Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:0423:0178
Extra
PDB:
ATOM 1 O3' U A 422 66.788 115.840 15.894 1.00 45.37 O
ATOM 2 P A A 423 65.848 115.679 17.180 1.00 49.51 P
ATOM 3 OP1 A A 423 66.183 116.806 18.093 1.00 49.69 O
ATOM 4 OP2 A A 423 65.957 114.274 17.668 1.00 46.68 O
ATOM 5 O5' A A 423 64.369 115.894 16.627 1.00 48.50 O
ATOM 6 C5' A A 423 63.986 117.109 15.957 1.00 49.26 C
ATOM 7 C4' A A 423 62.710 116.884 15.183 1.00 50.10 C
ATOM 8 O4' A A 423 62.920 115.812 14.232 1.00 49.73 O
ATOM 9 C3' A A 423 61.530 116.438 16.029 1.00 51.39 C
ATOM 10 O3' A A 423 60.824 117.583 16.490 1.00 54.66 O
ATOM 11 C2' A A 423 60.698 115.618 15.052 1.00 50.43 C
ATOM 12 O2' A A 423 59.907 116.440 14.220 1.00 51.71 O
ATOM 13 C1' A A 423 61.788 114.964 14.201 1.00 48.89 C
ATOM 14 N9 A A 423 62.227 113.632 14.619 1.00 47.92 N
ATOM 15 C8 A A 423 63.442 113.304 15.178 1.00 47.61 C
ATOM 16 N7 A A 423 63.600 112.020 15.382 1.00 47.50 N
ATOM 17 C5 A A 423 62.407 111.464 14.942 1.00 45.79 C
ATOM 18 C6 A A 423 61.961 110.141 14.869 1.00 43.81 C
ATOM 19 N6 A A 423 62.697 109.095 15.229 1.00 43.39 N
ATOM 20 N1 A A 423 60.722 109.924 14.397 1.00 43.73 N
ATOM 21 C2 A A 423 59.992 110.973 14.010 1.00 45.72 C
ATOM 22 N3 A A 423 60.305 112.265 14.012 1.00 46.34 N
ATOM 23 C4 A A 423 61.542 112.447 14.495 1.00 46.44 C
ATOM 24 P A A 424 59.980 117.512 17.852 1.00 56.59 P
ATOM 25 OP1 A A 424 59.123 118.731 17.876 1.00 57.32 O
ATOM 26 OP2 A A 424 60.911 117.246 18.984 1.00 56.69 O
ATOM 27 O5' A A 424 59.057 116.233 17.643 1.00 54.65 O
TER
ATOM 1 O3' A B 177 71.721 107.982 24.672 1.00 43.75 O
ATOM 2 P G B 178 72.784 107.683 23.516 1.00 46.85 P
ATOM 3 OP1 G B 178 73.566 106.479 23.923 1.00 45.02 O
ATOM 4 OP2 G B 178 73.496 108.952 23.215 1.00 47.93 O
ATOM 5 O5' G B 178 71.871 107.313 22.263 1.00 46.24 O
ATOM 6 C5' G B 178 71.093 106.102 22.248 1.00 46.31 C
ATOM 7 C4' G B 178 70.198 106.069 21.030 1.00 46.72 C
ATOM 8 O4' G B 178 69.186 107.097 21.131 1.00 47.74 O
ATOM 9 C3' G B 178 70.885 106.328 19.704 1.00 46.62 C
ATOM 10 O3' G B 178 71.436 105.109 19.221 1.00 48.83 O
ATOM 11 C2' G B 178 69.738 106.830 18.841 1.00 46.35 C
ATOM 12 O2' G B 178 68.918 105.774 18.402 1.00 47.60 O
ATOM 13 C1' G B 178 68.923 107.635 19.853 1.00 45.83 C
ATOM 14 N9 G B 178 69.222 109.058 19.902 1.00 44.99 N
ATOM 15 C8 G B 178 70.248 109.665 20.584 1.00 45.64 C
ATOM 16 N7 G B 178 70.233 110.963 20.480 1.00 45.90 N
ATOM 17 C5 G B 178 69.139 111.226 19.670 1.00 47.18 C
ATOM 18 C6 G B 178 68.618 112.460 19.204 1.00 49.19 C
ATOM 19 O6 G B 178 69.035 113.605 19.426 1.00 51.18 O
ATOM 20 N1 G B 178 67.493 112.271 18.403 1.00 48.87 N
ATOM 21 C2 G B 178 66.944 111.053 18.091 1.00 47.85 C
ATOM 22 N2 G B 178 65.855 111.077 17.300 1.00 46.97 N
ATOM 23 N3 G B 178 67.424 109.895 18.522 1.00 46.02 N
ATOM 24 C4 G B 178 68.512 110.057 19.300 1.00 45.18 C
