ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1KD1:A88:A68

Extra

PDB:
ATOM 1 O3' G A 87 37.556 159.585 18.045 1.00 63.68 O
ATOM 2 P A A 88 38.887 158.741 18.343 1.00 60.04 P
ATOM 3 OP1 A A 88 39.933 159.139 17.373 1.00 60.72 O
ATOM 4 OP2 A A 88 38.492 157.325 18.450 1.00 60.58 O
ATOM 5 O5' A A 88 39.309 159.230 19.793 1.00 60.47 O
ATOM 6 C5' A A 88 40.038 160.450 19.977 1.00 59.61 C
ATOM 7 C4' A A 88 39.771 161.015 21.356 1.00 59.71 C
ATOM 8 O4' A A 88 38.404 161.506 21.463 1.00 60.55 O
ATOM 9 C3' A A 88 39.881 160.030 22.501 1.00 58.83 C
ATOM 10 O3' A A 88 41.218 159.838 22.871 1.00 57.41 O
ATOM 11 C2' A A 88 39.103 160.736 23.591 1.00 58.96 C
ATOM 12 O2' A A 88 39.872 161.791 24.138 1.00 59.14 O
ATOM 13 C1' A A 88 37.926 161.285 22.783 1.00 59.79 C
ATOM 14 N9 A A 88 36.868 160.283 22.702 1.00 60.49 N
ATOM 15 C8 A A 88 36.574 159.464 21.630 1.00 60.33 C
ATOM 16 N7 A A 88 35.583 158.636 21.852 1.00 61.04 N
ATOM 17 C5 A A 88 35.190 158.929 23.155 1.00 62.12 C
ATOM 18 C6 A A 88 34.184 158.396 23.981 1.00 62.07 C
ATOM 19 N6 A A 88 33.368 157.413 23.606 1.00 62.21 N
ATOM 20 N1 A A 88 34.049 158.912 25.223 1.00 61.99 N
ATOM 21 C2 A A 88 34.873 159.892 25.608 1.00 61.98 C
ATOM 22 N3 A A 88 35.858 160.481 24.929 1.00 62.17 N
ATOM 23 C4 A A 88 35.969 159.947 23.690 1.00 62.10 C
ATOM 24 P A A 89 41.709 158.371 23.266 1.00 58.69 P
ATOM 25 OP1 A A 89 43.129 158.523 23.671 1.00 58.03 O
ATOM 26 OP2 A A 89 41.358 157.450 22.156 1.00 57.97 O
ATOM 27 O5' A A 89 40.792 157.962 24.516 1.00 59.47 O
TER

ATOM 1 O3' G B 67 34.569 146.905 15.705 1.00 70.29 O
ATOM 2 P G B 68 33.213 147.717 16.027 1.00 69.83 P
ATOM 3 OP1 G B 68 32.074 146.775 16.227 1.00 70.88 O
ATOM 4 OP2 G B 68 33.120 148.753 14.979 1.00 69.31 O
ATOM 5 O5' G B 68 33.515 148.480 17.396 1.00 67.82 O
ATOM 6 C5' G B 68 33.446 147.825 18.683 1.00 63.38 C
ATOM 7 C4' G B 68 33.536 148.862 19.786 1.00 62.39 C
ATOM 8 O4' G B 68 34.813 149.553 19.686 1.00 62.68 O
ATOM 9 C3' G B 68 32.503 149.972 19.697 1.00 60.64 C
ATOM 10 O3' G B 68 31.270 149.598 20.286 1.00 58.14 O
ATOM 11 C2' G B 68 33.177 151.145 20.396 1.00 61.19 C
ATOM 12 O2' G B 68 33.005 151.135 21.795 1.00 60.13 O
ATOM 13 C1' G B 68 34.649 150.929 20.019 1.00 62.79 C
ATOM 14 N9 G B 68 35.129 151.746 18.900 1.00 64.06 N
ATOM 15 C8 G B 68 35.152 151.379 17.578 1.00 64.05 C
ATOM 16 N7 G B 68 35.627 152.306 16.793 1.00 64.23 N
ATOM 17 C5 G B 68 35.938 153.359 17.645 1.00 64.62 C
ATOM 18 C6 G B 68 36.481 154.651 17.366 1.00 66.01 C
ATOM 19 O6 G B 68 36.782 155.159 16.266 1.00 67.55 O
ATOM 20 N1 G B 68 36.654 155.387 18.529 1.00 65.84 N
ATOM 21 C2 G B 68 36.345 154.961 19.791 1.00 65.09 C
ATOM 22 N2 G B 68 36.614 155.827 20.786 1.00 65.56 N
ATOM 23 N3 G B 68 35.822 153.780 20.064 1.00 64.99 N
ATOM 24 C4 G B 68 35.647 153.032 18.952 1.00 64.23 C
ATOM 25 P G B 69 29.905 150.085 19.606 1.00 56.43 P
ATOM 26 OP1 G B 69 28.756 149.326 20.171 1.00 55.30 O
ATOM 27 OP2 G B 69 30.143 150.081 18.133 1.00 56.02 O
ATOM 28 O5' G B 69 29.769 151.579 20.135 1.00 55.91 O
TER

Atoms:
OP1: (39.933,159.139,17.373)
OP2: (38.492,157.325,18.450)
C3': (39.881,160.030,22.501)
C1': (37.926,161.285,22.783)
C5': (40.038,160.450,19.977)
O4': (38.404,161.506,21.463)
C8: (36.574,159.464,21.630)
O2': (39.872,161.791,24.138)
C6: (34.184,158.396,23.981)
C5: (35.190,158.929,23.155)
C4: (35.969,159.947,23.690)
P: (38.887,158.741,18.343)
C4': (39.771,161.015,21.356)
C2': (39.103,160.736,23.591)
C2: (34.873,159.892,25.608)
N1: (34.049,158.912,25.223)
N3: (35.858,160.481,24.929)
N6: (33.368,157.413,23.606)
N7: (35.583,158.636,21.852)
N9: (36.868,160.283,22.702)
O5': (39.309,159.230,19.793)
O3': (41.218,159.838,22.871)
OP1: (32.074,146.775,16.227)
OP2: (33.120,148.753,14.979)
C3': (32.503,149.972,19.697)
C1': (34.649,150.929,20.019)
C5': (33.446,147.825,18.683)
O6: (36.782,155.159,16.266)
O4': (34.813,149.553,19.686)
C8: (35.152,151.379,17.578)
C2: (36.345,154.961,19.791)
C6: (36.481,154.651,17.366)
C5: (35.938,153.359,17.645)
C4: (35.647,153.032,18.952)
P: (33.213,147.717,16.027)
C4': (33.536,148.862,19.786)
C2': (33.177,151.145,20.396)
O2': (33.005,151.135,21.795)
N1: (36.654,155.387,18.529)
N2: (36.614,155.827,20.786)
N3: (35.822,153.780,20.064)
N7: (35.627,152.306,16.793)
N9: (35.129,151.746,18.900)
O5': (33.515,148.480,17.396)
O3': (31.270,149.598,20.286)
Image (generated by PyMOL):
PyMOL image
show in jmol