ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YJW:0293:0333

Extra

PDB:
ATOM 1 O3' G A 292 18.037 137.493 18.564 1.00 59.55 O
ATOM 2 P A A 293 17.149 138.476 19.471 1.00 60.06 P
ATOM 3 OP1 A A 293 16.880 139.685 18.657 1.00 60.36 O
ATOM 4 OP2 A A 293 17.776 138.623 20.810 1.00 60.26 O
ATOM 5 O5' A A 293 15.785 137.675 19.640 1.00 57.69 O
ATOM 6 C5' A A 293 15.186 137.003 18.518 1.00 57.04 C
ATOM 7 C4' A A 293 14.289 135.892 18.996 1.00 56.71 C
ATOM 8 O4' A A 293 15.086 134.848 19.603 1.00 57.06 O
ATOM 9 C3' A A 293 13.295 136.302 20.067 1.00 56.31 C
ATOM 10 O3' A A 293 12.133 136.859 19.465 1.00 53.83 O
ATOM 11 C2' A A 293 13.017 134.991 20.797 1.00 57.33 C
ATOM 12 O2' A A 293 12.035 134.197 20.166 1.00 58.19 O
ATOM 13 C1' A A 293 14.377 134.290 20.698 1.00 58.22 C
ATOM 14 N9 A A 293 15.225 134.381 21.887 1.00 58.38 N
ATOM 15 C8 A A 293 15.957 135.454 22.331 1.00 58.25 C
ATOM 16 N7 A A 293 16.647 135.211 23.416 1.00 57.68 N
ATOM 17 C5 A A 293 16.343 133.892 23.714 1.00 58.30 C
ATOM 18 C6 A A 293 16.759 133.040 24.745 1.00 58.08 C
ATOM 19 N6 A A 293 17.605 133.406 25.709 1.00 57.84 N
ATOM 20 N1 A A 293 16.273 131.780 24.752 1.00 57.77 N
ATOM 21 C2 A A 293 15.425 131.415 23.785 1.00 57.58 C
ATOM 22 N3 A A 293 14.959 132.125 22.763 1.00 57.57 N
ATOM 23 C4 A A 293 15.464 133.370 22.785 1.00 58.17 C
ATOM 24 P A A 294 11.480 138.189 20.076 1.00 53.65 P
ATOM 25 OP1 A A 294 10.443 138.663 19.126 1.00 54.74 O
ATOM 26 OP2 A A 294 12.570 139.114 20.496 1.00 53.60 O
ATOM 27 O5' A A 294 10.722 137.660 21.363 1.00 51.67 O
TER

ATOM 1 O3' C B 332 26.017 141.772 26.868 1.00 42.40 O
ATOM 2 P G B 333 26.276 140.736 25.672 1.00 44.83 P
ATOM 3 OP1 G B 333 27.734 140.723 25.399 1.00 45.38 O
ATOM 4 OP2 G B 333 25.323 141.042 24.580 1.00 47.61 O
ATOM 5 O5' G B 333 25.856 139.339 26.297 1.00 44.21 O
ATOM 6 C5' G B 333 26.463 138.105 25.887 1.00 44.04 C
ATOM 7 C4' G B 333 26.613 137.199 27.087 1.00 44.38 C
ATOM 8 O4' G B 333 25.689 137.590 28.139 1.00 45.65 O
ATOM 9 C3' G B 333 26.405 135.712 26.855 1.00 42.40 C
ATOM 10 O3' G B 333 27.649 135.087 26.564 1.00 41.96 O
ATOM 11 C2' G B 333 25.827 135.255 28.189 1.00 44.31 C
ATOM 12 O2' G B 333 26.841 135.120 29.170 1.00 43.52 O
ATOM 13 C1' G B 333 24.965 136.463 28.574 1.00 45.01 C
ATOM 14 N9 G B 333 23.624 136.561 27.994 1.00 46.65 N
ATOM 15 C8 G B 333 23.131 137.620 27.265 1.00 47.41 C
ATOM 16 N7 G B 333 21.889 137.463 26.903 1.00 47.81 N
ATOM 17 C5 G B 333 21.537 136.223 27.416 1.00 49.04 C
ATOM 18 C6 G B 333 20.312 135.525 27.348 1.00 49.40 C
ATOM 19 O6 G B 333 19.260 135.875 26.802 1.00 51.26 O
ATOM 20 N1 G B 333 20.383 134.303 28.006 1.00 48.47 N
ATOM 21 C2 G B 333 21.494 133.814 28.643 1.00 47.91 C
ATOM 22 N2 G B 333 21.365 132.615 29.218 1.00 48.21 N
ATOM 23 N3 G B 333 22.646 134.455 28.713 1.00 48.46 N
ATOM 24 C4 G B 333 22.598 135.647 28.085 1.00 48.25 C
ATOM 25 P U B 334 27.721 133.893 25.493 1.00 43.53 P
ATOM 26 OP1 U B 334 29.048 133.245 25.620 1.00 44.30 O
ATOM 27 OP2 U B 334 27.296 134.411 24.172 1.00 43.86 O
ATOM 28 O5' U B 334 26.612 132.865 25.995 1.00 45.50 O
TER

Atoms:
OP1: (16.880,139.685,18.657)
OP2: (17.776,138.623,20.810)
C3': (13.295,136.302,20.067)
C1': (14.377,134.290,20.698)
C5': (15.186,137.003,18.518)
O4': (15.086,134.848,19.603)
C8: (15.957,135.454,22.331)
O2': (12.035,134.197,20.166)
C6: (16.759,133.040,24.745)
C5: (16.343,133.892,23.714)
C4: (15.464,133.370,22.785)
P: (17.149,138.476,19.471)
C4': (14.289,135.892,18.996)
C2': (13.017,134.991,20.797)
C2: (15.425,131.415,23.785)
N1: (16.273,131.780,24.752)
N3: (14.959,132.125,22.763)
N6: (17.605,133.406,25.709)
N7: (16.647,135.211,23.416)
N9: (15.225,134.381,21.887)
O5': (15.785,137.675,19.640)
O3': (12.133,136.859,19.465)
OP1: (27.734,140.723,25.399)
OP2: (25.323,141.042,24.580)
C3': (26.405,135.712,26.855)
C1': (24.965,136.463,28.574)
C5': (26.463,138.105,25.887)
O6: (19.260,135.875,26.802)
O4': (25.689,137.590,28.139)
C8: (23.131,137.620,27.265)
C2: (21.494,133.814,28.643)
C6: (20.312,135.525,27.348)
C5: (21.537,136.223,27.416)
C4: (22.598,135.647,28.085)
P: (26.276,140.736,25.672)
C4': (26.613,137.199,27.087)
C2': (25.827,135.255,28.189)
O2': (26.841,135.120,29.170)
N1: (20.383,134.303,28.006)
N2: (21.365,132.615,29.218)
N3: (22.646,134.455,28.713)
N7: (21.889,137.463,26.903)
N9: (23.624,136.561,27.994)
O5': (25.856,139.339,26.297)
O3': (27.649,135.087,26.564)
Image (generated by PyMOL):
PyMOL image
show in jmol