ATOM 25 P A B 179 72.784 105.126 18.354 1.00 50.53 P
ATOM 26 OP1 A B 179 73.226 103.718 18.206 1.00 50.59 O
ATOM 27 OP2 A B 179 73.717 106.123 18.944 1.00 50.31 O
ATOM 28 O5' A B 179 72.272 105.643 16.937 1.00 51.08 O
TER
ATOM 2 P A A 423 65.848 115.679 17.180 1.00 49.51 P
ATOM 3 OP1 A A 423 66.183 116.806 18.093 1.00 49.69 O
ATOM 4 OP2 A A 423 65.957 114.274 17.668 1.00 46.68 O
ATOM 5 O5' A A 423 64.369 115.894 16.627 1.00 48.50 O
ATOM 6 C5' A A 423 63.986 117.109 15.957 1.00 49.26 C
ATOM 7 C4' A A 423 62.710 116.884 15.183 1.00 50.10 C
ATOM 8 O4' A A 423 62.920 115.812 14.232 1.00 49.73 O
ATOM 9 C3' A A 423 61.530 116.438 16.029 1.00 51.39 C
ATOM 10 O3' A A 423 60.824 117.583 16.490 1.00 54.66 O
ATOM 11 C2' A A 423 60.698 115.618 15.052 1.00 50.43 C
ATOM 12 O2' A A 423 59.907 116.440 14.220 1.00 51.71 O
ATOM 13 C1' A A 423 61.788 114.964 14.201 1.00 48.89 C
ATOM 14 N9 A A 423 62.227 113.632 14.619 1.00 47.92 N
ATOM 15 C8 A A 423 63.442 113.304 15.178 1.00 47.61 C
ATOM 16 N7 A A 423 63.600 112.020 15.382 1.00 47.50 N
ATOM 17 C5 A A 423 62.407 111.464 14.942 1.00 45.79 C
ATOM 18 C6 A A 423 61.961 110.141 14.869 1.00 43.81 C
ATOM 19 N6 A A 423 62.697 109.095 15.229 1.00 43.39 N
ATOM 20 N1 A A 423 60.722 109.924 14.397 1.00 43.73 N
ATOM 21 C2 A A 423 59.992 110.973 14.010 1.00 45.72 C
ATOM 22 N3 A A 423 60.305 112.265 14.012 1.00 46.34 N
ATOM 23 C4 A A 423 61.542 112.447 14.495 1.00 46.44 C
ATOM 24 P A A 424 59.980 117.512 17.852 1.00 56.59 P
ATOM 25 OP1 A A 424 59.123 118.731 17.876 1.00 57.32 O
ATOM 26 OP2 A A 424 60.911 117.246 18.984 1.00 56.69 O
ATOM 27 O5' A A 424 59.057 116.233 17.643 1.00 54.65 O
TER
ATOM 1 O3' A B 177 71.721 107.982 24.672 1.00 43.75 O
ATOM 2 P G B 178 72.784 107.683 23.516 1.00 46.85 P
ATOM 3 OP1 G B 178 73.566 106.479 23.923 1.00 45.02 O
ATOM 4 OP2 G B 178 73.496 108.952 23.215 1.00 47.93 O
ATOM 5 O5' G B 178 71.871 107.313 22.263 1.00 46.24 O
ATOM 6 C5' G B 178 71.093 106.102 22.248 1.00 46.31 C
ATOM 7 C4' G B 178 70.198 106.069 21.030 1.00 46.72 C
ATOM 8 O4' G B 178 69.186 107.097 21.131 1.00 47.74 O
ATOM 9 C3' G B 178 70.885 106.328 19.704 1.00 46.62 C
ATOM 10 O3' G B 178 71.436 105.109 19.221 1.00 48.83 O
ATOM 11 C2' G B 178 69.738 106.830 18.841 1.00 46.35 C
ATOM 12 O2' G B 178 68.918 105.774 18.402 1.00 47.60 O
ATOM 13 C1' G B 178 68.923 107.635 19.853 1.00 45.83 C
ATOM 14 N9 G B 178 69.222 109.058 19.902 1.00 44.99 N
ATOM 15 C8 G B 178 70.248 109.665 20.584 1.00 45.64 C
ATOM 16 N7 G B 178 70.233 110.963 20.480 1.00 45.90 N
ATOM 17 C5 G B 178 69.139 111.226 19.670 1.00 47.18 C
ATOM 18 C6 G B 178 68.618 112.460 19.204 1.00 49.19 C
ATOM 19 O6 G B 178 69.035 113.605 19.426 1.00 51.18 O
ATOM 20 N1 G B 178 67.493 112.271 18.403 1.00 48.87 N
ATOM 21 C2 G B 178 66.944 111.053 18.091 1.00 47.85 C
ATOM 22 N2 G B 178 65.855 111.077 17.300 1.00 46.97 N
