Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:01941:02426
Extra
PDB:
ATOM 1 O3' A A1940 92.402 129.681 128.938 1.00 39.15 O
ATOM 2 P G A1941 93.615 129.486 127.913 1.00 40.63 P
ATOM 3 OP1 G A1941 93.678 128.028 127.613 1.00 40.87 O
ATOM 4 OP2 G A1941 94.819 130.175 128.440 1.00 43.39 O
ATOM 5 O5' G A1941 93.134 130.265 126.612 1.00 41.81 O
ATOM 6 C5' G A1941 91.930 129.877 125.934 1.00 39.82 C
ATOM 7 C4' G A1941 92.132 129.933 124.447 1.00 36.75 C
ATOM 8 O4' G A1941 92.071 131.314 124.006 1.00 37.04 O
ATOM 9 C3' G A1941 93.458 129.379 123.939 1.00 37.51 C
ATOM 10 O3' G A1941 93.246 128.749 122.688 1.00 36.79 O
ATOM 11 C2' G A1941 94.280 130.646 123.725 1.00 39.33 C
ATOM 12 O2' G A1941 95.299 130.502 122.760 1.00 40.32 O
ATOM 13 C1' G A1941 93.208 131.602 123.219 1.00 40.15 C
ATOM 14 N9 G A1941 93.522 133.022 123.343 1.00 42.74 N
ATOM 15 C8 G A1941 93.841 133.707 124.489 1.00 43.43 C
ATOM 16 N7 G A1941 94.067 134.976 124.280 1.00 45.04 N
ATOM 17 C5 G A1941 93.894 135.140 122.912 1.00 44.46 C
ATOM 18 C6 G A1941 94.027 136.299 122.097 1.00 45.19 C
ATOM 19 O6 G A1941 94.372 137.440 122.424 1.00 44.94 O
ATOM 20 N1 G A1941 93.730 136.026 120.771 1.00 46.43 N
ATOM 21 C2 G A1941 93.380 134.798 120.279 1.00 47.33 C
ATOM 22 N2 G A1941 93.131 134.748 118.963 1.00 48.76 N
ATOM 23 N3 G A1941 93.281 133.702 121.018 1.00 45.75 N
ATOM 24 C4 G A1941 93.547 133.946 122.319 1.00 44.31 C
ATOM 25 P U A1942 93.915 127.326 122.392 1.00 36.86 P
ATOM 26 OP1 U A1942 93.531 126.399 123.487 1.00 36.82 O
ATOM 27 OP2 U A1942 95.343 127.519 122.064 1.00 38.43 O
ATOM 28 O5' U A1942 93.200 126.856 121.052 1.00 39.79 O
TER
ATOM 1 O3' G B2425 84.315 137.762 125.252 1.00 37.10 O
ATOM 2 P G B2426 84.888 137.122 123.903 1.00 38.14 P
ATOM 3 OP1 G B2426 85.432 138.236 123.084 1.00 36.34 O
ATOM 4 OP2 G B2426 83.846 136.233 123.333 1.00 39.32 O
ATOM 5 O5' G B2426 86.076 136.192 124.407 1.00 37.44 O
ATOM 6 C5' G B2426 87.383 136.727 124.670 1.00 35.48 C
ATOM 7 C4' G B2426 88.390 135.609 124.736 1.00 34.40 C
ATOM 8 O4' G B2426 88.128 134.776 125.897 1.00 34.70 O
ATOM 9 C3' G B2426 88.314 134.631 123.582 1.00 34.73 C
ATOM 10 O3' G B2426 88.934 135.130 122.406 1.00 36.16 O
ATOM 11 C2' G B2426 88.979 133.397 124.169 1.00 33.13 C
ATOM 12 O2' G B2426 90.383 133.510 124.240 1.00 30.90 O
ATOM 13 C1' G B2426 88.412 133.418 125.586 1.00 33.70 C
ATOM 14 N9 G B2426 87.173 132.652 125.701 1.00 34.46 N
ATOM 15 C8 G B2426 85.897 133.152 125.768 1.00 35.16 C
ATOM 16 N7 G B2426 84.987 132.222 125.874 1.00 36.01 N
ATOM 17 C5 G B2426 85.704 131.036 125.872 1.00 34.82 C
ATOM 18 C6 G B2426 85.257 129.702 125.964 1.00 35.39 C
ATOM 19 O6 G B2426 84.102 129.287 126.063 1.00 39.30 O
ATOM 20 N1 G B2426 86.314 128.803 125.933 1.00 35.26 N
ATOM 21 C2 G B2426 87.636 129.142 125.823 1.00 34.20 C
ATOM 22 N2 G B2426 88.509 128.121 125.816 1.00 32.76 N
ATOM 23 N3 G B2426 88.070 130.388 125.730 1.00 34.82 N
ATOM 24 C4 G B2426 87.054 131.280 125.764 1.00 34.90 C
