ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQM:0568:0565

Extra

PDB:
ATOM 1 O3' G A 567 6.510 92.932 135.232 1.00 57.91 O
ATOM 2 P A A 568 5.455 93.288 134.072 1.00 59.76 P
ATOM 3 OP1 A A 568 4.651 94.433 134.564 1.00 56.75 O
ATOM 4 OP2 A A 568 4.773 92.047 133.615 1.00 56.35 O
ATOM 5 O5' A A 568 6.354 93.828 132.872 1.00 60.24 O
ATOM 6 C5' A A 568 7.056 95.087 132.979 1.00 59.09 C
ATOM 7 C4' A A 568 8.169 95.145 131.962 1.00 57.71 C
ATOM 8 O4' A A 568 9.085 94.049 132.210 1.00 56.58 O
ATOM 9 C3' A A 568 7.732 94.941 130.523 1.00 58.87 C
ATOM 10 O3' A A 568 7.258 96.160 129.940 1.00 60.53 O
ATOM 11 C2' A A 568 9.005 94.429 129.862 1.00 58.25 C
ATOM 12 O2' A A 568 9.903 95.468 129.524 1.00 60.31 O
ATOM 13 C1' A A 568 9.607 93.578 130.985 1.00 56.50 C
ATOM 14 N9 A A 568 9.319 92.150 130.879 1.00 55.04 N
ATOM 15 C8 A A 568 8.108 91.515 131.004 1.00 54.86 C
ATOM 16 N7 A A 568 8.171 90.219 130.817 1.00 54.34 N
ATOM 17 C5 A A 568 9.513 89.981 130.559 1.00 52.11 C
ATOM 18 C6 A A 568 10.227 88.805 130.268 1.00 51.59 C
ATOM 19 N6 A A 568 9.666 87.599 130.178 1.00 52.07 N
ATOM 20 N1 A A 568 11.558 88.913 130.065 1.00 52.37 N
ATOM 21 C2 A A 568 12.125 90.125 130.152 1.00 52.63 C
ATOM 22 N3 A A 568 11.559 91.303 130.417 1.00 53.33 N
ATOM 23 C4 A A 568 10.235 91.161 130.608 1.00 53.81 C
ATOM 24 P G A 569 5.986 96.131 128.959 1.00 60.17 P
ATOM 25 OP1 G A 569 6.329 96.897 127.725 1.00 65.13 O
ATOM 26 OP2 G A 569 4.794 96.512 129.739 1.00 61.13 O
ATOM 27 O5' G A 569 5.872 94.591 128.586 1.00 58.79 O
TER

ATOM 1 O3' C B 564 1.959 79.873 133.485 1.00 76.41 O
ATOM 2 P G B 565 2.591 80.352 134.879 1.00 77.35 P
ATOM 3 OP1 G B 565 3.314 79.182 135.450 1.00 78.55 O
ATOM 4 OP2 G B 565 1.536 81.030 135.676 1.00 76.78 O
ATOM 5 O5' G B 565 3.654 81.461 134.451 1.00 77.34 O
ATOM 6 C5' G B 565 4.763 81.125 133.593 1.00 75.05 C
ATOM 7 C4' G B 565 5.597 82.350 133.296 1.00 73.29 C
ATOM 8 O4' G B 565 4.851 83.279 132.464 1.00 72.08 O
ATOM 9 C3' G B 565 5.992 83.197 134.491 1.00 73.05 C
ATOM 10 O3' G B 565 7.073 82.638 135.222 1.00 72.69 O
ATOM 11 C2' G B 565 6.354 84.519 133.828 1.00 72.82 C
ATOM 12 O2' G B 565 7.641 84.513 133.243 1.00 72.95 O
ATOM 13 C1' G B 565 5.284 84.603 132.736 1.00 71.81 C
ATOM 14 N9 G B 565 4.142 85.402 133.166 1.00 70.35 N
ATOM 15 C8 G B 565 2.948 84.958 133.681 1.00 70.51 C
ATOM 16 N7 G B 565 2.143 85.930 134.015 1.00 70.60 N
ATOM 17 C5 G B 565 2.844 87.083 133.691 1.00 70.01 C
ATOM 18 C6 G B 565 2.487 88.450 133.832 1.00 69.87 C
ATOM 19 O6 G B 565 1.444 88.933 134.289 1.00 69.92 O
ATOM 20 N1 G B 565 3.497 89.291 133.374 1.00 70.45 N
ATOM 21 C2 G B 565 4.696 88.873 132.848 1.00 70.71 C
ATOM 22 N2 G B 565 5.541 89.832 132.455 1.00 71.45 N
ATOM 23 N3 G B 565 5.040 87.606 132.715 1.00 70.67 N
ATOM 24 C4 G B 565 4.074 86.772 133.155 1.00 70.31 C
ATOM 25 P C B 566 6.988 82.567 136.823 1.00 71.18 P
ATOM 26 OP1 C B 566 8.270 82.017 137.325 1.00 72.55 O
ATOM 27 OP2 C B 566 5.714 81.879 137.155 1.00 74.08 O
ATOM 28 O5' C B 566 6.865 84.088 137.275 1.00 70.11 O
TER

Atoms:
OP1: (4.651,94.433,134.564)
OP2: (4.773,92.047,133.615)
C3': (7.732,94.941,130.523)
C1': (9.607,93.578,130.985)
C5': (7.056,95.087,132.979)
O4': (9.085,94.049,132.210)
C8: (8.108,91.515,131.004)
O2': (9.903,95.468,129.524)
C6: (10.227,88.805,130.268)
C5: (9.513,89.981,130.559)
C4: (10.235,91.161,130.608)
P: (5.455,93.288,134.072)
C4': (8.169,95.145,131.962)
C2': (9.005,94.429,129.862)
C2: (12.125,90.125,130.152)
N1: (11.558,88.913,130.065)
N3: (11.559,91.303,130.417)
N6: (9.666,87.599,130.178)
N7: (8.171,90.219,130.817)
N9: (9.319,92.150,130.879)
O5': (6.354,93.828,132.872)
O3': (7.258,96.160,129.940)
OP1: (3.314,79.182,135.450)
OP2: (1.536,81.030,135.676)
C3': (5.992,83.197,134.491)
C1': (5.284,84.603,132.736)
C5': (4.763,81.125,133.593)
O6: (1.444,88.933,134.289)
O4': (4.851,83.279,132.464)
C8: (2.948,84.958,133.681)
C2: (4.696,88.873,132.848)
C6: (2.487,88.450,133.832)
C5: (2.844,87.083,133.691)
C4: (4.074,86.772,133.155)
P: (2.591,80.352,134.879)
C4': (5.597,82.350,133.296)
C2': (6.354,84.519,133.828)
O2': (7.641,84.513,133.243)
N1: (3.497,89.291,133.374)
N2: (5.541,89.832,132.455)
N3: (5.040,87.606,132.715)
N7: (2.143,85.930,134.015)
N9: (4.142,85.402,133.166)
O5': (3.654,81.461,134.451)
O3': (7.073,82.638,135.222)
Image (generated by PyMOL):
PyMOL image
show in jmol