
ATOM 23 OP2 A B 9 21.751 15.864 46.502 1.00 63.59 O
ATOM 24 O5' A B 9 22.719 15.680 48.809 1.00 65.16 O
TER
Atoms:
OP1: (26.124,4.370,40.936)
OP2: (27.798,6.279,40.733)
C3': (26.624,4.991,45.701)
C1': (28.817,5.844,45.684)
C5': (27.232,3.772,43.615)
O6: (33.668,9.076,44.517)
O4': (28.893,4.532,45.203)
C8: (29.909,7.206,43.855)
C2: (32.622,7.105,47.279)
C6: (32.954,8.310,45.171)
C5: (31.721,7.759,44.807)
C4: (31.057,6.964,45.708)
P: (27.433,4.960,41.276)
C4': (27.569,3.976,45.069)
C2': (27.367,6.320,45.600)
O2': (27.110,7.222,46.643)
N1: (33.344,7.914,46.449)
N2: (33.183,6.845,48.471)
N3: (31.443,6.595,46.956)
N7: (30.994,7.891,43.639)
N9: (29.880,6.635,45.096)
O5': (27.517,4.959,42.866)
O3': (26.491,4.562,47.069)
OP2: (27.798,6.279,40.733)
C3': (26.624,4.991,45.701)
C1': (28.817,5.844,45.684)
C5': (27.232,3.772,43.615)
O6: (33.668,9.076,44.517)
O4': (28.893,4.532,45.203)
C8: (29.909,7.206,43.855)
C2: (32.622,7.105,47.279)
C6: (32.954,8.310,45.171)
C5: (31.721,7.759,44.807)
C4: (31.057,6.964,45.708)
P: (27.433,4.960,41.276)
C4': (27.569,3.976,45.069)
C2': (27.367,6.320,45.600)
O2': (27.110,7.222,46.643)
N1: (33.344,7.914,46.449)
N2: (33.183,6.845,48.471)
N3: (31.443,6.595,46.956)
N7: (30.994,7.891,43.639)
N9: (29.880,6.635,45.096)
O5': (27.517,4.959,42.866)
O3': (26.491,4.562,47.069)
C2: (20.141,8.836,47.348)
OP1: (25.747,9.171,45.632)
OP2: (25.734,10.857,43.681)
C4: (21.206,6.756,47.202)
O5': (24.277,11.198,45.715)
C3': (22.461,12.903,47.433)
C1': (21.327,10.892,47.032)
O4': (21.575,11.457,45.761)
C5': (23.738,12.464,45.291)
P: (25.640,10.577,45.147)
O2: (19.142,9.541,47.545)
C4': (22.358,12.673,45.916)
C2': (22.232,11.539,48.075)
O2': (21.531,11.605,49.300)
N1: (21.305,9.437,46.983)
N3: (20.122,7.489,47.467)
N4: (21.090,5.436,47.319)
C6: (22.427,8.712,46.703)
C5: (22.419,7.359,46.784)
O3': (21.415,13.738,47.929)
OP1: (25.747,9.171,45.632)
OP2: (25.734,10.857,43.681)
C4: (21.206,6.756,47.202)
O5': (24.277,11.198,45.715)
C3': (22.461,12.903,47.433)
C1': (21.327,10.892,47.032)
O4': (21.575,11.457,45.761)
C5': (23.738,12.464,45.291)
P: (25.640,10.577,45.147)
O2: (19.142,9.541,47.545)
C4': (22.358,12.673,45.916)
C2': (22.232,11.539,48.075)
O2': (21.531,11.605,49.300)
N1: (21.305,9.437,46.983)
N3: (20.122,7.489,47.467)
N4: (21.090,5.436,47.319)
C6: (22.427,8.712,46.703)
C5: (22.419,7.359,46.784)
O3': (21.415,13.738,47.929)
Image (generated by PyMOL):