ClaRNA

Doublet info:

Details

Nucleotide types: GC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3BBK:C5:C8

Extra

PDB:
ATOM 1 O3' G A 4 28.828 3.833 41.483 1.00 83.91 O
ATOM 2 P G A 5 27.773 4.950 41.955 1.00 86.26 P
ATOM 3 OP1 G A 5 26.445 4.543 41.450 1.00 82.31 O
ATOM 4 OP2 G A 5 28.322 6.258 41.569 1.00 85.68 O
ATOM 5 O5' G A 5 27.786 4.849 43.547 1.00 82.73 O
ATOM 6 C5' G A 5 27.651 3.588 44.203 1.00 81.11 C
ATOM 7 C4' G A 5 28.058 3.704 45.653 1.00 82.83 C
ATOM 8 O4' G A 5 29.377 4.279 45.739 1.00 84.59 O
ATOM 9 C3' G A 5 27.140 4.609 46.461 1.00 81.35 C
ATOM 10 O3' G A 5 27.205 4.017 47.757 1.00 84.58 O
ATOM 11 C2' G A 5 27.823 5.973 46.427 1.00 82.70 C
ATOM 12 O2' G A 5 27.705 6.703 47.620 1.00 88.40 O
ATOM 13 C1' G A 5 29.289 5.552 46.308 1.00 80.55 C
ATOM 14 N9 G A 5 30.277 6.416 45.684 1.00 77.55 N
ATOM 15 C8 G A 5 30.230 6.998 44.443 1.00 76.80 C
ATOM 16 N7 G A 5 31.291 7.709 44.176 1.00 76.57 N
ATOM 17 C5 G A 5 32.081 7.596 45.318 1.00 73.99 C
ATOM 18 C6 G A 5 33.349 8.162 45.627 1.00 72.34 C
ATOM 19 O6 G A 5 34.027 8.936 44.945 1.00 69.98 O
ATOM 20 N1 G A 5 33.805 7.758 46.883 1.00 71.07 N
ATOM 21 C2 G A 5 33.124 6.936 47.738 1.00 73.38 C
ATOM 22 N2 G A 5 33.731 6.643 48.896 1.00 73.68 N
ATOM 23 N3 G A 5 31.931 6.430 47.475 1.00 75.16 N
ATOM 24 C4 G A 5 31.473 6.796 46.252 1.00 74.87 C
ATOM 25 P U A 6 25.915 3.887 48.667 1.00 86.36 P
ATOM 26 OP1 U A 6 26.230 2.803 49.645 1.00 77.67 O
ATOM 27 OP2 U A 6 24.744 3.763 47.758 1.00 81.11 O
ATOM 28 O5' U A 6 25.858 5.244 49.500 1.00 84.00 O
TER

ATOM 1 O3' C B 7 27.400 11.181 47.002 1.00 81.18 O
ATOM 2 P C B 8 26.240 10.395 46.226 1.00 79.97 P
ATOM 3 OP1 C B 8 26.478 8.975 46.561 1.00 81.29 O
ATOM 4 OP2 C B 8 26.359 10.860 44.812 1.00 76.76 O
ATOM 5 O5' C B 8 24.879 10.945 46.867 1.00 80.89 O
ATOM 6 C5' C B 8 24.080 11.943 46.202 1.00 80.93 C
ATOM 7 C4' C B 8 22.639 11.883 46.654 1.00 84.50 C
ATOM 8 O4' C B 8 22.166 10.524 46.522 1.00 85.36 O
ATOM 9 C3' C B 8 22.537 12.223 48.140 1.00 86.94 C
ATOM 10 O3' C B 8 21.342 12.948 48.429 1.00 87.34 O
ATOM 11 C2' C B 8 22.501 10.888 48.863 1.00 86.80 C
ATOM 12 O2' C B 8 21.582 10.937 49.919 1.00 88.97 O
ATOM 13 C1' C B 8 21.879 10.012 47.792 1.00 89.27 C
ATOM 14 N1 C B 8 22.061 8.572 47.843 1.00 92.81 N
ATOM 15 C2 C B 8 20.957 7.802 48.230 1.00 94.52 C
ATOM 16 O2 C B 8 19.861 8.370 48.401 1.00 93.64 O
ATOM 17 N3 C B 8 21.102 6.472 48.396 1.00 95.44 N
ATOM 18 C4 C B 8 22.287 5.901 48.162 1.00 95.91 C
ATOM 19 N4 C B 8 22.393 4.584 48.380 1.00 97.45 N
ATOM 20 C5 C B 8 23.420 6.658 47.705 1.00 95.88 C
ATOM 21 C6 C B 8 23.258 7.981 47.562 1.00 94.06 C
ATOM 22 P A B 9 21.349 14.525 48.657 1.00 86.59 P
ATOM 23 OP1 A B 9 20.314 14.760 49.691 1.00 85.57 O
ATOM 24 OP2 A B 9 21.231 15.174 47.336 1.00 81.37 O
ATOM 25 O5' A B 9 22.740 14.796 49.355 1.00 84.37 O
TER

Atoms:
OP1: (26.445,4.543,41.450)
OP2: (28.322,6.258,41.569)
C3': (27.140,4.609,46.461)
C1': (29.289,5.552,46.308)
C5': (27.651,3.588,44.203)
O6: (34.027,8.936,44.945)
O4': (29.377,4.279,45.739)
C8: (30.230,6.998,44.443)
C2: (33.124,6.936,47.738)
C6: (33.349,8.162,45.627)
C5: (32.081,7.596,45.318)
C4: (31.473,6.796,46.252)
P: (27.773,4.950,41.955)
C4': (28.058,3.704,45.653)
C2': (27.823,5.973,46.427)
O2': (27.705,6.703,47.620)
N1: (33.805,7.758,46.883)
N2: (33.731,6.643,48.896)
N3: (31.931,6.430,47.475)
N7: (31.291,7.709,44.176)
N9: (30.277,6.416,45.684)
O5': (27.786,4.849,43.547)
O3': (27.205,4.017,47.757)
C2: (20.957,7.802,48.230)
OP1: (26.478,8.975,46.561)
OP2: (26.359,10.860,44.812)
C4: (22.287,5.901,48.162)
O5': (24.879,10.945,46.867)
C3': (22.537,12.223,48.140)
C1': (21.879,10.012,47.792)
O4': (22.166,10.524,46.522)
C5': (24.080,11.943,46.202)
P: (26.240,10.395,46.226)
O2: (19.861,8.370,48.401)
C4': (22.639,11.883,46.654)
C2': (22.501,10.888,48.863)
O2': (21.582,10.937,49.919)
N1: (22.061,8.572,47.843)
N3: (21.102,6.472,48.396)
N4: (22.393,4.584,48.380)
C6: (23.258,7.981,47.562)
C5: (23.420,6.658,47.705)
O3': (21.342,12.948,48.429)
Image (generated by PyMOL):
PyMOL image
show in jmol