ATOM 25 P U B2427 88.352 134.708 120.971 1.00 33.82 P
ATOM 26 OP1 U B2427 89.037 135.527 119.934 1.00 30.70 O
ATOM 27 OP2 U B2427 86.872 134.719 121.062 1.00 32.64 O
ATOM 28 O5' U B2427 88.837 133.203 120.817 1.00 31.94 O
TER
ATOM 2 P G A1941 93.615 129.486 127.913 1.00 40.63 P
ATOM 3 OP1 G A1941 93.678 128.028 127.613 1.00 40.87 O
ATOM 4 OP2 G A1941 94.819 130.175 128.440 1.00 43.39 O
ATOM 5 O5' G A1941 93.134 130.265 126.612 1.00 41.81 O
ATOM 6 C5' G A1941 91.930 129.877 125.934 1.00 39.82 C
ATOM 7 C4' G A1941 92.132 129.933 124.447 1.00 36.75 C
ATOM 8 O4' G A1941 92.071 131.314 124.006 1.00 37.04 O
ATOM 9 C3' G A1941 93.458 129.379 123.939 1.00 37.51 C
ATOM 10 O3' G A1941 93.246 128.749 122.688 1.00 36.79 O
ATOM 11 C2' G A1941 94.280 130.646 123.725 1.00 39.33 C
ATOM 12 O2' G A1941 95.299 130.502 122.760 1.00 40.32 O
ATOM 13 C1' G A1941 93.208 131.602 123.219 1.00 40.15 C
ATOM 14 N9 G A1941 93.522 133.022 123.343 1.00 42.74 N
ATOM 15 C8 G A1941 93.841 133.707 124.489 1.00 43.43 C
ATOM 16 N7 G A1941 94.067 134.976 124.280 1.00 45.04 N
ATOM 17 C5 G A1941 93.894 135.140 122.912 1.00 44.46 C
ATOM 18 C6 G A1941 94.027 136.299 122.097 1.00 45.19 C
ATOM 19 O6 G A1941 94.372 137.440 122.424 1.00 44.94 O
ATOM 20 N1 G A1941 93.730 136.026 120.771 1.00 46.43 N
ATOM 21 C2 G A1941 93.380 134.798 120.279 1.00 47.33 C
ATOM 22 N2 G A1941 93.131 134.748 118.963 1.00 48.76 N
ATOM 23 N3 G A1941 93.281 133.702 121.018 1.00 45.75 N
ATOM 24 C4 G A1941 93.547 133.946 122.319 1.00 44.31 C
ATOM 25 P U A1942 93.915 127.326 122.392 1.00 36.86 P
ATOM 26 OP1 U A1942 93.531 126.399 123.487 1.00 36.82 O
ATOM 27 OP2 U A1942 95.343 127.519 122.064 1.00 38.43 O
ATOM 28 O5' U A1942 93.200 126.856 121.052 1.00 39.79 O
TER
ATOM 1 O3' G B2425 84.315 137.762 125.252 1.00 37.10 O
ATOM 2 P G B2426 84.888 137.122 123.903 1.00 38.14 P
ATOM 3 OP1 G B2426 85.432 138.236 123.084 1.00 36.34 O
ATOM 4 OP2 G B2426 83.846 136.233 123.333 1.00 39.32 O
ATOM 5 O5' G B2426 86.076 136.192 124.407 1.00 37.44 O
ATOM 6 C5' G B2426 87.383 136.727 124.670 1.00 35.48 C
ATOM 7 C4' G B2426 88.390 135.609 124.736 1.00 34.40 C
ATOM 8 O4' G B2426 88.128 134.776 125.897 1.00 34.70 O
ATOM 9 C3' G B2426 88.314 134.631 123.582 1.00 34.73 C
ATOM 10 O3' G B2426 88.934 135.130 122.406 1.00 36.16 O
ATOM 11 C2' G B2426 88.979 133.397 124.169 1.00 33.13 C
ATOM 12 O2' G B2426 90.383 133.510 124.240 1.00 30.90 O
ATOM 13 C1' G B2426 88.412 133.418 125.586 1.00 33.70 C
ATOM 14 N9 G B2426 87.173 132.652 125.701 1.00 34.46 N
ATOM 15 C8 G B2426 85.897 133.152 125.768 1.00 35.16 C
ATOM 16 N7 G B2426 84.987 132.222 125.874 1.00 36.01 N
ATOM 17 C5 G B2426 85.704 131.036 125.872 1.00 34.82 C
ATOM 18 C6 G B2426 85.257 129.702 125.964 1.00 35.39 C
ATOM 19 O6 G B2426 84.102 129.287 126.063 1.00 39.30 O
ATOM 20 N1 G B2426 86.314 128.803 125.933 1.00 35.26 N
ATOM 21 C2 G B2426 87.636 129.142 125.823 1.00 34.20 C
ATOM 22 N2 G B2426 88.509 128.121 125.816 1.00 32.76 N
ATOM 23 N3 G B2426 88.070 130.388 125.730 1.00 34.82 N