ATOM 23 N3 G B 178 67.424 109.895 18.522 1.00 46.02 N
ATOM 24 C4 G B 178 68.512 110.057 19.300 1.00 45.18 C
ATOM 25 P A B 179 72.784 105.126 18.354 1.00 50.53 P
ATOM 26 OP1 A B 179 73.226 103.718 18.206 1.00 50.59 O
ATOM 27 OP2 A B 179 73.717 106.123 18.944 1.00 50.31 O
ATOM 28 O5' A B 179 72.272 105.643 16.937 1.00 51.08 O
TER
Atoms:
OP1: (66.183,116.806,18.093)
OP2: (65.957,114.274,17.668)
C3': (61.530,116.438,16.029)
C1': (61.788,114.964,14.201)
C5': (63.986,117.109,15.957)
O4': (62.920,115.812,14.232)
C8: (63.442,113.304,15.178)
O2': (59.907,116.440,14.220)
C6: (61.961,110.141,14.869)
C5: (62.407,111.464,14.942)
C4: (61.542,112.447,14.495)
P: (65.848,115.679,17.180)
C4': (62.710,116.884,15.183)
C2': (60.698,115.618,15.052)
C2: (59.992,110.973,14.010)
N1: (60.722,109.924,14.397)
N3: (60.305,112.265,14.012)
N6: (62.697,109.095,15.229)
N7: (63.600,112.020,15.382)
N9: (62.227,113.632,14.619)
O5': (64.369,115.894,16.627)
O3': (60.824,117.583,16.490)
OP2: (65.957,114.274,17.668)
C3': (61.530,116.438,16.029)
C1': (61.788,114.964,14.201)
C5': (63.986,117.109,15.957)
O4': (62.920,115.812,14.232)
C8: (63.442,113.304,15.178)
O2': (59.907,116.440,14.220)
C6: (61.961,110.141,14.869)
C5: (62.407,111.464,14.942)
C4: (61.542,112.447,14.495)
P: (65.848,115.679,17.180)
C4': (62.710,116.884,15.183)
C2': (60.698,115.618,15.052)
C2: (59.992,110.973,14.010)
N1: (60.722,109.924,14.397)
N3: (60.305,112.265,14.012)
N6: (62.697,109.095,15.229)
N7: (63.600,112.020,15.382)
N9: (62.227,113.632,14.619)
O5': (64.369,115.894,16.627)
O3': (60.824,117.583,16.490)
OP1: (73.566,106.479,23.923)
OP2: (73.496,108.952,23.215)
C3': (70.885,106.328,19.704)
C1': (68.923,107.635,19.853)
C5': (71.093,106.102,22.248)
O6: (69.035,113.605,19.426)
O4': (69.186,107.097,21.131)
C8: (70.248,109.665,20.584)
C2: (66.944,111.053,18.091)
C6: (68.618,112.460,19.204)
C5: (69.139,111.226,19.670)
C4: (68.512,110.057,19.300)
P: (72.784,107.683,23.516)
C4': (70.198,106.069,21.030)
C2': (69.738,106.830,18.841)
O2': (68.918,105.774,18.402)
N1: (67.493,112.271,18.403)
N2: (65.855,111.077,17.300)
N3: (67.424,109.895,18.522)
N7: (70.233,110.963,20.480)
N9: (69.222,109.058,19.902)
O5': (71.871,107.313,22.263)
O3': (71.436,105.109,19.221)
OP2: (73.496,108.952,23.215)
C3': (70.885,106.328,19.704)
C1': (68.923,107.635,19.853)
C5': (71.093,106.102,22.248)
O6: (69.035,113.605,19.426)
O4': (69.186,107.097,21.131)
C8: (70.248,109.665,20.584)
C2: (66.944,111.053,18.091)
C6: (68.618,112.460,19.204)
C5: (69.139,111.226,19.670)
C4: (68.512,110.057,19.300)
P: (72.784,107.683,23.516)
C4': (70.198,106.069,21.030)
C2': (69.738,106.830,18.841)
O2': (68.918,105.774,18.402)
N1: (67.493,112.271,18.403)
N2: (65.855,111.077,17.300)
N3: (67.424,109.895,18.522)
N7: (70.233,110.963,20.480)
N9: (69.222,109.058,19.902)
O5': (71.871,107.313,22.263)
O3': (71.436,105.109,19.221)
Image (generated by PyMOL):