ATOM 24 C4 G B2426 87.054 131.280 125.764 1.00 34.90 C
ATOM 25 P U B2427 88.352 134.708 120.971 1.00 33.82 P
ATOM 26 OP1 U B2427 89.037 135.527 119.934 1.00 30.70 O
ATOM 27 OP2 U B2427 86.872 134.719 121.062 1.00 32.64 O
ATOM 28 O5' U B2427 88.837 133.203 120.817 1.00 31.94 O
TER
Atoms:
OP1: (93.678,128.028,127.613)
OP2: (94.819,130.175,128.440)
C3': (93.458,129.379,123.939)
C1': (93.208,131.602,123.219)
C5': (91.930,129.877,125.934)
O6: (94.372,137.440,122.424)
O4': (92.071,131.314,124.006)
C8: (93.841,133.707,124.489)
C2: (93.380,134.798,120.279)
C6: (94.027,136.299,122.097)
C5: (93.894,135.140,122.912)
C4: (93.547,133.946,122.319)
P: (93.615,129.486,127.913)
C4': (92.132,129.933,124.447)
C2': (94.280,130.646,123.725)
O2': (95.299,130.502,122.760)
N1: (93.730,136.026,120.771)
N2: (93.131,134.748,118.963)
N3: (93.281,133.702,121.018)
N7: (94.067,134.976,124.280)
N9: (93.522,133.022,123.343)
O5': (93.134,130.265,126.612)
O3': (93.246,128.749,122.688)
OP2: (94.819,130.175,128.440)
C3': (93.458,129.379,123.939)
C1': (93.208,131.602,123.219)
C5': (91.930,129.877,125.934)
O6: (94.372,137.440,122.424)
O4': (92.071,131.314,124.006)
C8: (93.841,133.707,124.489)
C2: (93.380,134.798,120.279)
C6: (94.027,136.299,122.097)
C5: (93.894,135.140,122.912)
C4: (93.547,133.946,122.319)
P: (93.615,129.486,127.913)
C4': (92.132,129.933,124.447)
C2': (94.280,130.646,123.725)
O2': (95.299,130.502,122.760)
N1: (93.730,136.026,120.771)
N2: (93.131,134.748,118.963)
N3: (93.281,133.702,121.018)
N7: (94.067,134.976,124.280)
N9: (93.522,133.022,123.343)
O5': (93.134,130.265,126.612)
O3': (93.246,128.749,122.688)
OP1: (85.432,138.236,123.084)
OP2: (83.846,136.233,123.333)
C3': (88.314,134.631,123.582)
C1': (88.412,133.418,125.586)
C5': (87.383,136.727,124.670)
O6: (84.102,129.287,126.063)
O4': (88.128,134.776,125.897)
C8: (85.897,133.152,125.768)
C2: (87.636,129.142,125.823)
C6: (85.257,129.702,125.964)
C5: (85.704,131.036,125.872)
C4: (87.054,131.280,125.764)
P: (84.888,137.122,123.903)
C4': (88.390,135.609,124.736)
C2': (88.979,133.397,124.169)
O2': (90.383,133.510,124.240)
N1: (86.314,128.803,125.933)
N2: (88.509,128.121,125.816)
N3: (88.070,130.388,125.730)
N7: (84.987,132.222,125.874)
N9: (87.173,132.652,125.701)
O5': (86.076,136.192,124.407)
O3': (88.934,135.130,122.406)
OP2: (83.846,136.233,123.333)
C3': (88.314,134.631,123.582)
C1': (88.412,133.418,125.586)
C5': (87.383,136.727,124.670)
O6: (84.102,129.287,126.063)
O4': (88.128,134.776,125.897)
C8: (85.897,133.152,125.768)
C2: (87.636,129.142,125.823)
C6: (85.257,129.702,125.964)
C5: (85.704,131.036,125.872)
C4: (87.054,131.280,125.764)
P: (84.888,137.122,123.903)
C4': (88.390,135.609,124.736)
C2': (88.979,133.397,124.169)
O2': (90.383,133.510,124.240)
N1: (86.314,128.803,125.933)
N2: (88.509,128.121,125.816)
N3: (88.070,130.388,125.730)
N7: (84.987,132.222,125.874)
N9: (87.173,132.652,125.701)
O5': (86.076,136.192,124.407)
O3': (88.934,135.130,122.406)
Image (generated by PyMOL):